Charlie Boone - Publications

Molecular and Medical Genetics University of Toronto, Toronto, ON, Canada 
Genetics, Microbiology Biology, Molecular Biology, Cell Biology

247 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 van Leeuwen J, Pons C, Tan G, Wang JZ, Hou J, Weile J, Gebbia M, Liang W, Shuteriqi E, Li Z, Lopes M, Ušaj M, Dos Santos Lopes A, van Lieshout N, Myers CL, ... ... Boone C, et al. Systematic analysis of bypass suppression of essential genes. Molecular Systems Biology. 16: e9828. PMID 32939983 DOI: 10.15252/Msb.20209828  1
2020 Masinas MPD, Mattiazzi Usaj M, Usaj M, Boone C, Andrews BJ. A Database for Visualizing and Mining High-Content Cell Imaging Projects. G3 (Bethesda, Md.). PMID 32934016 DOI: 10.1534/G3.120.401570  1
2020 Kuzmin E, VanderSluis B, Nguyen Ba AN, Wang W, Koch EN, Usaj M, Khmelinskii A, Usaj MM, van Leeuwen J, Kraus O, Tresenrider A, Pryszlak M, Hu MC, Varriano B, Costanzo M, ... ... Boone C, et al. Exploring whole-genome duplicate gene retention with complex genetic interaction analysis. Science (New York, N.Y.). 368. PMID 32586993 DOI: 10.1126/Science.Aaz5667  1
2020 Fisher MC, Gurr SJ, Cuomo CA, Blehert DS, Jin H, Stukenbrock EH, Stajich JE, Kahmann R, Boone C, Denning DW, Gow NAR, Klein BS, Kronstad JW, Sheppard DC, Taylor JW, et al. Threats Posed by the Fungal Kingdom to Humans, Wildlife, and Agriculture. Mbio. 11. PMID 32371596 DOI: 10.1128/Mbio.00449-20  1
2020 Eisenstatt JR, Boeckmann L, Au WC, Garcia V, Bursch L, Ocampo J, Costanzo M, Weinreich M, Sclafani RA, Baryshnikova A, Myers CL, Boone C, Clark DJ, Baker R, Basrai MA. Dbf4-Dependent Kinase (DDK)-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A in . G3 (Bethesda, Md.). PMID 32295767 DOI: 10.1534/G3.120.401131  1
2020 Zhou FL, Li SC, Zhu Y, Guo WJ, Shao LJ, Nelson J, Simpkins S, Yang DH, Liu Q, Yashiroda Y, Xu JB, Fan YY, Yue JM, Yoshida M, Xia T, ... ... Boone C, et al. Publisher Correction: Integrating yeast chemical genomics and mammalian cell pathway analysis. Acta Pharmacologica Sinica. PMID 32081979 DOI: 10.1038/S41401-019-0355-0  1
2020 Mattiazzi Usaj M, Sahin N, Friesen H, Pons C, Usaj M, Masinas MPD, Shuteriqi E, Shkurin A, Aloy P, Morris Q, Boone C, Andrews BJ. Systematic genetics and single-cell imaging reveal widespread morphological pleiotropy and cell-to-cell variability. Molecular Systems Biology. 16: e9243. PMID 32064787 DOI: 10.15252/Msb.20199243  1
2020 Au WC, Zhang T, Mishra PK, Eisenstatt JR, Walker RL, Ocampo J, Dawson A, Warren J, Costanzo M, Baryshnikova A, Flick K, Clark DJ, Meltzer PS, Baker RE, Myers C, ... Boone C, et al. Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast. Plos Genetics. 16: e1008597. PMID 32032354 DOI: 10.1371/Journal.Pgen.1008597  1
2019 Fang G, Wang W, Paunic V, Heydari H, Costanzo M, Liu X, Liu X, VanderSluis B, Oately B, Steinbach M, Van Ness B, Schadt EE, Pankratz ND, Boone C, Kumar V, et al. Discovering genetic interactions bridging pathways in genome-wide association studies. Nature Communications. 10: 4274. PMID 31537791 DOI: 10.1038/S41467-019-12131-7  1
2019 de Paula E Silva ACA, de Oliveira HC, Scorzoni L, Marcos CM, Dos Santos CT, Fusco-Almeida AM, Salina ACG, Medeiros AI, Almeida F, Li SC, Boone C, Mendes-Giannini MJS. Decyl gallate as a possible inhibitor of N-glycosylation process in . Antimicrobial Agents and Chemotherapy. PMID 31451502 DOI: 10.1128/Aac.01909-18  1
2019 Zhou FL, Li SC, Zhu Y, Guo WJ, Shao LJ, Nelson J, Simpkins S, Yang DH, Liu Q, Yashiroda Y, Xu JB, Fan YY, Yue JM, Yoshida M, Xia T, ... ... Boone C, et al. Integrating yeast chemical genomics and mammalian cell pathway analysis. Acta Pharmacologica Sinica. PMID 31138898 DOI: 10.1038/S41401-019-0231-Y  1
2019 Mair B, Moffat J, Boone C, Andrews BJ. Genetic interaction networks in cancer cells. Current Opinion in Genetics & Development. 54: 64-72. PMID 30974317 DOI: 10.1016/J.Gde.2019.03.002  1
2019 Costanzo M, Kuzmin E, van Leeuwen J, Mair B, Moffat J, Boone C, Andrews B. Global Genetic Networks and the Genotype-to-Phenotype Relationship. Cell. 177: 85-100. PMID 30901552 DOI: 10.1016/J.Cell.2019.01.033  1
2019 Hou J, Tan G, Fink GR, Andrews BJ, Boone C. Complex modifier landscape underlying genetic background effects. Proceedings of the National Academy of Sciences of the United States of America. PMID 30804202 DOI: 10.1073/Pnas.1820915116  1
2019 Pascoe N, Seetharaman A, Teyra J, Manczyk N, Satori MA, Tjandra D, Makhnevych T, Schwerdtfeger C, Brasher BB, Moffat J, Costanzo M, Boone C, Sicheri F, Sidhu S. Yeast Two-Hybrid Analysis for Ubiquitin-Variant Inhibitors of Human Deubiquitinases. Journal of Molecular Biology. PMID 30763569 DOI: 10.1016/J.Jmb.2019.02.007  1
2019 Simpkins SW, Deshpande R, Nelson J, Li SC, Piotrowski JS, Ward HN, Yashiroda Y, Osada H, Yoshida M, Boone C, Myers CL. Using BEAN-counter to quantify genetic interactions from multiplexed barcode sequencing experiments. Nature Protocols. PMID 30635653 DOI: 10.1038/S41596-018-0099-1  1
2018 Simpkins SW, Nelson J, Deshpande R, Li SC, Piotrowski JS, Wilson EH, Gebre AA, Safizadeh H, Okamoto R, Yoshimura M, Costanzo M, Yashiroda Y, Ohya Y, Osada H, Yoshida M, ... Boone C, et al. Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interactions. Plos Computational Biology. 14: e1006532. PMID 30376562 DOI: 10.1371/Journal.Pcbi.1006532  1
2018 Corcoles-Saez I, Dong K, Johnson AL, Waskiewicz E, Costanzo M, Boone C, Cha RS. Essential Function of Mec1, the Budding Yeast ATM/ATR Checkpoint-Response Kinase, in Protein Homeostasis. Developmental Cell. 46: 495-503.e2. PMID 30130531 DOI: 10.1016/J.Devcel.2018.07.011  1
2018 VanderSluis B, Costanzo M, Billmann M, Ward HN, Myers CL, Andrews BJ, Boone C. Integrating genetic and protein-protein interaction networks maps a functional wiring diagram of a cell. Current Opinion in Microbiology. 45: 170-179. PMID 30059827 DOI: 10.1016/J.Mib.2018.06.004  1
2018 Ciftci-Yilmaz S, Au WC, Mishra PK, Eisenstatt JR, Chang J, Dawson AR, Zhu I, Rahman M, Bilke S, Costanzo M, Baryshnikova A, Myers CL, Meltzer PS, Landsman D, Baker RE, ... Boone C, et al. A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A. Genetics. PMID 30012561 DOI: 10.1534/Genetics.118.301305  1
2018 Hou J, van Leeuwen J, Andrews BJ, Boone C. Genetic Network Complexity Shapes Background-Dependent Phenotypic Expression. Trends in Genetics : Tig. PMID 29903533 DOI: 10.1016/J.Tig.2018.05.006  1
2018 Sing TL, Hung MP, Ohnuki S, Suzuki G, San Luis BJ, McClain M, Unruh JR, Yu Z, Ou J, Marshall-Sheppard J, Huh WK, Costanzo M, Boone C, Ohya Y, Jaspersen SL, et al. The budding yeast RSC complex maintains ploidy by promoting spindle pole body insertion. The Journal of Cell Biology. PMID 29875260 DOI: 10.1083/Jcb.201709009  1
2018 Mount HO, Revie NM, Todd RT, Anstett K, Collins C, Costanzo M, Boone C, Robbins N, Selmecki A, Cowen LE. Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs. Plos Genetics. 14: e1007319. PMID 29702647 DOI: 10.1371/Journal.Pgen.1007319  1
2018 Kuzmin E, VanderSluis B, Wang W, Tan G, Deshpande R, Chen Y, Usaj M, Balint A, Mattiazzi Usaj M, van Leeuwen J, Koch EN, Pons C, Dagilis AJ, Pryszlak M, Wang JZY, ... ... Boone C, et al. Systematic analysis of complex genetic interactions. Science (New York, N.Y.). 360. PMID 29674565 DOI: 10.1126/Science.Aao1729  1
2018 Kayatekin C, Amasino A, Gaglia G, Flannick J, Bonner JM, Fanning S, Narayan P, Barrasa MI, Pincus D, Landgraf D, Nelson J, Hesse WR, Costanzo M, Myers CL, ... Boone C, et al. Translocon Declogger Ste24 Protects against IAPP Oligomer-Induced Proteotoxicity. Cell. PMID 29526462 DOI: 10.1016/J.Cell.2018.02.026  1
2018 Shin M, van Leeuwen J, Boone C, Bretscher A. Yeast Aim21/Tda2 both regulates free actin by reducing barbed end assembly and forms a complex with Cap1/Cap2 to balance actin assembly between patches and cables. Molecular Biology of the Cell. PMID 29467252 DOI: 10.1091/Mbc.E17-10-0592  1
2017 van Leeuwen J, Boone C, Andrews BJ. Mapping a diversity of genetic interactions in yeast. Current Opinion in Systems Biology. 6: 14-21. PMID 30505984 DOI: 10.1016/J.Coisb.2017.08.002  1
2017 Nelson J, Simpkins SW, Safizadeh H, Li SC, Piotrowski JS, Hirano H, Yashiroda Y, Osada H, Yoshida M, Boone C, Myers CL. MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action. Bioinformatics (Oxford, England). PMID 29206899 DOI: 10.1093/Bioinformatics/Btx732  1
2017 Wang W, Xu ZZ, Costanzo M, Boone C, Lange CA, Myers CL. Pathway-based discovery of genetic interactions in breast cancer. Plos Genetics. 13: e1006973. PMID 28957314 DOI: 10.1371/Journal.Pgen.1006973  1
2017 Rizzolo K, Huen J, Kumar A, Phanse S, Vlasblom J, Kakihara Y, Zeineddine HA, Minic Z, Snider J, Wang W, Pons C, Seraphim TV, Boczek EE, Alberti S, Costanzo M, ... ... Boone C, et al. Features of the Chaperone Cellular Network Revealed through Systematic Interaction Mapping. Cell Reports. 20: 2735-2748. PMID 28903051 DOI: 10.1016/J.Celrep.2017.08.074  1
2017 Xie JL, Qin L, Miao Z, Grys BT, Diaz JC, Ting K, Krieger JR, Tong J, Tan K, Leach MD, Ketela T, Moran MF, Krysan DJ, Boone C, Andrews BJ, et al. The Candida albicans transcription factor Cas5 couples stress responses, drug resistance and cell cycle regulation. Nature Communications. 8: 499. PMID 28894103 DOI: 10.1038/S41467-017-00547-Y  1
2017 Piotrowski JS, Li SC, Deshpande R, Simpkins SW, Nelson J, Yashiroda Y, Barber JM, Safizadeh H, Wilson E, Okada H, Gebre AA, Kubo K, Torres NP, LeBlanc MA, Andrusiak K, ... ... Boone C, et al. Functional annotation of chemical libraries across diverse biological processes. Nature Chemical Biology. PMID 28759014 DOI: 10.1038/Nchembio.2436  1
2017 Hart T, Tong AHY, Chan K, Van Leeuwen J, Seetharaman A, Aregger M, Chandrashekhar M, Hustedt N, Seth S, Noonan A, Habsid A, Sizova O, Nedyalkova L, Climie R, Tworzyanski L, ... ... Boone C, et al. Evaluation and Design of Genome-Wide CRISPR/SpCas9 Knockout Screens. G3 (Bethesda, Md.). PMID 28655737 DOI: 10.1534/G3.117.041277  1
2017 van Leeuwen J, Pons C, Boone C, Andrews BJ. Mechanisms of suppression: The wiring of genetic resilience. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 28582599 DOI: 10.1002/Bies.201700042  1
2017 Yang F, Sun S, Tan G, Costanzo M, Hill DE, Vidal M, Andrews BJ, Boone C, Roth FP. Identifying pathogenicity of human variants via paralog-based yeast complementation. Plos Genetics. 13: e1006779. PMID 28542158 DOI: 10.1371/Journal.Pgen.1006779  1
2017 Kraus OZ, Grys BT, Ba J, Chong Y, Frey BJ, Boone C, Andrews BJ. Automated analysis of high-content microscopy data with deep learning. Molecular Systems Biology. 13: 924. PMID 28420678 DOI: 10.15252/Msb.20177551  1
2017 Usaj M, Tan Y, Wang W, VanderSluis B, Zou A, Myers CL, Costanzo M, Andrews B, Boone C. A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network. G3 (Bethesda, Md.). PMID 28325812 DOI: 10.1534/G3.117.040220  1
2017 Khurana V, Peng J, Chung CY, Auluck PK, Fanning S, Tardiff DF, Bartels T, Koeva M, Eichhorn SW, Benyamini H, Lou Y, Nutter-Upham A, Baru V, Freyzon Y, Tuncbag N, ... ... Boone C, et al. Genome-Scale Networks Link Neurodegenerative Disease Genes to α-Synuclein through Specific Molecular Pathways. Cell Systems. PMID 28131822 DOI: 10.1016/J.Cels.2016.12.011  1
2016 Grys BT, Lo DS, Sahin N, Kraus OZ, Morris Q, Boone C, Andrews BJ. Machine learning and computer vision approaches for phenotypic profiling. The Journal of Cell Biology. PMID 27940887 DOI: 10.1083/Jcb.201610026  1
2016 Kyriakou D, Stavrou E, Demosthenous P, Angelidou G, San Luis BJ, Boone C, Promponas VJ, Kirmizis A. Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae. Bmc Biology. 14: 106. PMID 27927215 DOI: 10.1186/S12915-016-0325-7  0.01
2016 Shyian M, Mattarocci S, Albert B, Hafner L, Lezaja A, Costanzo M, Boone C, Shore D. Budding Yeast Rif1 Controls Genome Integrity by Inhibiting rDNA Replication. Plos Genetics. 12: e1006414. PMID 27820830 DOI: 10.1371/Journal.Pgen.1006414  1
2016 van Leeuwen J, Pons C, Mellor JC, Yamaguchi TN, Friesen H, Koschwanez J, Ušaj MM, Pechlaner M, Takar M, Ušaj M, VanderSluis B, Andrusiak K, Bansal P, Baryshnikova A, Boone CE, ... ... Boone C, et al. Exploring genetic suppression interactions on a global scale. Science (New York, N.Y.). 354. PMID 27811238 DOI: 10.1126/Science.Aag0839  1
2016 Costanzo M, VanderSluis B, Koch EN, Baryshnikova A, Pons C, Tan G, Wang W, Usaj M, Hanchard J, Lee SD, Pelechano V, Styles EB, Billmann M, van Leeuwen J, van Dyk N, ... ... Boone C, et al. A global genetic interaction network maps a wiring diagram of cellular function. Science (New York, N.Y.). 353. PMID 27708008 DOI: 10.1126/Science.Aaf1420  1
2016 Styles EB, Founk KJ, Zamparo LA, Sing TL, Altintas D, Ribeyre C, Ribaud V, Rougemont J, Mayhew D, Costanzo M, Usaj M, Verster AJ, Koch EN, Novarina D, Graf M, ... ... Boone C, et al. Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci. Cell Systems. PMID 27617677 DOI: 10.1016/J.Cels.2016.08.008  1
2016 Jin L, Ham JH, Hage R, Zhao W, Soto-Hernández J, Lee SY, Paek SM, Kim MG, Boone C, Coplin DL, Mackey D. Direct and Indirect Targeting of PP2A by Conserved Bacterial Type-III Effector Proteins. Plos Pathogens. 12: e1005609. PMID 27191168 DOI: 10.1371/Journal.Ppat.1005609  1
2016 Mattiazzi Usaj M, Styles EB, Verster AJ, Friesen H, Boone C, Andrews BJ. High-Content Screening for Quantitative Cell Biology. Trends in Cell Biology. PMID 27118708 DOI: 10.1016/J.Tcb.2016.03.008  1
2016 Styles EB, Friesen H, Boone C, Andrews BJ. High-Throughput Microscopy-Based Screening in Saccharomyces cerevisiae. Cold Spring Harbor Protocols. 2016: pdb.top087593. PMID 27037080 DOI: 10.1101/Pdb.Top087593  1
2016 Kuzmin E, Costanzo M, Andrews B, Boone C. Synthetic Genetic Arrays: Automation of Yeast Genetics. Cold Spring Harbor Protocols. 2016: pdb.top086652. PMID 27037078 DOI: 10.1101/Pdb.Top086652  1
2016 Kuzmin E, Costanzo M, Andrews B, Boone C. Synthetic Genetic Array Analysis. Cold Spring Harbor Protocols. 2016: pdb.prot088807. PMID 27037072 DOI: 10.1101/Pdb.Prot088807  1
2016 Cox MJ, Chong YT, Boone C, Andrews B. Liquid Growth of Arrayed Fluorescently Tagged Saccharomyces cerevisiae Strains for Live-Cell High-Throughput Microscopy Screens. Cold Spring Harbor Protocols. 2016: pdb.prot088799. PMID 27037071 DOI: 10.1101/Pdb.Prot088799  1
2016 Sun S, Yang F, Tan G, Costanzo M, Oughtred R, Hirschman J, Theesfeld C, Bansal P, Sahni N, Yi S, Yu A, Tyagi T, Tie C, Hill DE, Vidal M, ... Boone C, et al. An extended set of yeast-based functional assays accurately identifies human disease mutations. Genome Research. PMID 26975778 DOI: 10.1101/Gr.192526.115  1
2016 Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, Sun S, Yang F, Shen YA, Murray RR, Spirohn K, Begg BE, Duran-Frigola M, MacWilliams A, Pevzner SJ, ... Boone C, et al. Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing. Cell. 164: 805-817. PMID 26871637 DOI: 10.1016/J.Cell.2016.01.029  1
2016 Dodgson SE, Kim S, Costanzo M, Baryshnikova A, Morse DL, Kaiser CA, Boone C, Amon A. Chromosome-Specific and Global Effects of Aneuploidy in Saccharomyces cerevisiae. Genetics. PMID 26837754 DOI: 10.1534/Genetics.115.185660  1
2016 Dickinson Q, Bottoms S, Hinchman L, McIlwain S, Li S, Myers CL, Boone C, Coon JJ, Hebert A, Sato TK, Landick R, Piotrowski JS. Mechanism of imidazolium ionic liquids toxicity in Saccharomyces cerevisiae and rational engineering of a tolerant, xylose-fermenting strain. Microbial Cell Factories. 15: 17. PMID 26790958 DOI: 10.1186/S12934-016-0417-7  1
2016 Yerlikaya S, Meusburger M, Kumari R, Huber A, Anrather D, Costanzo M, Boone C, Ammerer G, Baranov PV, Loewith R. TORC1 and TORC2 work together to regulate ribosomal protein S6 phosphorylation in Saccharomyces cerevisiae. Molecular Biology of the Cell. 27: 397-409. PMID 26582391 DOI: 10.1091/Mbc.E15-08-0594  1
2015 Mann PA, McLellan CA, Koseoglu S, Si Q, Kuzmin E, Flattery A, Harris G, Sher X, Murgolo N, Wang H, Devito K, de Pedro N, Genilloud O, Kahn JN, Jiang B, ... Boone C, et al. Chemical Genomics-Based Antifungal Drug Discovery: Targeting Glycosylphosphatidylinositol (GPI) Precursor Biosynthesis. Acs Infectious Diseases. 1: 59-72. PMID 26878058 DOI: 10.1021/Id5000212  1
2015 Boone C, Andrews BJ. HUMAN GENOME. The indispensable genome. Science (New York, N.Y.). 350: 1028-9. PMID 26612934 DOI: 10.1126/Science.Aad7925  1
2015 Serate J, Xie D, Pohlmann E, Donald C, Shabani M, Hinchman L, Higbee A, Mcgee M, La Reau A, Klinger GE, Li S, Myers CL, Boone C, Bates DM, Cavalier D, et al. Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation. Biotechnology For Biofuels. 8: 180. PMID 26583044 DOI: 10.1186/S13068-015-0356-2  1
2015 Becker JR, Pons C, Nguyen HD, Costanzo M, Boone C, Myers CL, Bielinsky AK. Genetic Interactions Implicating Postreplicative Repair in Okazaki Fragment Processing. Plos Genetics. 11: e1005659. PMID 26545110 DOI: 10.1371/Journal.Pgen.1005659  1
2015 van Leeuwen J, Andrews B, Boone C, Tan G. Construction of Multifragment Plasmids by Homologous Recombination in Yeast. Cold Spring Harbor Protocols. 2015: pdb.top084111. PMID 26330631 DOI: 10.1101/Pdb.Top084111  1
2015 van Leeuwen J, Andrews B, Boone C, Tan G. Rapid and Efficient Plasmid Construction by Homologous Recombination in Yeast. Cold Spring Harbor Protocols. 2015: pdb.prot085100. PMID 26330622 DOI: 10.1101/Pdb.Prot085100  1
2015 Koh JL, Chong YT, Friesen H, Moses A, Boone C, Andrews BJ, Moffat J. CYCLoPs: A Comprehensive Database Constructed from Automated Analysis of Protein Abundance and Subcellular Localization Patterns in Saccharomyces cerevisiae. G3 (Bethesda, Md.). 5: 1223-32. PMID 26048563 DOI: 10.1534/G3.115.017830  1
2015 Chong YT, Koh JL, Friesen H, Duffy K, Cox MJ, Moses A, Moffat J, Boone C, Andrews BJ. Yeast Proteome Dynamics from Single Cell Imaging and Automated Analysis. Cell. 161: 1413-24. PMID 26046442 DOI: 10.1016/J.Cell.2015.04.051  1
2015 Chaillot J, Tebbji F, Remmal A, Boone C, Brown GW, Bellaoui M, Sellam A. The monoterpene carvacrol generates endoplasmic reticulum stress in the pathogenic fungus Candida albicans. Antimicrobial Agents and Chemotherapy. PMID 26014932 DOI: 10.1128/Aac.00551-15  1
2015 Piotrowski JS, Okada H, Lu F, Li SC, Hinchman L, Ranjan A, Smith DL, Higbee AJ, Ulbrich A, Coon JJ, Deshpande R, Bukhman YV, McIlwain S, Ong IM, Myers CL, Boone C, et al. Plant-derived antifungal agent poacic acid targets β-1,3-glucan. Proceedings of the National Academy of Sciences of the United States of America. 112: E1490-7. PMID 25775513 DOI: 10.1073/Pnas.1410400112  0.01
2015 Hendry JA, Tan G, Ou J, Boone C, Brown GW. Leveraging DNA damage response signaling to identify yeast genes controlling genome stability. G3 (Bethesda, Md.). 5: 997-1006. PMID 25721128 DOI: 10.1534/G3.115.016576  1
2015 Piotrowski JS, Simpkins SW, Li SC, Deshpande R, McIlwain SJ, Ong IM, Myers CL, Boone C, Andersen RJ. Chemical genomic profiling via barcode sequencing to predict compound mode of action. Methods in Molecular Biology (Clifton, N.J.). 1263: 299-318. PMID 25618354 DOI: 10.1007/978-1-4939-2269-7_23  1
2015 Ren L, Willet AH, Roberts-Galbraith RH, McDonald NA, Feoktistova A, Chen JS, Huang H, Guillen R, Boone C, Sidhu SS, Beckley JR, Gould KL. The Cdc15 and Imp2 SH3 domains cooperatively scaffold a network of proteins that redundantly ensure efficient cell division in fission yeast. Molecular Biology of the Cell. 26: 256-69. PMID 25428987 DOI: 10.1091/Mbc.E14-10-1451  1
2014 Khmelinskii A, Blaszczak E, Pantazopoulou M, Fischer B, Omnus DJ, Le Dez G, Brossard A, Gunnarsson A, Barry JD, Meurer M, Kirrmaier D, Boone C, Huber W, Rabut G, Ljungdahl PO, et al. Protein quality control at the inner nuclear membrane. Nature. 516: 410-3. PMID 25519137 DOI: 10.1038/Nature14096  1
2014 Boone C. Yeast systems biology: our best shot at modeling a cell. Genetics. 198: 435-7. PMID 25316779 DOI: 10.1534/Genetics.114.169128  1
2014 Kuzmin E, Sharifpoor S, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C. Synthetic genetic array analysis for global mapping of genetic networks in yeast. Methods in Molecular Biology (Clifton, N.J.). 1205: 143-68. PMID 25213244 DOI: 10.1007/978-1-4939-1363-3_10  1
2014 Aiken J, Sept D, Costanzo M, Boone C, Cooper JA, Moore JK. Genome-wide analysis reveals novel and discrete functions for tubulin carboxy-terminal tails. Current Biology : Cb. 24: 1295-303. PMID 24835459 DOI: 10.1016/J.Cub.2014.03.078  1
2014 Parts L, Liu YC, Tekkedil MM, Steinmetz LM, Caudy AA, Fraser AG, Boone C, Andrews BJ, Rosebrock AP. Heritability and genetic basis of protein level variation in an outbred population. Genome Research. 24: 1363-70. PMID 24823668 DOI: 10.1101/Gr.170506.113  1
2014 Fung SY, Sofiyev V, Schneiderman J, Hirschfeld AF, Victor RE, Woods K, Piotrowski JS, Deshpande R, Li SC, de Voogd NJ, Myers CL, Boone C, Andersen RJ, Turvey SE. Unbiased screening of marine sponge extracts for anti-inflammatory agents combined with chemical genomics identifies girolline as an inhibitor of protein synthesis. Acs Chemical Biology. 9: 247-57. PMID 24117378 DOI: 10.1021/Cb400740C  1
2013 Vizeacoumar FJ, Arnold R, Vizeacoumar FS, Chandrashekhar M, Buzina A, Young JT, Kwan JH, Sayad A, Mero P, Lawo S, Tanaka H, Brown KR, Baryshnikova A, Mak AB, Fedyshyn Y, ... Boone C, et al. A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities. Molecular Systems Biology. 9: 696. PMID 24104479 DOI: 10.1038/Msb.2013.54  1
2013 Deshpande R, Asiedu MK, Klebig M, Sutor S, Kuzmin E, Nelson J, Piotrowski J, Shin SH, Yoshida M, Costanzo M, Boone C, Wigle DA, Myers CL. A comparative genomic approach for identifying synthetic lethal interactions in human cancer. Cancer Research. 73: 6128-36. PMID 23980094 DOI: 10.1158/0008-5472.Can-12-3956  1
2013 Baryshnikova A, VanderSluis B, Costanzo M, Myers CL, Cha RS, Andrews B, Boone C. Global linkage map connects meiotic centromere function to chromosome size in budding yeast. G3 (Bethesda, Md.). 3: 1741-51. PMID 23979930 DOI: 10.1534/G3.113.007377  1
2013 Porcu G, Parsons AB, Di Giandomenico D, Lucisano G, Mosca MG, Boone C, Ragnini-Wilson A. Combined p21-activated kinase and farnesyltransferase inhibitor treatment exhibits enhanced anti-proliferative activity on melanoma, colon and lung cancer cell lines. Molecular Cancer. 12: 88. PMID 23915247 DOI: 10.1186/1476-4598-12-88  1
2013 Snider J, Hanif A, Lee ME, Jin K, Yu AR, Graham C, Chuk M, Damjanovic D, Wierzbicka M, Tang P, Balderes D, Wong V, Jessulat M, Darowski KD, San Luis BJ, ... Boone C, et al. Mapping the functional yeast ABC transporter interactome. Nature Chemical Biology. 9: 565-72. PMID 23831759 DOI: 10.1038/Nchembio.1293  1
2013 Nguyen HD, Becker J, Thu YM, Costanzo M, Koch EN, Smith S, Myung K, Myers CL, Boone C, Bielinsky AK. Unligated Okazaki Fragments Induce PCNA Ubiquitination and a Requirement for Rad59-Dependent Replication Fork Progression. Plos One. 8: e66379. PMID 23824283 DOI: 10.1371/Journal.Pone.0066379  1
2013 Baryshnikova A, Costanzo M, Myers CL, Andrews B, Boone C. Genetic interaction networks: toward an understanding of heritability. Annual Review of Genomics and Human Genetics. 14: 111-33. PMID 23808365 DOI: 10.1146/Annurev-Genom-082509-141730  1
2013 Marcotte E, Boone C, Babu MM, Gavin AC. Network Biology editorial 2013. Molecular Biosystems. 9: 1557-8. PMID 23712464 DOI: 10.1039/C3Mb90018E  1
2013 Freisinger T, Klünder B, Johnson J, Müller N, Pichler G, Beck G, Costanzo M, Boone C, Cerione RA, Frey E, Wedlich-Söldner R. Establishment of a robust single axis of cell polarity by coupling multiple positive feedback loops. Nature Communications. 4: 1807. PMID 23651995 DOI: 10.1038/Ncomms2795  1
2013 Xin X, Gfeller D, Cheng J, Tonikian R, Sun L, Guo A, Lopez L, Pavlenco A, Akintobi A, Zhang Y, Rual JF, Currell B, Seshagiri S, Hao T, Yang X, ... Boone C, et al. SH3 interactome conserves general function over specific form. Molecular Systems Biology. 9: 652. PMID 23549480 DOI: 10.1038/Msb.2013.9  1
2013 Srikumar T, Lewicki MC, Costanzo M, Tkach JM, van Bakel H, Tsui K, Johnson ES, Brown GW, Andrews BJ, Boone C, Giaever G, Nislow C, Raught B. Global analysis of SUMO chain function reveals multiple roles in chromatin regulation. The Journal of Cell Biology. 201: 145-63. PMID 23547032 DOI: 10.1083/Jcb.201210019  1
2013 Yoshida M, Park SB, Boone C. Focus on chemical biology in Asia. Molecular Biosystems. 9: 825. PMID 23546016 DOI: 10.1039/C3Mb90008H  1
2013 Roemer T, Boone C. Systems-level antimicrobial drug and drug synergy discovery. Nature Chemical Biology. 9: 222-31. PMID 23508188 DOI: 10.1038/Nchembio.1205  1
2013 Michelot A, Grassart A, Okreglak V, Costanzo M, Boone C, Drubin DG. Actin filament elongation in Arp2/3-derived networks is controlled by three distinct mechanisms. Developmental Cell. 24: 182-95. PMID 23333351 DOI: 10.1016/J.Devcel.2012.12.008  1
2013 Boone C. Simplifying the author and reader experience. Molecular Biosystems. 9: 9. PMID 23168690 DOI: 10.1039/C2Mb90047E  1
2013 Asiedu MK, Deshpande R, Klebig M, Sutor S, Kuzmin E, Piotrowski J, Shin SH, Costanzo M, Boone C, Wigle DA, Myers CL. Abstract LB-234: A comparative genomic approach for identifying synthetic lethal interactions in human cancer. Cancer Research. 73. DOI: 10.1158/1538-7445.Am2013-Lb-234  1
2012 Shapiro RS, Ryan O, Boone C, Cowen LE. Regulatory circuitry governing morphogenesis in Saccharomyces cerevisiae and Candida albicans. Cell Cycle (Georgetown, Tex.). 11: 4294-5. PMID 23095675 DOI: 10.4161/Cc.22608  1
2012 Chin BL, Ryan O, Lewitter F, Boone C, Fink GR. Genetic variation in Saccharomyces cerevisiae: circuit diversification in a signal transduction network. Genetics. 192: 1523-32. PMID 23051644 DOI: 10.1534/Genetics.112.145573  1
2012 Douglas AC, Smith AM, Sharifpoor S, Yan Z, Durbic T, Heisler LE, Lee AY, Ryan O, Göttert H, Surendra A, van Dyk D, Giaever G, Boone C, Nislow C, Andrews BJ. Functional analysis with a barcoder yeast gene overexpression system. G3 (Bethesda, Md.). 2: 1279-89. PMID 23050238 DOI: 10.1534/G3.112.003400  1
2012 Orij R, Urbanus ML, Vizeacoumar FJ, Giaever G, Boone C, Nislow C, Brul S, Smits GJ. Genome-wide analysis of intracellular pH reveals quantitative control of cell division rate by pH(c) in Saccharomyces cerevisiae. Genome Biology. 13: R80. PMID 23021432 DOI: 10.1186/Gb-2012-13-9-R80  1
2012 Ryan O, Shapiro RS, Kurat CF, Mayhew D, Baryshnikova A, Chin B, Lin ZY, Cox MJ, Vizeacoumar F, Cheung D, Bahr S, Tsui K, Tebbji F, Sellam A, Istel F, ... ... Boone C, et al. Global gene deletion analysis exploring yeast filamentous growth. Science (New York, N.Y.). 337: 1353-6. PMID 22984072 DOI: 10.1126/Science.1224339  1
2012 Tkach JM, Yimit A, Lee AY, Riffle M, Costanzo M, Jaschob D, Hendry JA, Ou J, Moffat J, Boone C, Davis TN, Nislow C, Brown GW. Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nature Cell Biology. 14: 966-76. PMID 22842922 DOI: 10.1038/Ncb2549  1
2012 Koch EN, Costanzo M, Bellay J, Deshpande R, Chatfield-Reed K, Chua G, D'Urso G, Andrews BJ, Boone C, Myers CL. Conserved rules govern genetic interaction degree across species. Genome Biology. 13: R57. PMID 22747640 DOI: 10.1186/Gb-2012-13-7-R57  1
2012 Sun MG, Sikora M, Costanzo M, Boone C, Kim PM. Network evolution: rewiring and signatures of conservation in signaling. Plos Computational Biology. 8: e1002411. PMID 22438796 DOI: 10.1371/Journal.Pcbi.1002411  1
2012 Sharifpoor S, van Dyk D, Costanzo M, Baryshnikova A, Friesen H, Douglas AC, Youn JY, VanderSluis B, Myers CL, Papp B, Boone C, Andrews BJ. Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs. Genome Research. 22: 791-801. PMID 22282571 DOI: 10.1101/Gr.129213.111  1
2012 Andrusiak K, Piotrowski JS, Boone C. Chemical-genomic profiling: Systematic analysis of the cellular targets of bioactive molecules Bioorganic and Medicinal Chemistry. 20: 1952-1960. PMID 22261022 DOI: 10.1016/J.Bmc.2011.12.023  1
2012 Xin X, Boone C, Thierry-Mieg N. Mapping interactomes with high coverage and efficiency using the shifted transversal design. Methods of Molecular Biology. 812: 147-159. PMID 22218858 DOI: 10.1007/978-1-61779-455-1_8  1
2012 Boone C. Fostering interdisciplinary biology Molecular Biosystems. 8: 443-444. PMID 22212589 DOI: 10.1039/C1Mb90051J  1
2012 Anderson MJ, Barker SL, Boone C, Measday V. Identification of RCN1 and RSA3 as ethanol-tolerant genes in Saccharomyces cerevisiae using a high copy barcoded library. Fems Yeast Research. 12: 48-60. PMID 22093065 DOI: 10.1111/J.1567-1364.2011.00762.X  1
2012 Jin K, Li J, Vizeacoumar FS, Li Z, Min R, Zamparo L, Vizeacoumar FJ, Datti A, Andrews B, Boone C, Zhang Z. PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae. Nucleic Acids Research. 40: D687-94. PMID 22009677 DOI: 10.1093/Nar/Gkr827  1
2011 Cokol M, Chua HN, Tasan M, Mutlu B, Weinstein ZB, Suzuki Y, Nergiz ME, Costanzo M, Baryshnikova A, Giaever G, Nislow C, Myers CL, Andrews BJ, Boone C, Roth FP. Systematic exploration of synergistic drug pairs. Molecular Systems Biology. 7: 544. PMID 22068327 DOI: 10.1038/Msb.2011.71  1
2011 Liu C, van Dyk D, Choe V, Yan J, Majumder S, Costanzo M, Bao X, Boone C, Huo K, Winey M, Fisk H, Andrews B, Rao H. Ubiquitin ligase Ufd2 is required for efficient degradation of Mps1 kinase. The Journal of Biological Chemistry. 286: 43660-7. PMID 22045814 DOI: 10.1074/Jbc.M111.286229  1
2011 Reha-Krantz LJ, Siddique MS, Murphy K, Tam A, O'Carroll M, Lou S, Schultz A, Boone C. Drug-sensitive DNA polymerase δ reveals a role for mismatch repair in checkpoint activation in yeast. Genetics. 189: 1211-24. PMID 21926300 DOI: 10.1534/Genetics.111.131938  1
2011 Rabut G, Le Dez G, Verma R, Makhnevych T, Knebel A, Kurz T, Boone C, Deshaies RJ, Peter M. The TFIIH subunit Tfb3 regulates cullin neddylation. Molecular Cell. 43: 488-95. PMID 21816351 DOI: 10.1016/J.Molcel.2011.05.032  1
2011 Aitman TJ, Boone C, Churchill GA, Hengartner MO, Mackay TF, Stemple DL. The future of model organisms in human disease research. Nature Reviews. Genetics. 12: 575-82. PMID 21765459 DOI: 10.1038/Nrg3047  1
2011 Williams DE, Dalisay DS, Patrick BO, Matainaho T, Andrusiak K, Deshpande R, Myers CL, Piotrowski JS, Boone C, Yoshida M, Andersen RJ. Padanamides A and B, highly modified linear tetrapeptides produced in culture by a Streptomyces sp. isolated from a marine sediment. Organic Letters. 13: 3936-9. PMID 21749075 DOI: 10.1021/Ol2014494  1
2011 Zhu X, Zhang Y, Bjornsdottir G, Liu Z, Quan A, Costanzo M, Dávila López M, Westholm JO, Ronne H, Boone C, Gustafsson CM, Myers LC. Histone modifications influence mediator interactions with chromatin. Nucleic Acids Research. 39: 8342-54. PMID 21742760 DOI: 10.1093/Nar/Gkr551  1
2011 Bendaha H, Yu L, Touzani R, Souane R, Giaever G, Nislow C, Boone C, El Kadiri S, Brown GW, Bellaoui M. New azole antifungal agents with novel modes of action: synthesis and biological studies of new tridentate ligands based on pyrazole and triazole. European Journal of Medicinal Chemistry. 46: 4117-24. PMID 21723647 DOI: 10.1016/J.Ejmech.2011.06.012  1
2011 Bellay J, Atluri G, Sing TL, Toufighi K, Costanzo M, Ribeiro PS, Pandey G, Baller J, VanderSluis B, Michaut M, Han S, Kim P, Brown GW, Andrews BJ, Boone C, et al. Putting genetic interactions in context through a global modular decomposition. Genome Research. 21: 1375-87. PMID 21715556 DOI: 10.1101/Gr.117176.110  1
2011 Szappanos B, Kovács K, Szamecz B, Honti F, Costanzo M, Baryshnikova A, Gelius-Dietrich G, Lercher MJ, Jelasity M, Myers CL, Andrews BJ, Boone C, Oliver SG, Pál C, Papp B. An integrated approach to characterize genetic interaction networks in yeast metabolism. Nature Genetics. 43: 656-62. PMID 21623372 DOI: 10.1038/Ng.846  1
2011 Vaisica JA, Baryshnikova A, Costanzo M, Boone C, Brown GW. Mms1 and Mms22 stabilize the replisome during replication stress. Molecular Biology of the Cell. 22: 2396-408. PMID 21593207 DOI: 10.1091/Mbc.E10-10-0848  1
2011 Magtanong L, Ho CH, Barker SL, Jiao W, Baryshnikova A, Bahr S, Smith AM, Heisler LE, Choy JS, Kuzmin E, Andrusiak K, Kobylianski A, Li Z, Costanzo M, Basrai MA, ... ... Boone C, et al. Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell. Nature Biotechnology. 29: 505-11. PMID 21572441 DOI: 10.1038/Nbt.1855  1
2011 Finch AJ, Hilcenko C, Basse N, Drynan LF, Goyenechea B, Menne TF, González Fernández A, Simpson P, D'Santos CS, Arends MJ, Donadieu J, Bellanné-Chantelot C, Costanzo M, Boone C, McKenzie AN, et al. Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome. Genes & Development. 25: 917-29. PMID 21536732 DOI: 10.1101/Gad.623011  1
2011 Munkacsi AB, Chen FW, Brinkman MA, Higaki K, Gutiérrez GD, Chaudhari J, Layer JV, Tong A, Bard M, Boone C, Ioannou YA, Sturley SL. An "exacerbate-reverse" strategy in yeast identifies histone deacetylase inhibition as a correction for cholesterol and sphingolipid transport defects in human Niemann-Pick type C disease. The Journal of Biological Chemistry. 286: 23842-51. PMID 21489983 DOI: 10.1074/Jbc.M111.227645  1
2011 Li Z, Vizeacoumar FJ, Bahr S, Li J, Warringer J, Vizeacoumar FS, Min R, Vandersluis B, Bellay J, Devit M, Fleming JA, Stephens A, Haase J, Lin ZY, Baryshnikova A, ... ... Boone C, et al. Systematic exploration of essential yeast gene function with temperature-sensitive mutants. Nature Biotechnology. 29: 361-7. PMID 21441928 DOI: 10.1038/Nbt.1832  1
2011 Michaut M, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C, Bader GD. Protein complexes are central in the yeast genetic landscape. Plos Computational Biology. 7: e1001092. PMID 21390331 DOI: 10.1371/Journal.Pcbi.1001092  1
2011 Arita Y, Nishimura S, Matsuyama A, Yashiroda Y, Usui T, Boone C, Yoshida M. Microarray-based target identification using drug hypersensitive fission yeast expressing ORFeome Molecular Biosystems. 7: 1463-1472. PMID 21340088 DOI: 10.1039/C0Mb00326C  1
2011 Bellay J, Han S, Michaut M, Kim T, Costanzo M, Andrews BJ, Boone C, Bader GD, Myers CL, Kim PM. Bringing order to protein disorder through comparative genomics and genetic interactions. Genome Biology. 12: R14. PMID 21324131 DOI: 10.1186/Gb-2011-12-2-R14  1
2011 Luo G, Costanzo M, Boone C, Dickson RC. Nutrients and the Pkh1/2 and Pkc1 protein kinases control mRNA decay and P-body assembly in yeast Journal of Biological Chemistry. 286: 8759-8770. PMID 21163942 DOI: 10.1074/Jbc.M110.196030  1
2011 Costanzo M, Baryshnikova A, Myers CL, Andrews B, Boone C. Charting the genetic interaction map of a cell. Current Opinion in Biotechnology. 22: 66-74. PMID 21111604 DOI: 10.1016/J.Copbio.2010.11.001  1
2011 Boone C. From chemical genomics to personalized medicine - Tackling the genotype to phenotype problem Molecular Biosystems. 7: 13. PMID 21107483 DOI: 10.1039/C0Mb90038A  1
2011 Ho CH, Piotrowski J, Dixon SJ, Baryshnikova A, Costanzo M, Boone C. Combining functional genomics and chemical biology to identify targets of bioactive compounds. Current Opinion in Chemical Biology. 15: 66-78. PMID 21093351 DOI: 10.1016/J.Cbpa.2010.10.023  1
2011 Finch AJ, Hilcenko C, Basse N, Drynan L, Goyenechea B, Menne TF, Fernández ÁG, Simpson P, D'Santos CS, Arends MJ, Donadieu J, Bellanné-Chantelot C, Costanzo M, Boone C, McKenzie AN, et al. 38 Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome Leukemia Research. 35. DOI: 10.1016/S0145-2126(11)70040-6  1
2010 Theis JF, Irene C, Dershowitz A, Brost RL, Tobin ML, Sanzo FMd, Wang J, Boone C, Newlon CS. The DNA Damage Response Pathway Contributes to the Stability of Chromosome III Derivatives Lacking Efficient Replicators Plos Genetics. 6. PMID 21151954 DOI: 10.1371/Journal.Pgen.1001227  1
2010 Greenland KB, Ding H, Costanzo M, Boone C, Davis TN. Identification of Saccharomyces cerevisiae spindle pole body remodeling factors Plos One. 5. PMID 21103054 DOI: 10.1371/Journal.Pone.0015426  1
2010 VanderSluis B, Bellay J, Musso G, Costanzo M, Papp B, Vizeacoumar FJ, Baryshnikova A, Andrews B, Boone C, Myers CL. Genetic interactions reveal the evolutionary trajectories of duplicate genes. Molecular Systems Biology. 6: 429. PMID 21081923 DOI: 10.1038/Msb.2010.82  1
2010 Baryshnikova A, Costanzo M, Kim Y, Ding H, Koh J, Toufighi K, Youn JY, Ou J, San Luis BJ, Bandyopadhyay S, Hibbs M, Hess D, Gingras AC, Bader GD, Troyanskaya OG, ... ... Boone C, et al. Quantitative analysis of fitness and genetic interactions in yeast on a genome scale. Nature Methods. 7: 1017-24. PMID 21076421 DOI: 10.1038/Nmeth.1534  1
2010 Michelot A, Costanzo M, Sarkeshik A, Boone C, Yates JR, Drubin DG. Reconstitution and protein composition analysis of endocytic actin patches. Current Biology : Cb. 20: 1890-9. PMID 21035341 DOI: 10.1016/J.Cub.2010.10.016  1
2010 Baryshnikova A, Costanzo M, Dixon S, Vizeacoumar FJ, Myers CL, Andrews B, Boone C. Synthetic genetic array (SGA) analysis in Saccharomyces cerevisiae and Schizosaccharomyces pombe. Methods in Enzymology. 470: 145-79. PMID 20946810 DOI: 10.1016/S0076-6879(10)70007-0  1
2010 Piotrowski JS, Ho CH, Boone C. The awesome power of synergy from chemical-chemical profiling. Chemistry & Biology. 17: 789-90. PMID 20797605 DOI: 10.1016/J.Chembiol.2010.08.002  1
2010 Miller AL, Dassori A, Lopez L, Castillo DA, Gonzalez JM, Boone C, Milam C, Bond GR, Velligan DI. Public-academic partnerships: tools for mental health agencies to evaluate research protocols. Psychiatric Services (Washington, D.C.). 61: 446-8. PMID 20439362 DOI: 10.1176/Appi.Ps.61.5.446  1
2010 Dowell RD, Ryan O, Jansen A, Cheung D, Agarwala S, Danford T, Bernstein DA, Rolfe PA, Heisler LE, Chin B, Nislow C, Giaever G, Phillips PC, Fink GR, Gifford DK, ... Boone C, et al. Genotype to phenotype: a complex problem. Science (New York, N.Y.). 328: 469. PMID 20413493 DOI: 10.1126/Science.1189015  1
2010 Costanzo M, Baryshnikova A, Bellay J, Kim Y, Spear ED, Sevier CS, Ding H, Koh JL, Toufighi K, Mostafavi S, Prinz J, St Onge RP, VanderSluis B, Makhnevych T, Vizeacoumar FJ, ... ... Boone C, et al. The genetic landscape of a cell. Science (New York, N.Y.). 327: 425-31. PMID 20093466 DOI: 10.1126/Science.1180823  1
2010 Vizeacoumar FJ, van Dyk N, S Vizeacoumar F, Cheung V, Li J, Sydorskyy Y, Case N, Li Z, Datti A, Nislow C, Raught B, Zhang Z, Frey B, Bloom K, Boone C, et al. Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis. The Journal of Cell Biology. 188: 69-81. PMID 20065090 DOI: 10.1083/Jcb.200909013  1
2010 Boone C, Minhas H, Smith M. Molecular BioSystems--celebrations, growth and development. Molecular Biosystems. 6: 13-5. PMID 20024061 DOI: 10.1039/B923136F  1
2010 Koh JL, Ding H, Costanzo M, Baryshnikova A, Toufighi K, Bader GD, Myers CL, Andrews BJ, Boone C. DRYGIN: a database of quantitative genetic interaction networks in yeast. Nucleic Acids Research. 38: D502-7. PMID 19880385 DOI: 10.1093/Nar/Gkp820  1
2010 Michaut M, Bellay J, Han S, Costanzo M, Andrews BJ, Boone C, Bader GD, Myers CL, Kim PM. Bringing order to disorder: Genomic analysis uncovers three distinct forms of protein disorder F1000research. 1. DOI: 10.7490/F1000Research.595.1  1
2010 Kim T, Bellay J, Han S, Michaut M, Constanzo M, Andrews BJ, Boone C, Bader GD, Myers CI, Kim PM. Revealing the role of conserved disordered regions in the human proteome using comparative proteomics F1000research. 1. DOI: 10.7490/F1000Research.275.1  1
2010 Michaut M, Baryshnikova A, Costanzo M, Myers CL, Andrews B, Boone C, Bader GD. Exploring the Monochromatic Landscape in Yeast using Genetic Interactions and Known Processes Reveals the Importance of Protein Complexes F1000research. 1. DOI: 10.7490/F1000Research.266.1  1
2009 Costanzo M, Baryshnikova A, Nislow C, Andrews B, Boone C. You too can play with an edge. Nature Methods. 6: 797-8. PMID 19876015 DOI: 10.1038/Nmeth1109-797  1
2009 Tonikian R, Xin X, Toret CP, Gfeller D, Landgraf C, Panni S, Paoluzi S, Castagnoli L, Currell B, Seshagiri S, Yu H, Winsor B, Vidal M, Gerstein MB, Bader GD, ... ... Boone C, et al. Bayesian modeling of the yeast SH3 domain interactome predicts spatiotemporal dynamics of endocytosis proteins. Plos Biology. 7: e1000218. PMID 19841731 DOI: 10.1371/Journal.Pbio.1000218  1
2009 Dixon SJ, Costanzo M, Baryshnikova A, Andrews B, Boone C. Systematic mapping of genetic interaction networks. Annual Review of Genetics. 43: 601-25. PMID 19712041 DOI: 10.1146/Annurev.Genet.39.073003.114751  1
2009 Dixon SJ, Andrews BJ, Boone C. Exploring the conservation of synthetic lethal genetic interaction networks. Communicative & Integrative Biology. 2: 78-81. PMID 19704894 DOI: 10.4161/Cib.7501  1
2009 Costanzo M, Boone C. SGAM: An array-based approach for high-resolution genetic mapping in saccharomyces cerevisiae Methods in Molecular Biology. 548: 37-53. PMID 19521818 DOI: 10.1007/978-1-59745-540-4_3  1
2009 Ball LG, Zhang K, Cobb JA, Boone C, Xiao W. The yeast Shu complex couples error-free post-replication repair to homologous recombination. Molecular Microbiology. 73: 89-102. PMID 19496932 DOI: 10.1111/J.1365-2958.2009.06748.X  1
2009 Xin X, Rual JF, Hirozane-Kishikawa T, Hill DE, Vidal M, Boone C, Thierry-Mieg N. Shifted Transversal Design smart-pooling for high coverage interactome mapping. Genome Research. 19: 1262-9. PMID 19447967 DOI: 10.1101/Gr.090019.108  1
2009 Vizeacoumar FJ, Chong Y, Boone C, Andrews BJ. A picture is worth a thousand words: genomics to phenomics in the yeast Saccharomyces cerevisiae. Febs Letters. 583: 1656-61. PMID 19351535 DOI: 10.1016/J.Febslet.2009.03.068  1
2009 Ho CH, Magtanong L, Barker SL, Gresham D, Nishimura S, Natarajan P, Koh JL, Porter J, Gray CA, Andersen RJ, Giaever G, Nislow C, Andrews B, Botstein D, Graham TR, ... ... Boone C, et al. A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds. Nature Biotechnology. 27: 369-77. PMID 19349972 DOI: 10.1038/Nbt.1534  1
2009 Makhnevych T, Sydorskyy Y, Xin X, Srikumar T, Vizeacoumar FJ, Jeram SM, Li Z, Bahr S, Andrews BJ, Boone C, Raught B. Global map of SUMO function revealed by protein-protein interaction and genetic networks. Molecular Cell. 33: 124-35. PMID 19150434 DOI: 10.1016/J.Molcel.2008.12.025  1
2009 Leidel S, Pedrioli PG, Bucher T, Brost R, Costanzo M, Schmidt A, Aebersold R, Boone C, Hofmann K, Peter M. Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA. Nature. 458: 228-32. PMID 19145231 DOI: 10.1038/Nature07643  1
2009 Venkatesan K, Rual JF, Vazquez A, Stelzl U, Lemmens I, Hirozane-Kishikawa T, Hao T, Zenkner M, Xin X, Goh KI, Yildirim MA, Simonis N, Heinzmann K, Gebreab F, Sahalie JM, ... ... Boone C, et al. An empirical framework for binary interactome mapping. Nature Methods. 6: 83-90. PMID 19060904 DOI: 10.1038/Nmeth.1280  1
2009 Ozanick SG, Wang X, Costanzo M, Brost RL, Boone C, Anderson JT. Rex1p deficiency leads to accumulation of precursor initiator tRNAMet and polyadenylation of substrate RNAs in Saccharomyces cerevisiae. Nucleic Acids Research. 37: 298-308. PMID 19042972 DOI: 10.1093/Nar/Gkn925  1
2008 Yu L, Lopez A, Anaflous A, El Bali B, Hamal A, Ericson E, Heisler LE, McQuibban A, Giaever G, Nislow C, Boone C, Brown GW, Bellaoui M. Chemical-genetic profiling of imidazo[1,2-a]pyridines and -pyrimidines reveals target pathways conserved between yeast and human cells. Plos Genetics. 4: e1000284. PMID 19043571 DOI: 10.1371/Journal.Pgen.1000284  1
2008 Dixon SJ, Fedyshyn Y, Koh JL, Prasad TS, Chahwan C, Chua G, Toufighi K, Baryshnikova A, Hayles J, Hoe KL, Kim DU, Park HO, Myers CL, Pandey A, Durocher D, ... ... Boone C, et al. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Proceedings of the National Academy of Sciences of the United States of America. 105: 16653-8. PMID 18931302 DOI: 10.1073/Pnas.0806261105  1
2008 Tonikian R, Zhang Y, Sazinsky SL, Currell B, Yeh JH, Reva B, Held HA, Appleton BA, Evangelista M, Wu Y, Xin X, Chan AC, Seshagiri S, Lasky LA, Sander C, ... Boone C, et al. A specificity map for the PDZ domain family. Plos Biology. 6: e239. PMID 18828675 DOI: 10.1371/Journal.Pbio.0060239  1
2008 Hausmann S, Zheng S, Costanzo M, Brost RL, Garcin D, Boone C, Shuman S, Schwer B. Genetic and biochemical analysis of yeast and human cap trimethylguanosine synthase: functional overlap of 2,2,7-trimethylguanosine caps, small nuclear ribonucleoprotein components, pre-mRNA splicing factors, and RNA decay pathways. The Journal of Biological Chemistry. 283: 31706-18. PMID 18775984 DOI: 10.1074/Jbc.M806127200  1
2008 Mousley CJ, Tyeryar K, Ile KE, Schaaf G, Brost RL, Boone C, Guan X, Wenk MR, Bankaitis VA. Trans-Golgi network and endosome dynamics connect ceramide homeostasis with regulation of the unfolded protein response and TOR signaling in yeast. Molecular Biology of the Cell. 19: 4785-803. PMID 18753406 DOI: 10.1091/Mbc.E08-04-0426  1
2008 Yu H, Braun P, Yildirim MA, Lemmens I, Venkatesan K, Sahalie J, Hirozane-Kishikawa T, Gebreab F, Li N, Simonis N, Hao T, Rual JF, Dricot A, Vazquez A, Murray RR, ... ... Boone C, et al. High-quality binary protein interaction map of the yeast interactome network. Science (New York, N.Y.). 322: 104-10. PMID 18719252 DOI: 10.1126/Science.1158684  1
2008 Butland G, Babu M, Díaz-Mejía JJ, Bohdana F, Phanse S, Gold B, Yang W, Li J, Gagarinova AG, Pogoutse O, Mori H, Wanner BL, Lo H, Wasniewski J, Christopolous C, ... ... Boone C, et al. eSGA: E. coli synthetic genetic array analysis. Nature Methods. 5: 789-95. PMID 18677321 DOI: 10.1038/Nmeth.1239  1
2008 Federovitch CM, Jones YZ, Tong AH, Boone C, Prinz WA, Hampton RY. Genetic and structural analysis of Hmg2p-induced endoplasmic reticulum remodeling in Saccharomyces cerevisiae. Molecular Biology of the Cell. 19: 4506-20. PMID 18667535 DOI: 10.1091/Mbc.E07-11-1188  1
2008 Yan Z, Costanzo M, Heisler LE, Paw J, Kaper F, Andrews BJ, Boone C, Giaever G, Nislow C. Yeast Barcoders: a chemogenomic application of a universal donor-strain collection carrying bar-code identifiers. Nature Methods. 5: 719-25. PMID 18622398 DOI: 10.1038/Nmeth.1231  1
2008 Willis IM, Chua G, Tong AH, Brost RL, Hughes TR, Boone C, Moir RD. Genetic interactions of MAF1 identify a role for Med20 in transcriptional repression of ribosomal protein genes. Plos Genetics. 4: e1000112. PMID 18604275 DOI: 10.1371/Journal.Pgen.1000112  1
2008 Dekker C, Stirling PC, McCormack EA, Filmore H, Paul A, Brost RL, Costanzo M, Boone C, Leroux MR, Willison KR. The interaction network of the chaperonin CCT Embo Journal. 27: 1827-1839. PMID 18511909 DOI: 10.1038/Emboj.2008.108  1
2008 Musso G, Costanzo M, Huangfu M, Smith AM, Paw J, San Luis BJ, Boone C, Giaever G, Nislow C, Emili A, Zhang Z. The extensive and condition-dependent nature of epistasis among whole-genome duplicates in yeast. Genome Research. 18: 1092-9. PMID 18463300 DOI: 10.1101/Gr.076174.108  1
2008 Lopez A, Parsons AB, Nislow C, Giaever G, Boone C. Chemical-genetic approaches for exploring the mode of action of natural products. Progress in Drug Research. Fortschritte Der Arzneimittelforschung. ProgrèS Des Recherches Pharmaceutiques. 66: 237, 239-71. PMID 18416308 DOI: 10.1007/978-3-7643-8595-8_5  1
2008 Wang W, Bouhours M, Gracheva EO, Liao EH, Xu K, Sengar AS, Xin X, Roder J, Boone C, Richmond JE, Zhen M, Egan SE. ITSN-1 controls vesicle recycling at the neuromuscular junction and functions in parallel with DAB-1. Traffic (Copenhagen, Denmark). 9: 742-54. PMID 18298590 DOI: 10.1111/J.1600-0854.2008.00712.X  1
2008 Ohkuni K, Abdulle R, Tong AHY, Boone C, Kitagawa K. Ybp2 Associates with the Central Kinetochore of Saccharomyces cerevisiae and Mediates Proper Mitotic Progression Plos One. 3. PMID 18286174 DOI: 10.1371/Journal.Pone.0001617  1
2008 Zhao R, Kakihara Y, Gribun A, Huen J, Yang G, Khanna M, Costanzo M, Brost RL, Boone C, Hughes TR, Yip CM, Houry WA. Molecular chaperone Hsp90 stabilizes Pih1/Nop17 to maintain R2TP complex activity that regulates snoRNA accumulation. The Journal of Cell Biology. 180: 563-78. PMID 18268103 DOI: 10.1083/Jcb.200709061  1
2008 Amaro IA, Costanzo M, Boone C, Huffaker TC. The Saccharomyces cerevisiae homolog of p24 is essential for maintaining the association of p150Glued with the dynactin complex. Genetics. 178: 703-9. PMID 18245366 DOI: 10.1534/Genetics.107.079103  1
2008 Mousley CJ, Tyeryar K, Ile KE, Schaaf G, Brost R, Boone C, Guan X, Wenk MR, Bankaitis VA. Ceramide mediated silencing of the unfolded protein response in Saccharomyces cerevisiae Chemistry and Physics of Lipids. 154: S3. DOI: 10.1016/J.Chemphyslip.2008.05.010  0.01
2007 Alto NM, Weflen AW, Rardin MJ, Yarar D, Lazar CS, Tonikian R, Koller A, Taylor SS, Boone C, Sidhu SS, Schmid SL, Hecht GA, Dixon JE. The type III effector EspF coordinates membrane trafficking by the spatiotemporal activation of two eukaryotic signaling pathways. The Journal of Cell Biology. 178: 1265-78. PMID 17893247 DOI: 10.1083/Jcb.200705021  1
2007 Jain S, Stanford N, Bhagwat N, Seiler B, Costanzo M, Boone C, Oelkers P. Identification of a novel lysophospholipid acyltransferase in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 282: 30562-9. PMID 17726007 DOI: 10.1074/Jbc.M706326200  1
2007 Hanna M, Ball LG, Tong AH, Boone C, Xiao W. Pol32 is required for Pol zeta-dependent translesion synthesis and prevents double-strand breaks at the replication fork. Mutation Research. 625: 164-76. PMID 17681555 DOI: 10.1016/J.Mrfmmm.2007.06.008  1
2007 Tonikian R, Zhang Y, Boone C, Sidhu SS. Identifying specificity profiles for peptide recognition modules from phage-displayed peptide libraries. Nature Protocols. 2: 1368-86. PMID 17545975 DOI: 10.1038/Nprot.2007.151  1
2007 Boone C, Bussey H, Andrews BJ. Exploring genetic interactions and networks with yeast. Nature Reviews. Genetics. 8: 437-49. PMID 17510664 DOI: 10.1038/Nrg2085  1
2007 Xu H, Boone C, Brown GW. Genetic dissection of parallel sister-chromatid cohesion pathways. Genetics. 176: 1417-29. PMID 17483413 DOI: 10.1534/Genetics.107.072876  1
2007 Gao XD, Sperber LM, Kane SA, Tong Z, Tong AH, Boone C, Bi E. Sequential and distinct roles of the cadherin domain-containing protein Axl2p in cell polarization in yeast cell cycle. Molecular Biology of the Cell. 18: 2542-60. PMID 17460121 DOI: 10.1091/Mbc.E06-09-0822  1
2007 Hurto RL, Tong AH, Boone C, Hopper AK. Inorganic phosphate deprivation causes tRNA nuclear accumulation via retrograde transport in Saccharomyces cerevisiae. Genetics. 176: 841-52. PMID 17409072 DOI: 10.1534/Genetics.106.069732  1
2007 Menne TF, Goyenechea B, Sánchez-Puig N, Wong CC, Tonkin LM, Ancliff PJ, Brost RL, Costanzo M, Boone C, Warren AJ. The Shwachman-Bodian-Diamond syndrome protein mediates translational activation of ribosomes in yeast. Nature Genetics. 39: 486-495. PMID 17353896 DOI: 10.1038/Ng1994  1
2007 Collins SR, Miller KM, Maas NL, Roguev A, Fillingham J, Chu CS, Schuldiner M, Gebbia M, Recht J, Shales M, Ding H, Xu H, Han J, Ingvarsdottir K, Cheng B, ... ... Boone C, et al. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature. 446: 806-10. PMID 17314980 DOI: 10.1038/Nature05649  1
2007 Tong AHY, Boone C. 16 High-Throughput Strain Construction and Systematic Synthetic Lethal Screening in S a c c h a r o m y c e s c e r e v i s i a e Methods in Microbiology. 36. DOI: 10.1016/S0580-9517(06)36016-3  1
2006 Mazurkiewicz P, Tang CM, Boone C, Holden DW. Signature-tagged mutagenesis: barcoding mutants for genome-wide screens. Nature Reviews. Genetics. 7: 929-39. PMID 17139324 DOI: 10.1038/Nrg1984  0.01
2006 Welsh LM, Tong AH, Boone C, Jensen ON, Otte S. Genetic and molecular interactions of the Erv41p-Erv46p complex involved in transport between the endoplasmic reticulum and Golgi complex Journal of Cell Science. 119: 4730-4740. PMID 17077122 DOI: 10.1242/Jcs.03250  1
2006 Parsons AB, Lopez A, Givoni IE, Williams DE, Gray CA, Porter J, Chua G, Sopko R, Brost RL, Ho CH, Wang J, Ketela T, Brenner C, Brill JA, Fernandez GE, ... ... Boone C, et al. Exploring the mode-of-action of bioactive compounds by chemical-genetic profiling in yeast. Cell. 126: 611-25. PMID 16901791 DOI: 10.1016/J.Cell.2006.06.040  1
2006 Chua G, Morris QD, Sopko R, Robinson MD, Ryan O, Chan ET, Frey BJ, Andrews BJ, Boone C, Hughes TR. Identifying transcription factor functions and targets by phenotypic activation. Proceedings of the National Academy of Sciences of the United States of America. 103: 12045-50. PMID 16880382 DOI: 10.1073/Pnas.0605140103  1
2006 Bussey H, Andrews B, Boone C. From worm genetic networks to complex human diseases. Nature Genetics. 38: 862-3. PMID 16874324 DOI: 10.1038/Ng0806-862  1
2006 Tabuchi M, Audhya A, Parsons AB, Boone C, Emr SD. The phosphatidylinositol 4,5-biphosphate and TORC2 binding proteins Slm1 and Slm2 function in sphingolipid regulation. Molecular and Cellular Biology. 26: 5861-75. PMID 16847337 DOI: 10.1128/Mcb.02403-05  1
2006 Chang M, Parsons AB, Sheikh BH, Boone C, Brown GW. Genomic approaches for identifying DNA damage response pathways in S. cerevisiae. Methods in Enzymology. 409: 213-35. PMID 16793404 DOI: 10.1016/S0076-6879(05)09013-0  1
2006 Reguly T, Breitkreutz A, Boucher L, Breitkreutz BJ, Hon GC, Myers CL, Parsons A, Friesen H, Oughtred R, Tong A, Stark C, Ho Y, Botstein D, Andrews B, Boone C, et al. Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae. Journal of Biology. 5: 11. PMID 16762047 DOI: 10.1186/Jbiol36  1
2006 Sopko R, Huang D, Preston N, Chua G, Papp B, Kafadar K, Snyder M, Oliver SG, Cyert M, Hughes TR, Boone C, Andrews B. Mapping pathways and phenotypes by systematic gene overexpression. Molecular Cell. 21: 319-30. PMID 16455487 DOI: 10.1016/J.Molcel.2005.12.011  1
2006 Alto NM, Shao F, Lazar CS, Brost RL, Chua G, Mattoo S, McMahon SA, Ghosh P, Hughes TR, Boone C, Dixon JE. Identification of a bacterial type III effector family with G protein mimicry functions. Cell. 124: 133-45. PMID 16413487 DOI: 10.1016/J.Cell.2005.10.031  1
2006 Tong AHY, Boone C. Synthetic genetic array analysis in Saccharomyces cerevisiae Methods in Molecular Biology (Clifton, N.J.). 313: 171-192. PMID 16118434 DOI: 10.1385/1-59259-958-3:171  1
2005 Budd ME, Tong AH, Polaczek P, Peng X, Boone C, Campbell JL. A network of multi-tasking proteins at the DNA replication fork preserves genome stability. Plos Genetics. 1: e61. PMID 16327883 DOI: 10.1371/Journal.Pgen.0010061  1
2005 Keogh MC, Kurdistani SK, Morris SA, Ahn SH, Podolny V, Collins SR, Schuldiner M, Chin K, Punna T, Thompson NJ, Boone C, Emili A, Weissman JS, Hughes TR, Strahl BD, et al. Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex. Cell. 123: 593-605. PMID 16286008 DOI: 10.1016/J.Cell.2005.10.025  1
2005 Schuldiner M, Collins SR, Thompson NJ, Denic V, Bhamidipati A, Punna T, Ihmels J, Andrews B, Boone C, Greenblatt JF, Weissman JS, Krogan NJ. Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Cell. 123: 507-19. PMID 16269340 DOI: 10.1016/J.Cell.2005.08.031  1
2005 Measday V, Baetz K, Guzzo J, Yuen K, Kwok T, Sheikh B, Ding H, Ueta R, Hoac T, Cheng B, Pot I, Tong A, Yamaguchi-Iwai Y, Boone C, Hieter P, et al. Systematic yeast synthetic lethal and synthetic dosage lethal screens identify genes required for chromosome segregation. Proceedings of the National Academy of Sciences of the United States of America. 102: 13956-61. PMID 16172405 DOI: 10.1073/Pnas.0503504102  1
2005 Davierwala AP, Haynes J, Li Z, Brost RL, Robinson MD, Yu L, Mnaimneh S, Ding H, Zhu H, Chen Y, Cheng X, Brown GW, Boone C, Andrews BJ, Hughes TR. The synthetic genetic interaction spectrum of essential genes. Nature Genetics. 37: 1147-52. PMID 16155567 DOI: 10.1038/Ng1640  1
2005 Zhang LV, King OD, Wong SL, Goldberg DS, Tong AH, Lesage G, Andrews B, Bussey H, Boone C, Roth FP. Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network. Journal of Biology. 4: 6. PMID 15982408 DOI: 10.1186/Jbiol23  1
2005 Tyers M, Brown E, Andrews DW, Bergeron JJ, Boone C, Bremner R, Bussey HA, Cross JC, Davies JE, Desjardins M, Dick JE, Dumont DJ, Durocher D, Ellison MJ, Golding GB, et al. Problems with co-funding in Canada. Science (New York, N.Y.). 308: 1867. PMID 15976286 DOI: 10.1126/Science.308.5730.1867B  1
2005 Chang M, Bellaoui M, Zhang C, Desai R, Morozov P, Delgado-Cruzata L, Rothstein R, Freyer GA, Boone C, Brown GW. RMI1/NCE4, a suppressor of genome instability, encodes a member of the RecQ helicase/Topo III complex. The Embo Journal. 24: 2024-33. PMID 15889139 DOI: 10.1038/Sj.Emboj.7600684  1
2005 Zhao R, Davey M, Hsu YC, Kaplanek P, Tong A, Parsons AB, Krogan N, Cagney G, Mai D, Greenblatt J, Boone C, Emili A, Houry WA. Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone. Cell. 120: 715-27. PMID 15766533 DOI: 10.1016/J.Cell.2004.12.024  1
2005 Lesage G, Shapiro J, Specht CA, Sdicu AM, Ménard P, Hussein S, Tong AH, Boone C, Bussey H. An interactional network of genes involved in chitin synthesis in Saccharomyces cerevisiae. Bmc Genetics. 6: 8. PMID 15715908 DOI: 10.1186/1471-2156-6-8  1
2005 Sciorra VA, Audhya A, Parsons AB, Segev N, Boone C, Emr SD. Synthetic genetic array analysis of the PtdIns 4-kinase Pik1p identifies components in a Golgi-specific Ypt31/rab-GTPase signaling pathway. Molecular Biology of the Cell. 16: 776-93. PMID 15574876 DOI: 10.1091/Mbc.E04-08-0700  1
2004 Gillingham AK, Tong AH, Boone C, Munro S. The GTPase Arf1p and the ER to Golgi cargo receptor Erv14p cooperate to recruit the golgin Rud3p to the cis-Golgi. The Journal of Cell Biology. 167: 281-92. PMID 15504911 DOI: 10.1083/Jcb.200407088  1
2004 Wong SL, Zhang LV, Tong AH, Li Z, Goldberg DS, King OD, Lesage G, Vidal M, Andrews B, Bussey H, Boone C, Roth FP. Combining biological networks to predict genetic interactions. Proceedings of the National Academy of Sciences of the United States of America. 101: 15682-7. PMID 15496468 DOI: 10.1073/Pnas.0406614101  1
2004 Glaser P, Boone C. Beyond the genome: from genomics to systems biology. Current Opinion in Microbiology. 7: 489-91. PMID 15451503 DOI: 10.1016/J.Mib.2004.08.016  1
2004 Audhya A, Loewith R, Parsons AB, Gao L, Tabuchi M, Zhou H, Boone C, Hall MN, Emr SD. Genome-wide lethality screen identifies new PI4,5P2 effectors that regulate the actin cytoskeleton. The Embo Journal. 23: 3747-57. PMID 15372071 DOI: 10.1038/Sj.Emboj.7600384  1
2004 Xu H, Boone C, Klein HL. Mrc1 is required for sister chromatid cohesion to aid in recombination repair of spontaneous damage Molecular and Cellular Biology. 24: 7082-7090. PMID 15282308 DOI: 10.1128/Mcb.24.16.7082-7090.2004  1
2004 Mnaimneh S, Davierwala AP, Haynes J, Moffat J, Peng WT, Zhang W, Yang X, Pootoolal J, Chua G, Lopez A, Trochesset M, Morse D, Krogan NJ, Hiley SL, Li Z, ... ... Boone C, et al. Exploration of essential gene functions via titratable promoter alleles. Cell. 118: 31-44. PMID 15242642 DOI: 10.1016/J.Cell.2004.06.013  1
2004 Suter B, Tong A, Chang M, Yu L, Brown GW, Boone C, Rine J. The origin recognition complex links replication, sister chromatid cohesion and transcriptional silencing in Saccharomyces cerevisiae. Genetics. 167: 579-91. PMID 15238513 DOI: 10.1534/Genetics.103.024851  1
2004 Setty SR, Strochlic TI, Tong AH, Boone C, Burd CG. Golgi targeting of ARF-like GTPase Arl3p requires its Nalpha-acetylation and the integral membrane protein Sys1p. Nature Cell Biology. 6: 414-9. PMID 15077114 DOI: 10.1038/Ncb1121  1
2004 Nelson B, Parsons AB, Evangelista M, Schaefer K, Kennedy K, Ritchie S, Petryshen TL, Boone C. Fus1p Interacts With Components of the Hog1p Mitogen-Activated Protein Kinase and Cdc42p Morphogenesis Signaling Pathways to Control Cell Fusion During Yeast Mating Genetics. 166: 67-77. PMID 15020407 DOI: 10.1534/Genetics.166.1.67  1
2004 Tong AH, Lesage G, Bader GD, Ding H, Xu H, Xin X, Young J, Berriz GF, Brost RL, Chang M, Chen Y, Cheng X, Chua G, Friesen H, Goldberg DS, ... ... Boone C, et al. Global mapping of the yeast genetic interaction network. Science (New York, N.Y.). 303: 808-13. PMID 14764870 DOI: 10.1126/Science.1091317  1
2004 Mayer ML, Pot I, Chang M, Xu H, Aneliunas V, Kwok T, Newitt R, Aebersold R, Boone C, Brown GW, Hieter P. Identification of protein complexes required for efficient sister chromatid cohesion. Molecular Biology of the Cell. 15: 1736-45. PMID 14742714 DOI: 10.1091/Mbc.E03-08-0619  1
2004 Hughes T, Andrews B, Boone C. Old Drugs, New Tricks: Using Genetically Sensitized Yeast to Reveal Drug Targets Cell. 116: 5-7. PMID 14718160 DOI: 10.1016/S0092-8674(03)01070-5  1
2004 Parsons AB, Brost RL, Ding H, Li Z, Zhang C, Sheikh B, Brown GW, Kane PM, Hughes TR, Boone C. Integration of chemical-genetic and genetic interaction data links bioactive compounds to cellular target pathways. Nature Biotechnology. 22: 62-9. PMID 14661025 DOI: 10.1038/Nbt919  1
2003 Andrews BJ, Bader GD, Boone C. Playing tag with the yeast proteome. Nature Biotechnology. 21: 1297-9. PMID 14595360 DOI: 10.1038/Nbt1103-1297  1
2003 Zigmond SH, Evangelista M, Boone C, Yang C, Dar AC, Sicheri F, Forkey J, Pring M. Formin leaky cap allows elongation in the presence of tight capping proteins. Current Biology : Cb. 13: 1820-3. PMID 14561409 DOI: 10.1016/J.Cub.2003.09.057  1
2003 Roemer T, Jiang B, Davison J, Ketela T, Veillette K, Breton A, Tandia F, Linteau A, Sillaots S, Marta C, Martel N, Veronneau S, Lemieux S, Kauffman S, Becker J, ... ... Boone C, et al. Large-scale essential gene identification in Candida albicans and applications to antifungal drug discovery. Molecular Microbiology. 50: 167-81. PMID 14507372 DOI: 10.1046/J.1365-2958.2003.03697.X  1
2003 Nelson B, Kurischko C, Horecka J, Mody M, Nair P, Pratt L, Zougman A, McBroom LD, Hughes TR, Boone C, Luca FC. RAM: a conserved signaling network that regulates Ace2p transcriptional activity and polarized morphogenesis. Molecular Biology of the Cell. 14: 3782-803. PMID 12972564 DOI: 10.1091/Mbc.E03-01-0018  1
2003 Kozminski KG, Beven L, Angerman E, Tong AH, Boone C, Park HO. Interaction between a Ras and a Rho GTPase couples selection of a growth site to the development of cell polarity in yeast. Molecular Biology of the Cell. 14: 4958-70. PMID 12960420 DOI: 10.1091/Mbc.E03-06-0426  1
2003 Bellaoui M, Chang M, Ou J, Xu H, Boone C, Brown GW. Elg1 forms an alternative RFC complex important for DNA replication and genome integrity. The Embo Journal. 22: 4304-13. PMID 12912927 DOI: 10.1093/Emboj/Cdg406  1
2003 Bader GD, Heilbut A, Andrews B, Tyers M, Hughes T, Boone C. Functional genomics and proteomics: charting a multidimensional map of the yeast cell. Trends in Cell Biology. 13: 344-56. PMID 12837605 DOI: 10.1016/S0962-8924(03)00127-2  0.01
2003 Evangelista M, Zigmond S, Boone C. Formins: Signaling effectors for assembly and polarization of actin filaments Journal of Cell Science. 116: 2603-2611. PMID 12775772 DOI: 10.1242/Jcs.00611  1
2003 Krogan NJ, Kim M, Tong A, Golshani A, Cagney G, Canadien V, Richards DP, Beattie BK, Emili A, Boone C, Shilatifard A, Buratowski S, Greenblatt J. Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II. Molecular and Cellular Biology. 23: 4207-18. PMID 12773564 DOI: 10.1128/Mcb.23.12.4207-4218.2003  1
2003 Boone C, Andrews B. ORFeomics: Correcting the wiggle in worm genes Nature Genetics. 34: 8-9. PMID 12721544 DOI: 10.1038/Ng0503-8  1
2003 Goehring AS, Mitchell DA, Tong AH, Keniry ME, Boone C, Sprague GF. Synthetic lethal analysis implicates Ste20p, a p21-activated potein kinase, in polarisome activation. Molecular Biology of the Cell. 14: 1501-16. PMID 12686605 DOI: 10.1091/Mbc.E02-06-0348  1
2003 Sidhu SS, Bader GD, Boone C. Functional genomics of intracellular peptide recognition domains with combinatorial biology methods. Current Opinion in Chemical Biology. 7: 97-102. PMID 12547433 DOI: 10.1016/S1367-5931(02)00011-X  0.01
2003 Hwang WW, Venkatasubrahmanyam S, Ianculescu AG, Tong A, Boone C, Madhani HD. A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Molecular Cell. 11: 261-6. PMID 12535538 DOI: 10.1016/S1097-2765(02)00826-2  1
2003 Pring M, Evangelista M, Boone C, Yang C, Zigmond SH. Mechanism of formin-induced nucleation of actin filaments. Biochemistry. 42: 486-96. PMID 12525176 DOI: 10.1021/Bi026520J  1
2002 Fields S, Drees B, Hazbun TR, Tucker C, Tong AHY, Evangelista M, Boone C, Nardelli G, Castagnoli L, Zucconi A, Cesareni G, Bader G, Hogue C. Approaches to Analyze Protein Interactions. Thescientificworldjournal. 2: 93-94. PMID 29973818 DOI: 10.1100/Tsw.2002.44  1
2002 Chang M, Bellaoui M, Boone C, Brown GW. A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage. Proceedings of the National Academy of Sciences of the United States of America. 99: 16934-9. PMID 12482937 DOI: 10.1073/Pnas.262669299  1
2002 Pruyne D, Evangelista M, Yang C, Bi E, Zigmond S, Bretscher A, Boone C. Role of formins in actin assembly: Nucleation and barbed-end association Science. 297: 612-615. PMID 12052901 DOI: 10.1126/Science.1072309  1
2002 Tong AH, Drees B, Nardelli G, Bader GD, Brannetti B, Castagnoli L, Evangelista M, Ferracuti S, Nelson B, Paoluzi S, Quondam M, Zucconi A, Hogue CW, Fields S, Boone C, et al. A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules. Science (New York, N.Y.). 295: 321-4. PMID 11743162 DOI: 10.1126/Science.1064987  1
2002 Evangelista M, Pruyne D, Amberg DC, Boone C, Bretscher A. Formins direct Arp2/3-independent actin filament assembly to polarize cell growth in yeast. Nature Cell Biology. 4: 32-41. PMID 11740490 DOI: 10.1038/Ncb718  1
2001 Tong AH, Evangelista M, Parsons AB, Xu H, Bader GD, Pagé N, Robinson M, Raghibizadeh S, Hogue CW, Bussey H, Andrews B, Tyers M, Boone C. Systematic genetic analysis with ordered arrays of yeast deletion mutants. Science (New York, N.Y.). 294: 2364-8. PMID 11743205 DOI: 10.1126/Science.1065810  1
2001 Drees BL, Sundin B, Brazeau E, Caviston JP, Chen GC, Guo W, Kozminski KG, Lau MW, Moskow JJ, Tong A, Schenkman LR, McKenzie A, Brennwald P, Longtine M, Bi E, ... ... Boone C, et al. A protein interaction map for cell polarity development. The Journal of Cell Biology. 154: 549-71. PMID 11489916 DOI: 10.1083/Jcb.200104057  1
2001 Harris K, Lamson RE, Nelson B, Hughes TR, Marton MJ, Roberts CJ, Boone C, Pryciak PM. Role of scaffolds in MAP kinase pathway specificity revealed by custom design of pathway-dedicated signaling proteins. Current Biology. 11: 1815-1824. DOI: 10.1016/S0960-9822(01)00567-X  1
2000 Roth AF, Nelson B, Boone C, Davis NG. Asg7p-Ste3p inhibition of pheromone signaling: Regulation of the zygotic transition to vegetative growth Molecular and Cellular Biology. 20: 8815-8825. PMID 11073982 DOI: 10.1128/Mcb.20.23.8815-8825.2000  1
2000 Roberts CJ, Nelson B, Marton MJ, Stoughton R, Meyer MR, Bennett HA, He YD, Dai H, Walker WL, Hughes TR, Tyers M, Boone C, Friend SH. Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles Science. 287: 873-880. PMID 10657304 DOI: 10.1126/Science.287.5454.873  1
1998 Anderson BL, Boldogh I, Evangelista M, Boone C, Greene LA, Pon LA. The Src homology domain 3 (SH3) of a yeast type I myosin, Myo5p, binds to verprolin and is required for targeting to sites of actin polarization. The Journal of Cell Biology. 141: 1357-70. PMID 9628892 DOI: 10.1083/Jcb.141.6.1357  1
1997 Evangelista M, Blundell K, Longtine MS, Chow CJ, Adames N, Pringle JR, Peter M, Boone C. Bni1p, a yeast formin linking Cdc42p and the actin cytoskeleton during polarized morphogenesis Science. 276: 118-122. PMID 9082982 DOI: 10.1126/Science.276.5309.118  1
1992 Boone C, Clark KL, Sprague GF. Identification of a tRNAGln ochre suppressor in Saccharomyces cerevisiae Nucleic Acids Research. 20: 4661. PMID 1408770 DOI: 10.1093/Nar/20.17.4661  1
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