| Year |
Citation |
Score |
| 2023 |
Yang EJY, Nemhauser JL. Building a pipeline to identify and engineer constitutive and repressible promoters. Quantitative Plant Biology. 4: e12. PMID 37901686 DOI: 10.1017/qpb.2023.10 |
0.314 |
|
| 2023 |
Yang EJY, Maranas CJ, Nemhauser JL. A comparative analysis of stably expressed genes across diverse angiosperms exposes flexibility in underlying promoter architecture. G3 (Bethesda, Md.). PMID 37697043 DOI: 10.1093/g3journal/jkad206 |
0.802 |
|
| 2023 |
Yang EJY, Maranas CJ, Nemhauser JL. A comparative analysis of stably expressed genes across diverse angiosperms exposes flexibility in underlying promoter architecture. Biorxiv : the Preprint Server For Biology. PMID 37398445 DOI: 10.1101/2023.06.12.544596 |
0.801 |
|
| 2023 |
Guiziou S, Maranas CJ, Chu JC, Nemhauser JL. An integrase toolbox to record gene-expression during plant development. Nature Communications. 14: 1844. PMID 37012288 DOI: 10.1038/s41467-023-37607-5 |
0.799 |
|
| 2022 |
Leydon AR, Ramos Báez R, Nemhauser JL. A single helix repression domain is functional across diverse eukaryotes. Proceedings of the National Academy of Sciences of the United States of America. 119: e2206986119. PMID 36191192 DOI: 10.1073/pnas.2206986119 |
0.767 |
|
| 2022 |
Guiziou S, Chu JC, Nemhauser JL. Decoding and recoding plant development. Plant Physiology. 187: 515-526. PMID 35237818 DOI: 10.1093/plphys/kiab336 |
0.817 |
|
| 2021 |
Wright RC, Moss BL, Nemhauser JL. The Systems and Synthetic Biology of Auxin. Cold Spring Harbor Perspectives in Biology. PMID 34127446 DOI: 10.1101/cshperspect.a040071 |
0.716 |
|
| 2021 |
Leydon AR, Wang W, Gala HP, Gilmour S, Juarez-Solis S, Zahler ML, Zemke JE, Zheng N, Nemhauser JL. Repression by the TOPLESS corepressor requires association with the core Mediator complex. Elife. 10. PMID 34075876 DOI: 10.7554/eLife.66739 |
0.815 |
|
| 2021 |
Gala HP, Lanctot A, Jean-Baptiste K, Guiziou S, Chu JC, Zemke JE, George W, Queitsch C, Cuperus JT, Nemhauser JL. A single cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana. The Plant Cell. PMID 33822225 DOI: 10.1093/plcell/koab101 |
0.797 |
|
| 2021 |
Ramos Báez R, Nemhauser JL. Expansion and innovation in auxin signaling: where do we grow from here? Development (Cambridge, England). 148. PMID 33712444 DOI: 10.1242/dev.187120 |
0.397 |
|
| 2020 |
Lanctot A, Nemhauser JL. It's Morphin' time: how multiple signals converge on ARF transcription factors to direct development. Current Opinion in Plant Biology. 57: 1-7. PMID 32480312 DOI: 10.1016/j.pbi.2020.04.008 |
0.809 |
|
| 2020 |
Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu LD, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite JM, Rigal A, R Harborough SR, ... ... Nemhauser J, et al. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. Molecular & Cellular Proteomics : McP. PMID 32404488 DOI: 10.1074/Mcp.Ra119.001826 |
0.393 |
|
| 2020 |
Ramos Báez R, Buckley Y, Yu H, Chen Z, Gallavotti A, Nemhauser J, Moss BL. A synthetic approach allows rapid characterization of the maize nuclear auxin response circuit. Plant Physiology. PMID 32123041 DOI: 10.1104/Pp.19.01475 |
0.746 |
|
| 2020 |
Leydon AR, Gala HP, Guiziou S, Nemhauser JL. Engineering Synthetic Signaling in Plants. Annual Review of Plant Biology. PMID 32092279 DOI: 10.1146/annurev-arplant-081519-035852 |
0.784 |
|
| 2020 |
Lanctot A, Taylor-Teeples M, Oki EA, Nemhauser J. Specificity in auxin responses is not explained by the promoter preferences of activator ARFs. Plant Physiology. PMID 31937684 DOI: 10.1104/pp.19.01474 |
0.774 |
|
| 2019 |
Sullivan AM, Arsovski AA, Thompson A, Sandstrom R, Thurman RE, Neph S, Johnson AK, Sullivan ST, Sabo PJ, Neri FV, Weaver M, Diegel M, Nemhauser JL, Stamatoyannopoulos JA, Bubb KL, et al. Mapping and Dynamics of Regulatory DNA in Maturing Siliques. Frontiers in Plant Science. 10: 1434. PMID 31798605 DOI: 10.3389/Fpls.2019.01434 |
0.812 |
|
| 2019 |
Galstyan A, Nemhauser JL. Auxin promotion of seedling growth via ARF5 is dependent on the brassinosteroid-regulated transcription factors BES1 and BEH4. Plant Direct. 3: e00166. PMID 31508562 DOI: 10.1002/pld3.166 |
0.83 |
|
| 2019 |
Hamm MO, Moss BL, Leydon AR, Gala HP, Lanctot A, Ramos R, Klaeser H, Lemmex AC, Zahler ML, Nemhauser JL, Wright RC. Accelerating structure-function mapping using the ViVa webtool to mine natural variation. Plant Direct. 3: e00147. PMID 31372596 DOI: 10.1002/pld3.147 |
0.767 |
|
| 2019 |
Wright RC, Nemhauser J. Plant Synthetic Biology: Quantifying the Known Unknowns and Discovering the Unknown Unknowns. Plant Physiology. PMID 30630870 DOI: 10.1104/Pp.18.01222 |
0.565 |
|
| 2018 |
Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nature Communications. 9: 4526. PMID 30375394 DOI: 10.1038/S41467-018-06977-6 |
0.806 |
|
| 2018 |
Khakhar A, Leydon AR, Lemmex AC, Klavins E, Nemhauser JL. Synthetic hormone-responsive transcription factors can monitor and re-program plant development. Elife. 7. PMID 29714687 DOI: 10.7554/Elife.34702 |
0.807 |
|
| 2018 |
Arsovski AA, Zemke J, Haagen BD, Kim SH, Nemhauser JL. Phytochrome B Regulates Resource Allocation in Brassica rapa. Journal of Experimental Botany. PMID 29514292 DOI: 10.1093/jxb/ery080 |
0.822 |
|
| 2017 |
Alexandre CM, Urton JR, Jean-Baptiste K, Huddleston JL, Dorrity MW, Cuperus JT, Sullivan AM, Bemm F, Jolic D, Arsovski AA, Thompson A, Nemhauser JL, Fields S, Weigel D, Bubb KL, et al. Complex relationships between chromatin accessibility, sequence divergence, and gene expression in A. thaliana. Molecular Biology and Evolution. PMID 29272536 DOI: 10.1093/Molbev/Msx326 |
0.791 |
|
| 2017 |
de Lange O, Klavins E, Nemhauser J. Synthetic genetic circuits in crop plants. Current Opinion in Biotechnology. 49: 16-22. PMID 28772191 DOI: 10.1016/J.Copbio.2017.07.003 |
0.363 |
|
| 2017 |
Wright RC, Zahler ML, Gerben SR, Nemhauser JL. Insights into the Evolution and Function of Auxin Signaling F-Box Proteins in Arabidopsis thaliana Through Synthetic Analysis of Natural Variants. Genetics. PMID 28760746 DOI: 10.1534/Genetics.117.300092 |
0.542 |
|
| 2017 |
Pierre-Jerome E, Wright RC, Nemhauser JL. Characterizing Auxin Response Circuits in Saccharomyces cerevisiae by Flow Cytometry. Methods in Molecular Biology (Clifton, N.J.). 1497: 271-281. PMID 27864773 DOI: 10.1007/978-1-4939-6469-7_22 |
0.786 |
|
| 2016 |
Guseman JM, Nemhauser JL, Moss BL. A Live-imaging, Heat Shock-inducible System to Measure Aux/IAA Degradation Rates in Planta. Bio-Protocol. 6. PMID 29725609 DOI: 10.21769/BioProtoc.1881 |
0.742 |
|
| 2016 |
Pierre-Jerome E, Moss BL, Lanctot A, Hageman A, Nemhauser JL. Functional analysis of molecular interactions in synthetic auxin response circuits. Proceedings of the National Academy of Sciences of the United States of America. PMID 27647902 DOI: 10.1073/Pnas.1604379113 |
0.805 |
|
| 2016 |
Dezfulian MH, Jalili E, Roberto DK, Moss BL, Khoo K, Nemhauser JL, Crosby WL. Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin Signaling in Arabidopsis. Plos Genetics. 12: e1006301. PMID 27618443 DOI: 10.1371/Journal.Pgen.1006301 |
0.738 |
|
| 2016 |
Nemhauser JL, Torii KU. Plant synthetic biology for molecular engineering of signalling and development. Nature Plants. 2: 16010. PMID 27249346 DOI: 10.1038/Nplants.2016.10 |
0.409 |
|
| 2016 |
Taylor-Teeples M, Lanctot A, Nemhauser JL. As above, so below: Auxin's role in lateral organ development. Developmental Biology. PMID 26994944 DOI: 10.1016/j.ydbio.2016.03.020 |
0.808 |
|
| 2015 |
Yu H, Zhang Y, Moss BL, Bargmann BO, Wang R, Prigge M, Nemhauser JL, Estelle M. Untethering the TIR1 auxin receptor from the SCF complex increases its stability and inhibits auxin response. Nature Plants. 1. PMID 27251894 DOI: 10.1038/nplants.2014.30 |
0.687 |
|
| 2015 |
Provart NJ, Alonso J, Assmann SM, Bergmann D, Brady SM, Brkljacic J, Browse J, Chapple C, Colot V, Cutler S, Dangl J, Ehrhardt D, Friesner JD, Frommer WB, Grotewold E, ... ... Nemhauser J, et al. 50 years of Arabidopsis research: highlights and future directions. The New Phytologist. PMID 26465351 DOI: 10.1111/Nph.13687 |
0.437 |
|
| 2015 |
Galli M, Liu Q, Moss BL, Malcomber S, Li W, Gaines C, Federici S, Roshkovan J, Meeley R, Nemhauser JL, Gallavotti A. Auxin signaling modules regulate maize inflorescence architecture. Proceedings of the National Academy of Sciences of the United States of America. PMID 26464512 DOI: 10.1073/Pnas.1516473112 |
0.739 |
|
| 2015 |
Yu H, Zhang Y, Moss BL, Bargmann BO, Wang R, Prigge M, Nemhauser JL, Estelle M. Untethering the TIR1 auxin receptor from the SCF complex increases its stability and inhibits auxin response. Nature Plants. 1. PMID 26236497 DOI: 10.1038/Nplants.2014.30 |
0.686 |
|
| 2015 |
Moss BL, Mao H, Guseman JM, Hinds TR, Hellmuth A, Kovenock M, Noorassa A, Lanctot A, Calderon Villalobos LI, Zheng N, Nemhauser J. Rate motifs tune Aux/IAA degradation dynamics. Plant Physiology. PMID 26149575 DOI: 10.1104/Pp.15.00587 |
0.824 |
|
| 2015 |
Khakhar A, Bolten NJ, Nemhauser J, Klavins E. Cell-Cell Communication in Yeast Using Auxin Biosynthesis and Auxin Responsive CRISPR Transcription Factors. Acs Synthetic Biology. PMID 26102245 DOI: 10.1021/Acssynbio.5B00064 |
0.799 |
|
| 2015 |
Ljung K, Nemhauser JL, Perata P. New mechanistic links between sugar and hormone signalling networks. Current Opinion in Plant Biology. 25: 130-7. PMID 26037392 DOI: 10.1016/j.pbi.2015.05.022 |
0.312 |
|
| 2015 |
Wright RC, Nemhauser JL. New tangles in the auxin signaling web. F1000prime Reports. 7: 19. PMID 25750737 DOI: 10.12703/P7-19 |
0.567 |
|
| 2015 |
Guseman JM, Hellmuth A, Lanctot A, Feldman TP, Moss BL, Klavins E, Calderón Villalobos LI, Nemhauser JL. Auxin-induced degradation dynamics set the pace for lateral root development. Development (Cambridge, England). 142: 905-9. PMID 25633353 DOI: 10.1242/Jcs.170464 |
0.823 |
|
| 2015 |
Wright RC, Nemhauser JL. New tangles in the auxin signaling web F1000prime Reports. 7. DOI: 10.12703/P7-19 |
0.357 |
|
| 2014 |
Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, ... ... Nemhauser JL, et al. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana. Cell Reports. 8: 2015-30. PMID 25220462 DOI: 10.1016/J.Celrep.2014.08.019 |
0.815 |
|
| 2014 |
Pierre-Jerome E, Jang SS, Havens KA, Nemhauser JL, Klavins E. Recapitulation of the forward nuclear auxin response pathway in yeast. Proceedings of the National Academy of Sciences of the United States of America. 111: 9407-12. PMID 24979769 DOI: 10.1073/Pnas.1324147111 |
0.829 |
|
| 2013 |
Pierre-Jerome E, Moss BL, Nemhauser JL. Tuning the auxin transcriptional response. Journal of Experimental Botany. 64: 2557-63. PMID 23630231 DOI: 10.1093/Jxb/Ert100 |
0.8 |
|
| 2013 |
Yu H, Moss BL, Jang SS, Prigge M, Klavins E, Nemhauser JL, Estelle M. Mutations in the TIR1 auxin receptor that increase affinity for auxin/indole-3-acetic acid proteins result in auxin hypersensitivity. Plant Physiology. 162: 295-303. PMID 23539280 DOI: 10.1104/Pp.113.215582 |
0.737 |
|
| 2013 |
Strader LC, Nemhauser JL. Auxin 2012: a rich mea ho'oulu. Development (Cambridge, England). 140: 1153-7. PMID 23444348 DOI: 10.1242/Dev.090530 |
0.313 |
|
| 2012 |
Havens KA, Guseman JM, Jang SS, Pierre-Jerome E, Bolten N, Klavins E, Nemhauser JL. A synthetic approach reveals extensive tunability of auxin signaling. Plant Physiology. 160: 135-42. PMID 22843664 DOI: 10.1104/Pp.112.202184 |
0.823 |
|
| 2012 |
Arsovski AA, Galstyan A, Guseman JM, Nemhauser JL. Photomorphogenesis. The Arabidopsis Book / American Society of Plant Biologists. 10: e0147. PMID 22582028 DOI: 10.1199/tab.0147 |
0.797 |
|
| 2012 |
Walcher CL, Nemhauser JL. Bipartite promoter element required for auxin response. Plant Physiology. 158: 273-82. PMID 22100645 DOI: 10.1104/pp.111.187559 |
0.338 |
|
| 2011 |
Stewart JL, Maloof JN, Nemhauser JL. PIF genes mediate the effect of sucrose on seedling growth dynamics. Plos One. 6: e19894. PMID 21625438 DOI: 10.1371/journal.pone.0019894 |
0.674 |
|
| 2010 |
Stewart JL, Nemhauser JL. Do trees grow on money? Auxin as the currency of the cellular economy. Cold Spring Harbor Perspectives in Biology. 2: a001420. PMID 20182619 DOI: 10.1101/cshperspect.a001420 |
0.341 |
|
| 2009 |
Kuppusamy KT, Chen AY, Nemhauser JL. Steroids are required for epidermal cell fate establishment in Arabidopsis roots. Proceedings of the National Academy of Sciences of the United States of America. 106: 8073-6. PMID 19416891 DOI: 10.1073/pnas.0811633106 |
0.784 |
|
| 2009 |
Kuppusamy KT, Walcher CL, Nemhauser JL. Cross-regulatory mechanisms in hormone signaling. Plant Molecular Biology. 69: 375-81. PMID 18726558 DOI: 10.1007/s11103-008-9389-2 |
0.802 |
|
| 2008 |
Vert G, Walcher CL, Chory J, Nemhauser JL. Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2. Proceedings of the National Academy of Sciences of the United States of America. 105: 9829-34. PMID 18599455 DOI: 10.1073/Pnas.0803996105 |
0.783 |
|
| 2008 |
Nemhauser JL. Dawning of a new era: photomorphogenesis as an integrated molecular network. Current Opinion in Plant Biology. 11: 4-8. PMID 18053757 DOI: 10.1016/j.pbi.2007.10.005 |
0.325 |
|
| 2006 |
Hong F, Breitling R, McEntee CW, Wittner BS, Nemhauser JL, Chory J. RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis. Bioinformatics (Oxford, England). 22: 2825-7. PMID 16982708 DOI: 10.1093/Bioinformatics/Btl476 |
0.467 |
|
| 2006 |
Nemhauser JL, Hong F, Chory J. Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell. 126: 467-75. PMID 16901781 DOI: 10.1016/J.Cell.2006.05.050 |
0.615 |
|
| 2005 |
Vert G, Nemhauser JL, Geldner N, Hong F, Chory J. Molecular mechanisms of steroid hormone signaling in plants. Annual Review of Cell and Developmental Biology. 21: 177-201. PMID 16212492 DOI: 10.1146/Annurev.Cellbio.21.090704.151241 |
0.827 |
|
| 2005 |
Nemhauser JL, Chory J. A new FronTIR in targeted protein degradation and plant development. Cell. 121: 970-2. PMID 15989947 DOI: 10.1016/J.Cell.2005.06.020 |
0.572 |
|
| 2004 |
Nemhauser JL, Mockler TC, Chory J. Interdependency of brassinosteroid and auxin signaling in Arabidopsis. Plos Biology. 2: E258. PMID 15328536 DOI: 10.1371/Journal.Pbio.0020258 |
0.758 |
|
| 2004 |
Nemhauser JL, Chory J. BRing it on: new insights into the mechanism of brassinosteroid action. Journal of Experimental Botany. 55: 265-70. PMID 14673032 DOI: 10.1093/Jxb/Erh024 |
0.601 |
|
| 2003 |
Nemhauser JL, Maloof JN, Chory J. Building integrated models of plant growth and development. Plant Physiology. 132: 436-9. PMID 12805576 DOI: 10.1104/Pp.102.017061 |
0.706 |
|
| 2002 |
Nemhauser J, Chory J. Photomorphogenesis. The Arabidopsis Book / American Society of Plant Biologists. 1: e0054. PMID 22303211 DOI: 10.1199/tab.0054 |
0.472 |
|
| 2002 |
Friedrichsen DM, Nemhauser J, Muramitsu T, Maloof JN, Alonso J, Ecker JR, Furuya M, Chory J. Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth Genetics. 162: 1445-1456. PMID 12454087 |
0.847 |
|
| 2000 |
Nemhauser JL, Feldman LJ, Zambryski PC. Auxin and ETTIN in Arabidopsis gynoecium morphogenesis. Development (Cambridge, England). 127: 3877-88. PMID 10952886 |
0.617 |
|
| 1998 |
Nemhauser JL, Zambryski PC, Roe JL. Auxin signaling in Arabidopsis flower development? Current Opinion in Plant Biology. 1: 531-5. PMID 10066636 DOI: 10.1016/S1369-5266(98)80047-2 |
0.593 |
|
| 1997 |
Sessions A, Nemhauser JL, McColl A, Roe JL, Feldmann KA, Zambryski PC. ETTIN patterns the Arabidopsis floral meristem and reproductive organs. Development (Cambridge, England). 124: 4481-91. PMID 9409666 |
0.599 |
|
| 1997 |
Roe JL, Nemhauser JL, Zambryski PC. TOUSLED participates in apical tissue formation during gynoecium development in Arabidopsis. The Plant Cell. 9: 335-53. PMID 9090879 DOI: 10.1105/Tpc.9.3.335 |
0.561 |
|
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