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Roshan Kumar, Ph.D - Publications

Affiliations: 
2012-2016 South Dacota State University 
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kumar R, Register K, Christopher-Hennings J, Moroni P, Gioia G, Garcia-Fernandez N, Nelson J, Jelinski MD, Lysnyansky I, Bayles D, Alt D, Scaria J. Population Genomic Analysis of Elucidates Geographical Variations and Genes associated with Host-Types. Microorganisms. 8. PMID 33050495 DOI: 10.3390/microorganisms8101561  0.88
2020 Nagar S, Talwar C, Haider S, Puri A, Ponnusamy K, Gupta M, Sood U, Bajaj A, Lal R, Kumar R. Phylogenetic Relationships and Potential Functional Attributes of the Genus : A Member of Family . Frontiers in Microbiology. 11: 1725. PMID 33013721 DOI: 10.3389/fmicb.2020.01725  1
2020 Biswas K, Tarafdar A, Kumar R, Singhvi N, Ghosh P, Sharma M, Pabbi S, Shukla P. Molecular Analysis of Disease-Responsive Genes Revealing the Resistance Potential Against Fusarium Wilt ( Butler) Dependent on Genotype Variability in the Leguminous Crop Pigeonpea. Frontiers in Genetics. 11: 862. PMID 32973868 DOI: 10.3389/fgene.2020.00862  1
2020 Kumar R, Bisht NC. Heterotrimeric Gα subunit regulates plant architecture, organ size and seed weight in the oilseed Brassica juncea. Plant Molecular Biology. PMID 32875468 DOI: 10.1007/s11103-020-01060-5  0.44
2020 Kumar R, Verma H, Singhvi N, Sood U, Gupta V, Singh M, Kumari R, Hira P, Nagar S, Talwar C, Nayyar N, Anand S, Rawat CD, Verma M, Negi RK, et al. Comparative Genomic Analysis of Rapidly Evolving SARS-CoV-2 Reveals Mosaic Pattern of Phylogeographical Distribution. Msystems. 5. PMID 32723797 DOI: 10.1128/mSystems.00505-20  1
2020 Gupta V, Kumar R, Sood U, Singhvi N. Reconciling Hygiene and Cleanliness: A New Perspective from Human Microbiome. Indian Journal of Microbiology. 60: 37-44. PMID 32089572 DOI: 10.1007/s12088-019-00839-5  1
2020 Kumar R, Sood U, Gupta V, Singh M, Scaria J, Lal R. Recent Advancements in the Development of Modern Probiotics for Restoring Human Gut Microbiome Dysbiosis. Indian Journal of Microbiology. 60: 12-25. PMID 32089570 DOI: 10.1007/s12088-019-00808-y  1
2020 Sood U, Gupta V, Kumar R, Lal S, Fawcett D, Rattan S, Poinern GEJ, Lal R. Chicken Gut Microbiome and Human Health: Past Scenarios, Current Perspectives, and Futuristic Applications. Indian Journal of Microbiology. 60: 2-11. PMID 32089569 DOI: 10.1007/s12088-019-00785-2  1
2020 Gupta V, Sood U, Kumar R, Lal R, Kalia VC. Microbiome: A New Lease to Microbiology. Indian Journal of Microbiology. 60: 1. PMID 32089568 DOI: 10.1007/s12088-019-00852-8  1
2020 Puri A, Bajaj A, Verma H, Kumar R, Singh Y, Lal R. Complete genome sequence of Paracoccus sp. strain AK26: Insights into multipartite genome architecture and methylotropy. Genomics. PMID 32057914 DOI: 10.1016/j.ygeno.2020.02.010  0.92
2020 Kumari R, Kumar R, Kumar S, Singh AK, Hanpude P, Jangir D, Maiti TK. Amyloid aggregates of the deubiquitinase OTUB1 are neurotoxic, suggesting that they contribute to the development of Parkinson's disease. The Journal of Biological Chemistry. PMID 32005664 DOI: 10.1074/jbc.RA119.009546  0.92
2020 Talwar C, Nagar S, Kumar R, Scaria J, Lal R, Negi RK. Defining the Environmental Adaptations of Genus Devosia: Insights into its Expansive Short Peptide Transport System and Positively Selected Genes. Scientific Reports. 10: 1151. PMID 31980727 DOI: 10.1038/s41598-020-58163-8  0.92
2019 Kumar R, Kumar S, Hanpude P, Singh AK, Johari T, Majumder S, Maiti TK. Partially oxidized DJ-1 inhibits α-synuclein nucleation and remodels mature α-synuclein fibrils in vitro. Communications Biology. 2: 395. PMID 31925242 DOI: 10.1038/s42003-019-0644-7  0.88
2019 Kumar R, Kumar S, Hanpude P, Singh AK, Johari T, Majumder S, Maiti TK. Partially oxidized DJ-1 inhibits α-synuclein nucleation and remodels mature α-synuclein fibrils in vitro. Communications Biology. 2: 395. PMID 31701024 DOI: 10.1038/s42003-019-0644-7  0.88
2019 Liu Y, Wu L, Kohli P, Kumar R, Stryhanyuk H, Nijenhuis I, Lal R, Richnow HH. Enantiomer and Carbon Isotope Fractionation of α-Hexachlorocyclohexane by Sphingobium indicum Strain B90A and the Corresponding Enzymes. Environmental Science & Technology. PMID 31266304 DOI: 10.1021/acs.est.9b01233  0.88
2019 Kumar R, Lee SG, Augustine R, Reichelt M, Vassão DG, Palavalli MH, Allen A, Gershenzon J, Jez JM, Bisht NC. Molecular Basis of the Evolution of Methylthioalkylmalate Synthase and Diversity of Methionine-Derived Glucosinolates. The Plant Cell. PMID 31023839 DOI: 10.1105/tpc.19.00046  0.44
2019 Thomas M, Wongkuna S, Ghimire S, Kumar R, Antony L, Doerner KC, Singery A, Nelson E, Woyengo T, Chankhamhaengdecha S, Janvilisri T, Scaria J. Gut Microbial Dynamics during Conventionalization of Germfree Chicken. Msphere. 4. PMID 30918057 DOI: 10.1128/mSphere.00035-19  0.88
2019 Sood U, Hira P, Kumar R, Bajaj A, Rao DLN, Lal R, Shakarad M. Comparative Genomic Analyses Reveal Core-Genome-Wide Genes Under Positive Selection and Major Regulatory Hubs in Outlier Strains of . Frontiers in Microbiology. 10: 53. PMID 30787911 DOI: 10.3389/fmicb.2019.00053  1
2018 Kumar R, Kumari R, Kumar S, Jangir DK, Maiti TK. Extracellular α-synuclein disrupts membrane nanostructure and promotes S-nitrosylation induced neuronal cell death. Biomacromolecules. PMID 29539261 DOI: 10.1021/acs.biomac.7b01727  0.68
2018 Sood U, Bajaj A, Kumar R, Khurana S, Kalia VC. Infection and Microbiome: Impact of Tuberculosis on Human Gut Microbiome of Indian Cohort. Indian Journal of Microbiology. 58: 123-125. PMID 29434408 DOI: 10.1007/s12088-018-0706-4  1
2018 Kumar R, Bisht NC. Duplicated RGS (Regulator of G-protein signaling) proteins exhibit conserved biochemical but differential transcriptional regulation of heterotrimeric G-protein signaling in Brassica species. Scientific Reports. 8: 2176. PMID 29391473 DOI: 10.1038/s41598-018-20500-3  0.44
2017 Verma H, Bajaj A, Kumar R, Kaur J, Anand S, Nayyar N, Puri A, Singh Y, Khurana JP, Lal R. Genome Organization of Sphingobium indicum B90A: An Archetypal Hexachlorocyclohexane (HCH) Degrading Genotype. Genome Biology and Evolution. 9: 2191-2197. PMID 28922869 DOI: 10.1093/gbe/evx133  0.92
2017 Kumar S, Jangir DK, Kumar R, Kumari M, Bhavesh N, Maiti TK. Role of sporadic Parkinson disease associated mutations A18T and A29S in enhanced alpha synuclein fibrillation and cytotoxicity. Acs Chemical Neuroscience. PMID 28841377 DOI: 10.1021/acschemneuro.6b00430  0.68
2017 Mahato NK, Gupta V, Singh P, Kumari R, Verma H, Tripathi C, Rani P, Sharma A, Singhvi N, Sood U, Hira P, Kohli P, Nayyar N, Puri A, Bajaj A, ... Kumar R, et al. Microbial taxonomy in the era of OMICS: application of DNA sequences, computational tools and techniques. Antonie Van Leeuwenhoek. PMID 28831610 DOI: 10.1007/s10482-017-0928-1  1
2017 Kumar R, Sharma A, Chandel I, Bisht NC. Pattern of expression and interaction specificity of multiple G-protein beta (Gβ) subunit isoforms with their potential target proteins reveal functional dominance of BjuGβ1 in the allotetraploid Brassica juncea. Plant Physiology and Biochemistry : Ppb. 118: 22-30. PMID 28603081 DOI: 10.1016/j.plaphy.2017.05.020  0.44
2017 Kumar R, Verma H, Haider S, Bajaj A, Sood U, Ponnusamy K, Nagar S, Shakarad MN, Negi RK, Singh Y, Khurana JP, Gilbert JA, Lal R. Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus Novosphingobium. Msystems. 2. PMID 28567447 DOI: 10.1128/mSystems.00020-17  1
2017 Kumar R, Biswas K, Singh PK, Singh PK, Elumalai S, Shukla P, Pabbi S. Lipid production and molecular dynamics simulation for regulation of accD gene in cyanobacteria under different N and P regimes. Biotechnology For Biofuels. 10: 94. PMID 28428819 DOI: 10.1186/s13068-017-0776-2  0.52
2017 Kumar R, Jangir DK, Verma G, Shekhar S, Hanpude P, Kumar S, Kumari R, Singh N, Sarovar Bhavesh N, Ranjan Jana N, Kanti Maiti T. S-nitrosylation of UCHL1 induces its structural instability and promotes α-synuclein aggregation. Scientific Reports. 7: 44558. PMID 28300150 DOI: 10.1038/srep44558  0.68
2016 Chandna R, Augustine R, Kanchupati P, Kumar R, Kumar P, Arya GC, Bisht NC. Class-Specific Evolution and Transcriptional Differentiation of 14-3-3 Family Members in Mesohexaploid Brassica rapa. Frontiers in Plant Science. 7: 12. PMID 26858736 DOI: 10.3389/fpls.2016.00012  0.44
2015 Dwivedi V, Kumari K, Gupta SK, Kumari R, Tripathi C, Lata P, Niharika N, Singh AK, Kumar R, Nigam A, Garg N, Lal R. Thermus parvatiensis RL(T) sp. nov., Isolated from a Hot Water Spring, Located Atop the Himalayan Ranges at Manikaran, India. Indian Journal of Microbiology. 55: 357-65. PMID 26543260 DOI: 10.1007/s12088-015-0538-4  0.92
2015 Verma H, Rani P, Singh AK, Kumar R, Dwivedi V, Negi V, Lal R. Sphingopyxis flava sp. nov., isolated from an hexachlorocyclohexane contaminated soil, India. International Journal of Systematic and Evolutionary Microbiology. PMID 26219279 DOI: 10.1099/ijsem.0.000482  0.92
2015 Kumar R, Dwivedi V, Nayyar N, Verma H, Singh AK, Rani P, Rao DL, Lal R. Parapedobacter indicus sp. nov., isolated from hexachlorocyclohexane-contaminated soil. International Journal of Systematic and Evolutionary Microbiology. 65: 129-34. PMID 25298380 DOI: 10.1099/ijs.0.069104-0  0.8
2014 Verma H, Kumar R, Oldach P, Sangwan N, Khurana JP, Gilbert JA, Lal R. Comparative genomic analysis of nine Sphingobium strains: insights into their evolution and hexachlorocyclohexane (HCH) degradation pathways. Bmc Genomics. 15: 1014. PMID 25418849 DOI: 10.1186/1471-2164-15-1014  0.8
2014 Kumar R, Arya GC, Bisht NC. Differential expression and interaction specificity of the heterotrimeric G-protein family in Brassica nigra reveal their developmental- and condition-specific roles Plant &Amp; Cell Physiology. 55: 1954-1968. PMID 25231958 DOI: 10.1093/pcp/pcu126  0.44
2014 Arya GC, Kumar R, Bisht NC. Evolution, expression differentiation and interaction specificity of heterotrimeric G-protein subunit gene family in the mesohexaploid brassica rapa Plos One. 9. PMID 25191920 DOI: 10.1371/journal.pone.0105771  0.44
2014 Nayyar N, Sangwan N, Kohli P, Verma H, Kumar R, Negi V, Oldach P, Mahato NK, Gupta V, Lal R. Hexachlorocyclohexane: persistence, toxicity and decontamination. Reviews On Environmental Health. 29: 49-52. PMID 24622782 DOI: 10.1515/reveh-2014-0015  1
2014 Singh AK, Garg N, Lata P, Kumar R, Negi V, Vikram S, Lal R. Pontibacter indicus sp. nov., isolated from hexachlorocyclohexane-contaminated soil. International Journal of Systematic and Evolutionary Microbiology. 64: 254-9. PMID 24052629 DOI: 10.1099/ijs.0.055319-0  0.92
2014 Sangwan N, Verma H, Kumar R, Negi V, Lax S, Khurana P, Khurana JP, Gilbert JA, Lal R. Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data. The Isme Journal. 8: 398-408. PMID 24030592 DOI: 10.1038/ismej.2013.153  0.8
2013 Kumar R, Dwivedi V, Negi V, Khurana JP, Lal R. Draft Genome Sequence of Sphingobium lactosutens Strain DS20T, Isolated from a Hexachlorocyclohexane Dumpsite. Genome Announcements. 1. PMID 24051323 DOI: 10.1128/genomeA.00753-13  0.92
2013 Mukherjee U, Kumar R, Mahato NK, Khurana JP, Lal R. Draft Genome Sequence of Sphingobium sp. Strain HDIPO4, an Avid Degrader of Hexachlorocyclohexane. Genome Announcements. 1. PMID 24051321 DOI: 10.1128/genomeA.00749-13  0.88
2013 Singh AK, Garg N, Sangwan N, Negi V, Kumar R, Vikram S, Lal R. Pontibacter ramchanderi sp. nov., isolated from hexachlorocyclohexane-contaminated pond sediment. International Journal of Systematic and Evolutionary Microbiology. 63: 2829-34. PMID 23315403 DOI: 10.1099/ijs.0.045948-0  0.92
2012 Negi V, Kumar R, Verma H, Sangwan N, Lal R. Titan cells: barriers to phagocytosis. Indian Journal of Microbiology. 52: 516. PMID 23997351 DOI: 10.1007/s12088-012-0300-0  0.92
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