Jo Handelsman - Publications

1985-2009 Bacteriology University of Wisconsin, Madison, Madison, WI 
 2010- Molecular, Cellular, and Developmental Biology Yale University, New Haven, CT 

143 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hurley A, Chevrette MG, Acharya DD, Lozano GL, Garavito M, Heinritz J, Balderrama L, Beebe M, DenHartog ML, Corinaldi K, Engels R, Gutierrez A, Jona O, Putnam JHI, Rhodes B, ... ... Handelsman J, et al. Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery. Mbio. 12. PMID 33593964 DOI: 10.1128/mBio.03432-20  1
2020 Lozano GL, Guan C, Cao Y, Borlee BR, Broderick NA, Stabb EV, Handelsman J. A Chemical Counterpunch: Chromobacterium violaceum ATCC 31532 Produces Violacein in Response to Translation-Inhibiting Antibiotics. Mbio. 11. PMID 32430474 DOI: 10.1128/Mbio.00948-20  1
2020 Chevrette MG, Handelsman J. From Metagenomes to Molecules: Innovations in Functional Metagenomics Unlock Hidden Chemistry in the Human Microbiome. Biochemistry. PMID 31977194 DOI: 10.1021/Acs.Biochem.0C00033  0.84
2020 Mongui A, Lozano GL, Handelsman J, Restrepo S, Junca H. Design and validation of a transposon that promotes expression of genes in episomal DNA. Journal of Biotechnology. 310: 1-5. PMID 31954761 DOI: 10.1016/J.Jbiotec.2020.01.007  1
2019 Sivakumar R, Ranjani J, Vishnu US, Jayashree S, Lozano GL, Miles J, Broderick NA, Guan C, Gunasekaran P, Handelsman J, Rajendhran J. Evaluation of INSeq To Identify Genes Essential for Pseudomonas aeruginosa PGPR2 Corn Root Colonization. G3 (Bethesda, Md.). 9: 651-661. PMID 33575765 DOI: 10.1534/g3.118.200928  1
2019 Lozano GL, Park HB, Bravo JI, Armstrong EA, Denu JM, Stabb EV, Broderick NA, Crawford JM, Handelsman J. Bacterial analogs of plant tetrahydropyridine alkaloids mediate microbial interactions in a rhizosphere model system. Applied and Environmental Microbiology. PMID 30877115 DOI: 10.1128/Aem.03058-18  1
2019 Lozano GL, Bravo JI, Garavito Diago MF, Park HB, Hurley A, Peterson SB, Stabb EV, Crawford JM, Broderick NA, Handelsman J. Introducing THOR, a Model Microbiome for Genetic Dissection of Community Behavior. Mbio. 10. PMID 30837345 DOI: 10.1128/Mbio.02846-18  1
2019 Sivakumar R, Ranjani J, Vishnu US, Jayashree S, Lozano GL, Miles J, Broderick NA, Guan C, Gunasekaran P, Handelsman J, Rajendhran J. Evaluation of InSeq To Identify Genes Essential for PGPR2 Corn Root Colonization. G3 (Bethesda, Md.). PMID 30705119 DOI: 10.1534/G3.118.200928  1
2017 Lozano GL, Bravo JI, Handelsman J. Draft Genome Sequence ofCI12, a"Hitchhiker" from the Soybean Rhizosphere. Genome Announcements. 5. PMID 28663293 DOI: 10.1128/Genomea.00570-17  1
2017 Bravo JI, Lozano GL, Handelsman J. Draft Genome Sequence of Flavobacterium johnsoniae CI04, an Isolate from the Soybean Rhizosphere. Genome Announcements. 5. PMID 28126949 DOI: 10.1128/Genomea.01535-16  1
2017 Fischer C, Trautman EP, Crawford JM, Stabb EV, Handelsman J, Broderick NA. Metabolite exchange between microbiome members produces compounds that influence Drosophila behavior. Elife. 6. PMID 28068220 DOI: 10.7554/Elife.18855  1
2016 Lozano GL, Holt J, Ravel J, Rasko DA, Thomas MG, Handelsman J. Draft Genome Sequence of Biocontrol Agent Bacillus cereus UW85. Genome Announcements. 4. PMID 27587823 DOI: 10.1128/Genomea.00910-16  1
2016 Stulberg ER, Lozano GL, Morin JB, Park H, Baraban EG, Mlot C, Heffelfinger C, Phillips GM, Rush JS, Phillips AJ, Broderick NA, Thomas MG, Stabb EV, Handelsman J. Genomic and Secondary Metabolite Analyses of Streptomyces sp. 2AW Provide Insight into the Evolution of the Cycloheximide Pathway. Frontiers in Microbiology. 7: 573. PMID 27199910 DOI: 10.3389/Fmicb.2016.00573  1
2016 Fischer CN, Trautman EP, Crawford JM, Stabb EV, Handelsman J, Broderick NA. Author response: Metabolite exchange between microbiome members produces compounds that influence Drosophila behavior Elife. DOI: 10.7554/Elife.18855.062  1
2015 Allen HK, An R, Handelsman J, Moe LA. A response regulator from a soil metagenome enhances resistance to the β-lactam antibiotic carbenicillin in Escherichia coli. Plos One. 10: e0120094. PMID 25782011 DOI: 10.1371/Journal.Pone.0120094  1
2015 Holt JF, Kiedrowski MR, Frank KL, Du J, Guan C, Broderick NA, Dunny GM, Handelsman J. Enterococcus faecalis 6-phosphogluconolactonase is required for both commensal and pathogenic interactions with Manduca sexta. Infection and Immunity. 83: 396-404. PMID 25385794 DOI: 10.1128/Iai.02442-14  1
2015 Miles J, Holt JF, Handelsman J. Allies and adversaries: Roles of the microbiome in infectious disease: Studying how nonnative pathogens and host-associated microbial communities interact help us better understand infectious diseases Microbe. 10: 375-380. DOI: 10.1128/Microbe.10.370.1  1
2014 Udikovic-Kolic N, Wichmann F, Broderick NA, Handelsman J. Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization. Proceedings of the National Academy of Sciences of the United States of America. 111: 15202-7. PMID 25288759 DOI: 10.1073/Pnas.1409836111  1
2014 Shade A, Jones SE, Caporaso JG, Handelsman J, Knight R, Fierer N, Gilbert JA. Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity. Mbio. 5: e01371-14. PMID 25028427 DOI: 10.1128/Mbio.01371-14  1
2014 Moss-Racusin CA, van der Toorn J, Dovidio JF, Brescoll VL, Graham MJ, Handelsman J. Social science. Scientific diversity interventions. Science (New York, N.Y.). 343: 615-6. PMID 24503840 DOI: 10.1126/Science.1245936  1
2014 Casadevall A, Handelsman J. The presence of female conveners correlates with a higher proportion of female speakers at scientific symposia. Mbio. 5: e00846-13. PMID 24399856 DOI: 10.1128/Mbio.00846-13  1
2013 Blum JE, Fischer CN, Miles J, Handelsman J. Frequent replenishment sustains the beneficial microbiome of Drosophila melanogaster. Mbio. 4: e00860-13. PMID 24194543 DOI: 10.1128/Mbio.00860-13  1
2013 Graham MJ, Frederick J, Byars-Winston A, Hunter AB, Handelsman J. Science education. Increasing persistence of college students in STEM. Science (New York, N.Y.). 341: 1455-6. PMID 24072909 DOI: 10.1126/Science.1240487  1
2013 Shade A, Klimowicz AK, Spear RN, Linske M, Donato JJ, Hogan CS, McManus PS, Handelsman J. Streptomycin application has no detectable effect on bacterial community structure in apple orchard soil. Applied and Environmental Microbiology. 79: 6617-25. PMID 23974143 DOI: 10.1128/Aem.02017-13  1
2013 Baraban EG, Morin JB, Phillips GM, Phillips AJ, Strobel SA, Handelsman J. Xyolide, a bioactive nonenolide from an Amazonian endophytic fungus, Xylaria feejeensis. Tetrahedron Letters. 54: 4058-4060. PMID 23913990 DOI: 10.1016/J.Tetlet.2013.05.093  1
2013 Shade A, Caporaso JG, Handelsman J, Knight R, Fierer N. A meta-analysis of changes in bacterial and archaeal communities with time. The Isme Journal. 7: 1493-506. PMID 23575374 DOI: 10.1038/Ismej.2013.54  1
2013 Al-Gazali L, Valian V, Barres B, Andrei EY, Wu LA, Handelsman J, Moss-Racusin C, Husu L. Laboratory life: Scientists of the world speak up for equality. Nature. 495: 35-38. PMID 23467153 DOI: 10.1038/495035a  1
2013 Shade A, McManus PS, Handelsman J. Unexpected diversity during community succession in the apple flower microbiome. Mbio. 4. PMID 23443006 DOI: 10.1128/Mbio.00602-12  1
2012 Shade A, Peter H, Allison SD, Baho DL, Berga M, Bürgmann H, Huber DH, Langenheder S, Lennon JT, Martiny JB, Matulich KL, Schmidt TM, Handelsman J. Fundamentals of microbial community resistance and resilience. Frontiers in Microbiology. 3: 417. PMID 23267351 DOI: 10.3389/Fmicb.2012.00417  1
2012 Moss-Racusin CA, Dovidio JF, Brescoll VL, Graham MJ, Handelsman J. Science faculty's subtle gender biases favor male students. Proceedings of the National Academy of Sciences of the United States of America. 109: 16474-9. PMID 22988126 DOI: 10.1073/Pnas.1211286109  1
2012 Shade A, Hogan CS, Klimowicz AK, Linske M, McManus PS, Handelsman J. Culturing captures members of the soil rare biosphere. Environmental Microbiology. 14: 2247-52. PMID 22788977 DOI: 10.1111/J.1462-2920.2012.02817.X  1
2012 McMahon MD, Guan C, Handelsman J, Thomas MG. Metagenomic analysis of Streptomyces lividans reveals host-dependent functional expression. Applied and Environmental Microbiology. 78: 3622-9. PMID 22427497 DOI: 10.1128/Aem.00044-12  1
2012 Shade A, Handelsman J. Beyond the Venn diagram: the hunt for a core microbiome. Environmental Microbiology. 14: 4-12. PMID 22004523 DOI: 10.1111/J.1462-2920.2011.02585.X  1
2011 Rios-Velazquez C, Williamson LL, Cloud-Hansen KA, Allen HK, McMahon MD, Sabree ZL, Donato JJ, Handelsman J. Summer workshop in metagenomics: one week plus eight students equals gigabases of cloned DNA. Journal of Microbiology & Biology Education. 12: 120-6. PMID 23653755 DOI: 10.1128/Jmbe.V12I2.177  1
2011 Anderson WA, Amasino RM, Ares M, Banerjee U, Bartel B, Corces VG, Drennan CL, Elgin SC, Epstein IR, Fanning E, Guillette LJ, Handelsman J, Hatfull GF, Hoy RR, Kelley D, et al. Competencies: a cure for pre-med curriculum. Science (New York, N.Y.). 334: 760-1. PMID 22076362 DOI: 10.1126/Science.334.6057.760-B  1
2011 de Castro AP, Quirino BF, Allen H, Williamson LL, Handelsman J, Krüger RH. Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content. Biotechnology Letters. 33: 2169-75. PMID 21748362 DOI: 10.1007/S10529-011-0693-6  1
2011 Mason KL, Stepien TA, Blum JE, Holt JF, Labbe NH, Rush JS, Raffa KF, Handelsman J. From commensal to pathogen: translocation of Enterococcus faecalis from the midgut to the hemocoel of Manduca sexta. Mbio. 2: e00065-11. PMID 21586646 DOI: 10.1128/Mbio.00065-11  1
2011 Anderson WA, Banerjee U, Drennan CL, Elgin SC, Epstein IR, Handelsman J, Hatfull GF, Losick R, O'Dowd DK, Olivera BM, Strobel SA, Walker GC, Warner IM. Science education. Changing the culture of science education at research universities. Science (New York, N.Y.). 331: 152-3. PMID 21233371 DOI: 10.1126/Science.1198280  1
2011 Maloy S, Handelsman J, Singh S. Dynamics of host-associated microbial communities: Studying microbial communities will deepen our understanding of biology and provide tangible health benefits Microbe. 6: 21-25. DOI: 10.1128/Microbe.6.21.1  1
2010 Borlee BR, Geske GD, Blackwell HE, Handelsman J. Identification of synthetic inducers and inhibitors of the quorum-sensing regulator LasR in Pseudomonas aeruginosa by high-throughput screening. Applied and Environmental Microbiology. 76: 8255-8. PMID 20935125 DOI: 10.1128/Aem.00499-10  1
2010 Klimowicz AK, Benson TA, Handelsman J. A quadruple-enterotoxin-deficient mutant of Bacillus thuringiensis remains insecticidal. Microbiology (Reading, England). 156: 3575-83. PMID 20829288 DOI: 10.1099/Mic.0.039925-0  1
2010 Schloss PD, Allen HK, Klimowicz AK, Mlot C, Gross JA, Savengsuksa S, McEllin J, Clardy J, Ruess RW, Handelsman J. Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin. Dna and Cell Biology. 29: 533-41. PMID 20626288 DOI: 10.1089/Dna.2010.1020  1
2010 Broderick NA, Vasquez E, Handelsman J, Raffa KF. Effect of clonal variation among hybrid poplars on susceptibility of gypsy moth (Lepidoptera: Lymantriidae) to Bacillus thuringiensis subsp. kurstaki. Journal of Economic Entomology. 103: 718-25. PMID 20568617 DOI: 10.1603/Ec09377  1
2010 Sheridan JT, Fine E, Pribbenow CM, Handelsman J, Carnes M. Searching for excellence & diversity: increasing the hiring of women faculty at one academic medical center. Academic Medicine : Journal of the Association of American Medical Colleges. 85: 999-1007. PMID 20505400 DOI: 10.1097/Acm.0B013E3181Dbf75A  1
2010 Donato JJ, Moe LA, Converse BJ, Smart KD, Berklein FC, McManus PS, Handelsman J. Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins. Applied and Environmental Microbiology. 76: 4396-401. PMID 20453147 DOI: 10.1128/Aem.01763-09  1
2010 Broderick NA, Raffa KF, Handelsman J. Chemical modulators of the innate immune response alter gypsy moth larval susceptibility to Bacillus thuringiensis. Bmc Microbiology. 10: 129. PMID 20423490 DOI: 10.1186/1471-2180-10-129  1
2010 Allen HK, Donato J, Wang HH, Cloud-Hansen KA, Davies J, Handelsman J. Call of the wild: antibiotic resistance genes in natural environments. Nature Reviews. Microbiology. 8: 251-9. PMID 20190823 DOI: 10.1038/Nrmicro2312  1
2010 Robinson CJ, Schloss P, Ramos Y, Raffa K, Handelsman J. Robustness of the bacterial community in the cabbage white butterfly larval midgut. Microbial Ecology. 59: 199-211. PMID 19924467 DOI: 10.1007/S00248-009-9595-8  1
2009 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Parsley LC, Goodman RM, Handelsman J. Isolation and cloning of high-molecular-weight metagenomic DNA from soil microorganisms. Cold Spring Harbor Protocols. 2009: pdb.prot5271. PMID 20147247 DOI: 10.1101/Pdb.Prot5271  1
2009 Klepzig KD, Adams AS, Handelsman J, Raffa KF. Symbioses: a key driver of insect physiological processes, ecological interactions, evolutionary diversification, and impacts on humans. Environmental Entomology. 38: 67-77. PMID 19791599 DOI: 10.1603/022.038.0109  1
2009 Pfund C, Miller S, Brenner K, Bruns P, Chang A, Ebert-May D, Fagen AP, Gentile J, Gossens S, Khan IM, Labov JB, Pribbenow CM, Susman M, Tong L, Wright R, ... ... Handelsman J, et al. Professional development. Summer institute to improve university science teaching. Science (New York, N.Y.). 324: 470-1. PMID 19390031 DOI: 10.1126/Science.1170015  1
2009 Broderick NA, Robinson CJ, McMahon MD, Holt J, Handelsman J, Raffa KF. Contributions of gut bacteria to Bacillus thuringiensis-induced mortality vary across a range of Lepidoptera. Bmc Biology. 7: 11. PMID 19261175 DOI: 10.1186/1741-7007-7-11  1
2009 Allen HK, Cloud-Hansen KA, Wolinski JM, Guan C, Greene S, Lu S, Boeyink M, Broderick NA, Raffa KF, Handelsman J. Resident microbiota of the gypsy moth midgut harbors antibiotic resistance determinants. Dna and Cell Biology. 28: 109-17. PMID 19206998 DOI: 10.1089/Dna.2008.0812  1
2009 Allen HK, Moe LA, Rodbumrer J, Gaarder A, Handelsman J. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil. The Isme Journal. 3: 243-51. PMID 18843302 DOI: 10.1038/Ismej.2008.86  1
2008 Vasanthakumar A, Handelsman J, Schloss PD, Bauer LS, Raffa KF. Gut microbiota of an invasive subcortical beetle, Agrilus planipennis Fairmaire, across various life stages. Environmental Entomology. 37: 1344-53. PMID 19036215 DOI: 10.1603/0046-225X(2008)37[1344:Gmoais]2.0.Co;2  1
2008 Cloud-Hansen KA, Kuehner JN, Tong L, Miller S, Handelsman J. Money, sex, and drugs: a case study to teach the genetics of antibiotic resistance. Cbe Life Sciences Education. 7: 302-9. PMID 18765752 DOI: 10.1187/Cbe.07-12-0099  1
2008 Borlee BR, Geske GD, Robinson CJ, Blackwell HE, Handelsman J. Quorum-sensing signals in the microbial community of the cabbage white butterfly larval midgut. The Isme Journal. 2: 1101-11. PMID 18650927 DOI: 10.1038/Ismej.2008.70  1
2008 Little AE, Robinson CJ, Peterson SB, Raffa KF, Handelsman J. Rules of engagement: interspecies interactions that regulate microbial communities. Annual Review of Microbiology. 62: 375-401. PMID 18544040 DOI: 10.1146/Annurev.Micro.030608.101423  1
2008 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J. Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms. Applied and Environmental Microbiology. 74: 3302-5. PMID 18359830 DOI: 10.1128/Aem.02630-07  1
2008 Schloss PD, Handelsman J. A statistical toolbox for metagenomics: assessing functional diversity in microbial communities. Bmc Bioinformatics. 9: 34. PMID 18215273 DOI: 10.1186/1471-2105-9-34  1
2008 Isenbarger TA, Finney M, Ríos-Velázquez C, Handelsman J, Ruvkun G. Miniprimer PCR, a new lens for viewing the microbial world. Applied and Environmental Microbiology. 74: 840-9. PMID 18083877 DOI: 10.1128/Aem.01933-07  1
2007 Handelsman J, Birgeneau R. Women advancing science Dna and Cell Biology. 26: 763-764. PMID 17999624 DOI: 10.1089/dna.2007.1503  1
2007 Cloud-Hansen KA, Villiard KM, Handelsman J, Carey HV. Thirteen-lined ground squirrels (Spermophilus tridecemlineatus) harbor multiantibiotic-resistant bacteria. Journal of the American Association For Laboratory Animal Science : Jaalas. 46: 21-3. PMID 17487947  1
2007 Schloss PD, Handelsman J. The last word: books as a statistical metaphor for microbial communities. Annual Review of Microbiology. 61: 23-34. PMID 17439361 DOI: 10.1146/Annurev.Micro.61.011507.151712  1
2007 Guan C, Ju J, Borlee BR, Williamson LL, Shen B, Raffa KF, Handelsman J. Signal mimics derived from a metagenomic analysis of the gypsy moth gut microbiota. Applied and Environmental Microbiology. 73: 3669-76. PMID 17435000 DOI: 10.1128/Aem.02617-06  1
2006 Schloss PD, Handelsman J. Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures. Applied and Environmental Microbiology. 72: 6773-9. PMID 17021230 DOI: 10.1128/Aem.00474-06  1
2006 Broderick NA, Raffa KF, Handelsman J. Midgut bacteria required for Bacillus thuringiensis insecticidal activity. Proceedings of the National Academy of Sciences of the United States of America. 103: 15196-9. PMID 17005725 DOI: 10.1073/Pnas.0604865103  1
2006 Chan YA, Boyne MT, Podevels AM, Klimowicz AK, Handelsman J, Kelleher NL, Thomas MG. Hydroxymalonyl-acyl carrier protein (ACP) and aminomalonyl-ACP are two additional type I polyketide synthase extender units. Proceedings of the National Academy of Sciences of the United States of America. 103: 14349-54. PMID 16983083 DOI: 10.1073/Pnas.0603748103  1
2006 Cloud-Hansen KA, Peterson SB, Stabb EV, Goldman WE, McFall-Ngai MJ, Handelsman J. Breaching the great wall: peptidoglycan and microbial interactions. Nature Reviews. Microbiology. 4: 710-6. PMID 16894338 DOI: 10.1038/Nrmicro1486  1
2006 Peterson SB, Dunn AK, Klimowicz AK, Handelsman J. Peptidoglycan from Bacillus cereus mediates commensalism with rhizosphere bacteria from the Cytophaga-Flavobacterium group. Applied and Environmental Microbiology. 72: 5421-7. PMID 16885294 DOI: 10.1128/Aem.02928-05  1
2006 Schloss PD, Handelsman J. Toward a census of bacteria in soil. Plos Computational Biology. 2: e92. PMID 16848637 DOI: 10.1371/Journal.Pcbi.0020092  1
2006 Sabree ZL, Bergendahl V, Liles MR, Burgess RR, Goodman RM, Handelsman J. Identification and characterization of the gene encoding the Acidobacterium capsulatum major sigma factor. Gene. 376: 144-51. PMID 16698197 DOI: 10.1016/J.Gene.2006.02.033  1
2006 Schloss PD, Handelsman J. Introducing TreeClimber, a test to compare microbial community structures. Applied and Environmental Microbiology. 72: 2379-84. PMID 16597933 DOI: 10.1128/Aem.72.4.2379-2384.2006  1
2006 Schloss PD, Delalibera I, Handelsman J, Raffa KF. Bacteria associated with the guts of two wood-boring beetles: Anoplophora glabripennis and Saperda vestita (Cerambycidae) Environmental Entomology. 35: 625-629. DOI: 10.1603/0046-225X-35.3.625  1
2006 Sheridan J, Brennan PF, Carnes M, Handelsman J. Discovering directions for change in higher education through the experiences of senior women faculty Journal of Technology Transfer. 31: 387-396. DOI: 10.1007/S10961-006-7210-4  1
2005 Williamson LL, Borlee BR, Schloss PD, Guan C, Allen HK, Handelsman J. Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor. Applied and Environmental Microbiology. 71: 6335-44. PMID 16204555 DOI: 10.1128/Aem.71.10.6335-6344.2005  1
2005 Handelsman J, Cantor N, Carnes M, Denton D, Fine E, Grosz B, Hinshaw V, Marrett C, Rosser S, Shalala D, Sheridan J. Careers in science. More women in science. Science (New York, N.Y.). 309: 1190-1. PMID 16109868 DOI: 10.1126/Science.1113252  1
2005 Schloss PD, Handelsman J. Metagenomics for studying unculturable microorganisms: cutting the Gordian knot. Genome Biology. 6: 229. PMID 16086859 DOI: 10.1186/Gb-2005-6-8-229  1
2005 Schloss PD, Handelsman J. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Applied and Environmental Microbiology. 71: 1501-6. PMID 15746353 DOI: 10.1128/Aem.71.3.1501-1506.2005  1
2005 Delalibera I, Handelsman J, Raffa KF. Contrasts in cellulolytic activities of gut microorganisms between the wood borer, Saperda vestita (Coleoptera: Cerambycidae), and the bark beetles, Ips pini and Dendroctonus frontalis (Coleoptera: Curculionidae) Environmental Entomology. 34: 541-547. DOI: 10.1603/0046-225X-34.3.541  1
2004 Schloss PD, Handelsman J. Status of the microbial census. Microbiology and Molecular Biology Reviews : Mmbr. 68: 686-91. PMID 15590780 DOI: 10.1128/Mmbr.68.4.686-691.2004  1
2004 Riesenfeld CS, Schloss PD, Handelsman J. Metagenomics: genomic analysis of microbial communities. Annual Review of Genetics. 38: 525-52. PMID 15568985 DOI: 10.1146/Annurev.Genet.38.072902.091216  1
2004 Schloss PD, Larget BR, Handelsman J. Integration of microbial ecology and statistics: a test to compare gene libraries. Applied and Environmental Microbiology. 70: 5485-92. PMID 15345436 DOI: 10.1128/Aem.70.9.5485-5492.2004  1
2004 Riesenfeld CS, Goodman RM, Handelsman J. Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environmental Microbiology. 6: 981-9. PMID 15305923 DOI: 10.1111/J.1462-2920.2004.00664.X  1
2004 Handelsman J, Ebert-May D, Beichner R, Bruns P, Chang A, DeHaan R, Gentile J, Lauffer S, Stewart J, Tilghman SM, Wood WB. Education. Scientific teaching. Science (New York, N.Y.). 304: 521-2. PMID 15105480 DOI: 10.1126/Science.1096022  1
2004 Broderick NA, Raffa KF, Goodman RM, Handelsman J. Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods. Applied and Environmental Microbiology. 70: 293-300. PMID 14711655 DOI: 10.1128/Aem.70.1.293-300.2004  1
2004 Emmert EA, Klimowicz AK, Thomas MG, Handelsman J. Genetics of zwittermicin a production by Bacillus cereus. Applied and Environmental Microbiology. 70: 104-13. PMID 14711631 DOI: 10.1128/Aem.70.1.104-113.2004  1
2003 Schloss PD, Handelsman J. Biotechnological prospects from metagenomics. Current Opinion in Biotechnology. 14: 303-10. PMID 12849784 DOI: 10.1016/S0958-1669(03)00067-3  1
2003 Liles MR, Manske BF, Bintrim SB, Handelsman J, Goodman RM. A census of rRNA genes and linked genomic sequences within a soil metagenomic library. Applied and Environmental Microbiology. 69: 2684-91. PMID 12732537 DOI: 10.1128/Aem.69.5.2684-2691.2003  1
2003 Dunn AK, Klimowicz AK, Handelsman J. Use of a promoter trap to identify Bacillus cereus genes regulated by tomato seed exudate and a rhizosphere resident, Pseudomonas aureofaciens. Applied and Environmental Microbiology. 69: 1197-205. PMID 12571047 DOI: 10.1128/Aem.69.2.1197-1205.2003  1
2003 Handelsman J, Smalla K. Techniques: Conversations with the silent majority Current Opinion in Microbiology. 6: 271-273. DOI: 10.1016/S1369-5274(03)00062-6  1
2002 Dunn AK, Handelsman J. Toward an understanding of microbial communities through analysis of communication networks. Antonie Van Leeuwenhoek. 81: 565-74. PMID 12448752 DOI: 10.1023/A:1020565807627  1
2002 Gillespie DE, Brady SF, Bettermann AD, Cianciotto NP, Liles MR, Rondon MR, Clardy J, Goodman RM, Handelsman J. Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA. Applied and Environmental Microbiology. 68: 4301-6. PMID 12200279 DOI: 10.1128/Aem.68.9.4301-4306.2002  1
2002 Handelsman J, Wackett LP. Ecology and industrial microbiology: Microbial diversity - sustaining the Earth and industry. Current Opinion in Microbiology. 5: 237-9. PMID 12057675 DOI: 10.1016/S1369-5274(02)00331-4  1
2002 Handelsman J, Liles M, Mann D, Riesenfeld C, Goodman RM. Cloning the metagenome: Culture-independent access to thediversity and functions of the uncultivated microbial world Methods in Microbiology. 33: 241-255. DOI: 10.1016/S0580-9517(02)33014-9  1
2001 Brady SF, Chao CJ, Handelsman J, Clardy J. Cloning and heterologous expression of a natural product biosynthetic gene cluster from eDNA. Organic Letters. 3: 1981-4. PMID 11418029 DOI: 10.1021/Ol015949K  1
2001 Simon HM, Smith KP, Dodsworth JA, Guenthner B, Handelsman J, Goodman RM. Influence of tomato genotype on growth of inoculated and indigenous bacteria in the spermosphere. Applied and Environmental Microbiology. 67: 514-20. PMID 11157211 DOI: 10.1128/Aem.67.2.514-520.2001  1
2000 Kazmar ER, Goodman RM, Grau CR, Johnson DW, Nordheim EV, Undersander DJ, Handelsman J. Regression Analyses for Evaluating the Influence of Bacillus cereus on Alfalfa Yield Under Variable Disease Intensity. Phytopathology. 90: 657-65. PMID 18944546 DOI: 10.1094/Phyto.2000.90.6.657  1
2000 Bittinger MA, Gross JA, Widom J, Clardy J, Handelsman J. Rhizobium etli CE3 carries vir gene homologs on a self-transmissible plasmid. Molecular Plant-Microbe Interactions : Mpmi. 13: 1019-21. PMID 10975659 DOI: 10.1094/Mpmi.2000.13.9.1019  1
2000 Rondon MR, August PR, Bettermann AD, Brady SF, Grossman TH, Liles MR, Loiacono KA, Lynch BA, MacNeil IA, Minor C, Tiong CL, Gilman M, Osburne MS, Clardy J, Handelsman J, et al. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms. Applied and Environmental Microbiology. 66: 2541-7. PMID 10831436 DOI: 10.1128/Aem.66.6.2541-2547.2000  1
1999 Raffel SJ, Kazmar ER, Winberg R, Oplinger ES, Handelsman J, Goodman RM, Grau CR. First Report of Root Rot of Soybeans Caused by Corynespora cassiicola in Wisconsin. Plant Disease. 83: 696. PMID 30845632 DOI: 10.1094/Pdis.1999.83.7.696B  1
1999 Stohl EA, Milner JL, Handelsman J. Zwittermicin A biosynthetic cluster Gene. 237: 403-411. PMID 10521664 DOI: 10.1016/S0378-1119(99)00315-7  1
1999 Rondon MR, Goodman RM, Handelsman J. The Earth's bounty: assessing and accessing soil microbial diversity. Trends in Biotechnology. 17: 403-9. PMID 10481172 DOI: 10.1016/S0167-7799(99)01352-9  1
1999 Stohl EA, Brady SF, Clardy J, Handelsman J. ZmaR, a novel and widespread antibiotic resistance determinant that acetylates zwittermicin A. Journal of Bacteriology. 181: 5455-60. PMID 10464220 DOI: 10.1128/Jb.181.17.5455-5460.1999  1
1999 Rondon MR, Raffel SJ, Goodman RM, Handelsman J. Toward functional genomics in bacteria: analysis of gene expression in Escherichia coli from a bacterial artificial chromosome library of Bacillus cereus. Proceedings of the National Academy of Sciences of the United States of America. 96: 6451-5. PMID 10339608 DOI: 10.1073/Pnas.96.11.6451  1
1999 Smith KP, Handelsman J, Goodman RM. Genetic basis in plants for interactions with disease-suppressive bacteria. Proceedings of the National Academy of Sciences of the United States of America. 96: 4786-90. PMID 10220371 DOI: 10.1073/Pnas.96.9.4786  1
1999 Shang H, Chen J, Handelsman J, Goodman RM. Behavior of pythium Torulosum zoospores during their interaction with tobacco roots and Bacillus cereus. Current Microbiology. 38: 199-204. PMID 10069854 DOI: 10.1007/Pl00006787  1
1999 Dunn AK, Handelsman J. A vector for promoter trapping in Bacillus cereus. Gene. 226: 297-305. PMID 9931504 DOI: 10.1016/S0378-1119(98)00544-7  1
1998 Emmert EAB, Milner JL, Lee JC, Pulvermacher KL, Olivares HA, Clardy J, Handelsman J. Effect of canavanine from alfalfa seeds on the population biology of bacillus cereus Applied and Environmental Microbiology. 64: 4683-8. PMID 9835549 DOI: 10.1128/Aem.64.12.4683-4688.1998  1
1998 Handelsman J, Rondon MR, Brady SF, Clardy J, Goodman RM. Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chemistry & Biology. 5: R245-9. PMID 9818143 DOI: 10.1016/S1074-5521(98)90108-9  1
1998 O'Connell KP, Raffel SJ, Saville BJ, Handelsman J. Mutants of Rhizobium tropici strain CIAT899 that do not induce chlorosis in plants. Microbiology (Reading, England). 144: 2607-17. PMID 9782510 DOI: 10.1099/00221287-144-9-2607  1
1998 Silo-Suh LA, Stabb EV, Raffel SJ, Handelsman J. Target range of zwittermicin A, an aminopolyol antibiotic from Bacillus cereus. Current Microbiology. 37: 6-11. PMID 9625782 DOI: 10.1007/S002849900328  1
1998 Stabb EV, Handelsman J. Genetic analysis of zwittermicin A resistance in Escherichia coli: effects on membrane potential and RNA polymerase. Molecular Microbiology. 27: 311-22. PMID 9484887 DOI: 10.1046/J.1365-2958.1998.00678.X  1
1997 Smith KP, Handelsman J, Goodman RM. Modeling dose-response relationships in biological control: partitioning host responses to the pathogen and biocontrol agent. Phytopathology. 87: 720-9. PMID 18945094 DOI: 10.1094/Phyto.1997.87.7.720  1
1997 Bittinger MA, Milner JL, Saville BJ, Handelsman J. rosR, A determinant of nodulation competitiveness in Rhizobium etli Molecular Plant-Microbe Interactions. 10: 180-186. PMID 9057324 DOI: 10.1094/Mpmi.1997.10.2.180  1
1997 Bintrim SB, Donohue TJ, Handelsman J, Roberts GP, Goodman RM. Molecular phylogeny of Archaea from soil. Proceedings of the National Academy of Sciences of the United States of America. 94: 277-82. PMID 8990199 DOI: 10.1073/Pnas.94.1.277  1
1996 Handelsman J, Stabb EV. Biocontrol of Soilborne Plant Pathogens. The Plant Cell. 8: 1855-1869. PMID 12239367 DOI: 10.1105/Tpc.8.10.1855  1
1996 Raffel SJ, Stabb EV, Milner JL, Handelsman J. Genotypic and phenotypic analysis of zwittermicin A-producing strains of Bacillus cereus Microbiology. 142: 3425-3436. PMID 9004505 DOI: 10.1099/13500872-142-12-3425  1
1996 Milner JL, Stohl EA, Handelsman JO. Zwittermicin A resistance gene from Bacillus cereus Journal of Bacteriology. 178: 4266-4272. PMID 8763956  1
1996 Milner JL, Silo-Suh L, Lee JC, Haiyin HE, Clardy J, Handelsman JO. Production of kanosamine by Bacillus cereus UW85 Applied and Environmental Microbiology. 62: 3061-3065. PMID 8702302 DOI: 10.1128/Aem.62.8.3061-3065.1996  1
1996 Gilbert GS, Clayton MK, Handelsman J, Parke JL. Use of Cluster and Discriminant Analyses to Compare Rhizosphere Bacterial Communities Following Biological Perturbation Microbial Ecology. 32: 123-47. PMID 8688005 DOI: 10.1007/Bf00185884  0.52
1996 O'Connell KP, Goodman RM, Handelsman J. Engineering the rhizosphere: Expressing a bias Trends in Biotechnology. 14: 83-88. DOI: 10.1016/0167-7799(96)80928-0  1
1995 Milner JL, Raffel SJ, Lethbridge BJ, Handelsman J. Culture conditions that influence accumulation of zwittermicin A by Bacillus cereus UW85 Applied Microbiology and Biotechnology. 43: 685-691. PMID 7546606 DOI: 10.1007/Bf00164774  1
1995 Osburn RM, Milner JL, Oplinger ES, Smith RS, Handelsman J. Effect of Bacillus cereus UW85 on the yield of soybean at two field sites in Wisconsin. Plant Disease. 79: 551-556. DOI: 10.1094/Pd-79-0551  1
1994 Silo-Suh LA, Lethbridge BJ, Raffel SJ, He H, Clardy J, Handelsman J. Biological activities of two fungistatic antibiotics produced by Bacillus cereus UW85. Applied and Environmental Microbiology. 60: 2023-30. PMID 8031096 DOI: 10.1128/Aem.60.6.2023-2030.1994  1
1994 Stabb EV, Jacobson LM, Handelsman J. Zwittermicin A-producing strains of Bacillus cereus from diverse soils Applied and Environmental Microbiology. 60: 4404-4412. PMID 7811080 DOI: 10.1128/Aem.60.12.4404-4412.1994  1
1993 O'connell KP, Handelsman J. Foliar Chlorosis in Symbiotic Host and Nonhost Plants Induced by Rhizobium tropici Type B Strains. Applied and Environmental Microbiology. 59: 2184-9. PMID 16348994 DOI: 10.1128/Aem.59.7.2184-2189.1993  0.72
1993 Beattie GA, Handelsman J. Evaluation of a strategy for identifying nodulation competitiveness genes in Rhizobium leguminosarum biovar phaseoli Journal of General Microbiology. 139: 529-538. PMID 8473861 DOI: 10.1099/00221287-139-3-529  1
1993 Halverson LJ, Clayton MK, Handelsman J. Variable stability of antibiotic-resistance markers in Bacillus cereus UW85 in the soybean rhizosphere in the field. Molecular Ecology. 2: 65-78. PMID 8180735 DOI: 10.1111/J.1365-294X.1993.Tb00001.X  1
1993 Gilbert GS, Parke JL, Clayton MK, Handelsman J. Effects of an introduced bacterium on bacterial communities on roots Ecology. 74: 840-854. DOI: 10.2307/1940810  1
1992 Milner JL, Araujo RS, Handelsman J. Molecular and symbiotic characterization of exopolysaccharide-deficient mutants of Rhizobium tropici strain CIAT899 Molecular Microbiology. 6: 3137-3147. PMID 1453954 DOI: 10.1111/J.1365-2958.1992.Tb01770.X  1
1991 Halverson LJ, Handelsman J. Enhancement of soybean nodulation by Bacillus cereus UW85 in the field and in a growth chamber. Applied and Environmental Microbiology. 57: 2767-70. PMID 1768151  1
1991 Handelsman J, Nesmith WC, Raffel SJ. Microassay for biological and chemical control of infection of tobacco by Phytophthora parasitica var. nicotianae. Current Microbiology. 22: 317-319. DOI: 10.1007/Bf02091961  1
1990 Handelsman J, Raffel S, Mester EH, Wunderlich L, Grau CR. Biological Control of Damping-Off of Alfalfa Seedlings with Bacillus cereus UW85. Applied and Environmental Microbiology. 56: 713-8. PMID 16348145 DOI: 10.1128/Aem.56.3.713-718.1990  0.56
1990 O'Connell KP, Araujo RS, Handelsman J. Exopolysaccharide-deficient mutants of Rhizobium sp. strain CIAT899 induce chlorosis in common bean (Phaseolus vulgaris) Molecular Plant-Microbe Interactions. 3: 424-428. DOI: 10.1094/Mpmi-3-424  0.72
1990 Gilbert GS, Handelsman J, Parke JL. Role of ammonia and calcium in lysis of zoospores ofPhytophthora cactorum byBacillus cereus strain UW85 Experimental Mycology. 14: 1-8. DOI: 10.1016/0147-5975(90)90081-4  1
1990 Handelsman J, Raffel SJ, Sequeira L. Monoclonal antibodies against Agrobacterium tumefaciens strain C58 Current Microbiology. 21: 181-185. DOI: 10.1007/Bf02092119  1
1989 Beattie GA, Clayton MK, Handelsman J. Quantitative comparison of the laboratory and field competitiveness of Rhizobium leguminosarum biovar phaseoli Applied and Environmental Microbiology. 55: 2755-2761. PMID 2624457 DOI: 10.1128/Aem.55.11.2755-2761.1989  1
1989 O'Connell KP, Handelsman J. chvA locus may be involved in export of neutral cyclic beta-1,2-linked D-glucan from Agrobacterium tumefaciens. Molecular Plant-Microbe Interactions : Mpmi. 2: 11-6. PMID 2520158  0.72
1989 Beattie GA, Handelsman J. A rapid method for the isolation and identification of Rhizobium from root nodules Journal of Microbiological Methods. 9: 29-33. DOI: 10.1016/0167-7012(89)90027-4  1
1986 Ugalde RA, Handelsman J, Brill WJ. Role of galactosyltransferase activity in phage sensitivity and nodulation competitiveness of Rhizobium meliloti. Journal of Bacteriology. 166: 148-54. PMID 3082851 DOI: 10.1128/jb.166.1.148-154.1986  1
1985 Handelsman J, Brill WJ. Erwinia herbicola isolates from alfalfa plants may play a role in nodulation of alfalfa by Rhizobium meliloti. Applied and Environmental Microbiology. 49: 818-21. PMID 4004214 DOI: 10.1128/AEM.49.4.818-821.1985  1
1984 Handelsman J, Ugalde RA, Brill WJ. Rhizobium meliloti competitiveness and the alfalfa agglutinin. Journal of Bacteriology. 157: 703-7. PMID 6698937 DOI: 10.1128/JB.157.3.703-707.1984  1
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