Aram Mikaelyan - Related publications

Affiliations: 
Entomology and Plant Pathology North Carolina State University, Raleigh, NC 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Flynn PJ, D'Amelio CL, Sanders JG, Russell JA, Moreau CS. Localization of bacterial communities within gut compartments across turtle ants. Applied and Environmental Microbiology. PMID 33579688 DOI: 10.1128/AEM.02803-20   
2021 Xenophontos C, Taubert M, Harpole WS, Küsel K. Phylogenetic and metabolic diversity have contrasting effects on the ecological functioning of bacterial communities. Fems Microbiology Ecology. PMID 33587113 DOI: 10.1093/femsec/fiab017   
2021 Tang Y, Ma KY, Cheung MK, Yang CH, Wang Y, Hu X, Kwan HS, Chu KH. Gut Microbiota in Decapod Shrimps: Evidence of Phylosymbiosis. Microbial Ecology. PMID 33629169 DOI: 10.1007/s00248-021-01720-z   
2021 Blifernez-Klassen O, Klassen V, Wibberg D, Cebeci E, Henke C, Rückert C, Chaudhari S, Rupp O, Blom J, Winkler A, Al-Dilaimi A, Goesmann A, Sczyrba A, Kalinowski J, Bräutigam A, et al. Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia. Scientific Reports. 11: 1726. PMID 33462312 DOI: 10.1038/s41598-021-81082-1   
2021 Zhang XM, Tang DX, Li QQ, Wang YB, Xu ZH, Li WJ, Yu H. Complex microbial communities inhabiting natural Cordyceps militaris and the habitat soil and their predicted functions. Antonie Van Leeuwenhoek. PMID 33638738 DOI: 10.1007/s10482-021-01534-6   
2021 Cao M, Cui L, Sun H, Zhang X, Zheng X, Jiang J. Effects of Invasion on Soil Microbial Community Structure and Ecological Functions. Microorganisms. 9. PMID 33435501 DOI: 10.3390/microorganisms9010138   
2021 Fontaine SS, Mineo PM, Kohl KD. Changes in the gut microbial community of the eastern newt (Notophthalmus viridescens) across its three distinct life stages. Fems Microbiology Ecology. PMID 33547890 DOI: 10.1093/femsec/fiab021   
2021 Abe K, Hirayama M, Ohno K, Shimamura T. Hierarchical non-negative matrix factorization using clinical information for microbial communities. Bmc Genomics. 22: 104. PMID 33541264 DOI: 10.1186/s12864-021-07401-y   
2021 Fracchia F, Mangeot-Peter L, Jacquot L, Martin F, Veneault-Fourrey C, Deveau A. Colonization of naïve roots from involves successive waves of fungi and bacteria with different trophic abilities. Applied and Environmental Microbiology. PMID 33452025 DOI: 10.1128/AEM.02541-20   
2021 Shu D, Guo Y, Zhang B, Zhang C, Van Nostrand JD, Lin Y, Zhou J, Wei G. Rare prokaryotic sub-communities dominate the complexity of ecological networks and soil multinutrient cycling during long-term secondary succession in China's Loess Plateau. The Science of the Total Environment. 774: 145737. PMID 33611012 DOI: 10.1016/j.scitotenv.2021.145737   
2021 Song W, Wemheuer B, Steinberg PD, Marzinelli EM, Thomas T. Contribution of horizontal gene transfer to the functionality of microbial biofilm on a macroalgae. The Isme Journal. PMID 33558686 DOI: 10.1038/s41396-020-00815-8   
2021 David GM, López-García P, Moreira D, Alric B, Deschamps P, Bertolino P, Restoux G, Rochelle-Newall E, Thébault E, Simon M, Jardillier L. Small freshwater ecosystems with dissimilar microbial communities exhibit similar temporal patterns. Molecular Ecology. PMID 33639035 DOI: 10.1111/mec.15864   
2021 Khalid S, Keller NP. Chemical Signals Driving Bacterial-Fungal Interactions. Environmental Microbiology. PMID 33511714 DOI: 10.1111/1462-2920.15410   
2021 Qin M, Chen J, Xu S, Jiang L, Qiao G. Microbiota associated with Mollitrichosiphum aphids (Hemiptera: Aphididae: Greenideinae): diversity, host species specificity and phylosymbiosis. Environmental Microbiology. PMID 33415800 DOI: 10.1111/1462-2920.15391   
2021 Lu Z, Liu Z, Zhang C, Wei Q, Zhang S, Li M. Spatial and seasonal variations of sediment bacterial communities in a river-bay system in South China. Applied Microbiology and Biotechnology. PMID 33544213 DOI: 10.1007/s00253-021-11142-z   
2021 Gomez JA, Primm TP. A Slimy Business: the Future of Fish Skin Microbiome Studies. Microbial Ecology. PMID 33410931 DOI: 10.1007/s00248-020-01648-w   
2021 Gwak HJ, Lee SJ, Rho M. Application of computational approaches to analyze metagenomic data. Journal of Microbiology (Seoul, Korea). PMID 33565054 DOI: 10.1007/s12275-021-0632-8   
2021 Karkaria BD, Fedorec AJH, Barnes CP. Automated design of synthetic microbial communities. Nature Communications. 12: 672. PMID 33510148 DOI: 10.1038/s41467-020-20756-2   
2021 Muturi EJ, Njoroge TM, Dunlap C, Cáceres CE. Blood meal source and mixed blood-feeding influence gut bacterial community composition in Aedes aegypti. Parasites & Vectors. 14: 83. PMID 33509255 DOI: 10.1186/s13071-021-04579-8   
2021 Patin NV, Dietrich ZA, Stancil A, Quinan M, Beckler JS, Hall ER, Culter J, Smith CG, Taillefert M, Stewart FJ. Gulf of Mexico blue hole harbors high levels of novel microbial lineages. The Isme Journal. PMID 33612832 DOI: 10.1038/s41396-021-00917-x   
2021 You HS, Lee SH, Lee YJ, Sung HJ, Kang HG, Hyun SH. Microbial analyses of blood spot surfaces collected from a laboratory and the bathroom of a female single-person household under different environmental conditions. Fems Microbiology Letters. PMID 33620469 DOI: 10.1093/femsle/fnab023   
2021 Li Y, Hu C. Biogeographical patterns and mechanisms of microbial community assembly that underlie successional biocrusts across northern China. Npj Biofilms and Microbiomes. 7: 15. PMID 33547284 DOI: 10.1038/s41522-021-00188-6   
2021 He Q, Wang S, Hou W, Feng K, Li F, Hai W, Zhang Y, Sun Y, Deng Y. Temperature and microbial interactions drive the deterministic assembly processes in sediments of hot springs. The Science of the Total Environment. 772: 145465. PMID 33571767 DOI: 10.1016/j.scitotenv.2021.145465   
2021 Stewart JD, Ontai A, Yusoof K, Ramirez KS, Bilinski T. Functional redundancy in local spatial scale microbial communities suggest stochastic processes at an urban wilderness preserve in Austin, TX, USA. Fems Microbiology Letters. PMID 33507263 DOI: 10.1093/femsle/fnab010   
2021 Su C, Shinkai T, Miyazawa N, Mitsumori M, Enishi O, Nagashima K, Koike S, Kobayashi Y. Microbial community structure of the bovine rumen as affected by feeding cashew nut shell liquid, a methane-inhibiting and propionate-enhancing agent. Animal Science Journal = Nihon Chikusan Gakkaiho. 92: e13503. PMID 33398898 DOI: 10.1111/asj.13503   
2021 Taş N, de Jong AE, Li Y, Trubl G, Xue Y, Dove NC. Metagenomic tools in microbial ecology research. Current Opinion in Biotechnology. 67: 184-191. PMID 33592536 DOI: 10.1016/j.copbio.2021.01.019   
2021 Sulaiman I, Wu BG, Li Y, Tsay JC, Sauthoff M, Scott AS, Ji K, Koralov SB, Weiden M, Clemente J, Jones D, Huang YJ, Stringer KA, Zhang L, Geber A, et al. Functional lower airways genomic profiling of the microbiome to capture active microbial metabolism. The European Respiratory Journal. PMID 33446604 DOI: 10.1183/13993003.03434-2020   
2021 Chica Cardenas LA, Clavijo V, Vives M, Reyes A. Bacterial meta-analysis of chicken cecal microbiota. Peerj. 9: e10571. PMID 33505795 DOI: 10.7717/peerj.10571   
2021 Zhang W, Bahadur A, Sajjad W, Zhang G, Nasir F, Zhang B, Wu X, Liu G, Chen T. Bacterial Diversity and Community Composition Distribution in Cold-Desert Habitats of Qinghai-Tibet Plateau, China. Microorganisms. 9. PMID 33514038 DOI: 10.3390/microorganisms9020262   
2021 Duncan K, Carey-Ewend K, Vaishnava S. Spatial analysis of gut microbiome reveals a distinct ecological niche associated with the mucus layer. Gut Microbes. 1-21. PMID 33567985 DOI: 10.1080/19490976.2021.1874815   
2021 Zaramela LS, Moyne O, Kumar M, Zuniga C, Tibocha-Bonilla JD, Zengler K. The sum is greater than the parts: exploiting microbial communities to achieve complex functions. Current Opinion in Biotechnology. 67: 149-157. PMID 33561703 DOI: 10.1016/j.copbio.2021.01.013   
2021 Wang J, Wang Y, Li M, Xu L, He N, Yan P, Chen C, Lu Q, Feng Y, Li J. Differential response of abundant and rare bacterial subcommunities to abiotic and biotic gradients across temperate deserts. The Science of the Total Environment. 763: 142942. PMID 33498119 DOI: 10.1016/j.scitotenv.2020.142942   
2021 Malakar D, Sarathbabu S, Borah P, Kumar NS. Fish gill microbiome from India's largest Brahmaputra River-a trans-border biodiversity hotspot region. Environmental Monitoring and Assessment. 193: 56. PMID 33432373 DOI: 10.1007/s10661-021-08847-z   
2021 Hutchinson MI, Bell TAS, Gallegos-Graves V, Dunbar J, Albright M. Merging Fungal and Bacterial Community Profiles via an Internal Control. Microbial Ecology. PMID 33410932 DOI: 10.1007/s00248-020-01638-y   
2021 Venkatakrishnan A, Holzknecht ZE, Holzknecht R, Bowles DE, Kotzé SH, Modliszewski JL, Parker W. Evolution of bacteria in the human gut in response to changing environments: An invisible player in the game of health. Computational and Structural Biotechnology Journal. 19: 752-758. PMID 33552447 DOI: 10.1016/j.csbj.2021.01.007   
2021 Stephens CRA, McAmmond BM, Van Hamme JD, Otter KA, Reudink MW, Bottos EM. Analysis of Mountain Chickadee () associated bacterial communities across urban and rural habitats. Canadian Journal of Microbiology. PMID 33656947 DOI: 10.1139/cjm-2020-0320   
2021 Joseph TA, Pe'er I. An Introduction to Whole-Metagenome Shotgun Sequencing Studies. Methods in Molecular Biology (Clifton, N.J.). 2243: 107-122. PMID 33606255 DOI: 10.1007/978-1-0716-1103-6_6   
2021 Joseph TA, Pe'er I. An Introduction to Whole-Metagenome Shotgun Sequencing Studies. Methods in Molecular Biology (Clifton, N.J.). 2243: 107-122. PMID 33606255 DOI: 10.1007/978-1-0716-1103-6_6   
2021 Hongxia M, Jingfeng F, Jiwen L, Su Jie, Zhiyi W, Yantao W, Dongwei L, Mengfei L, Tingting S, Yuan J, Huiling H, Jixue S. Full-length 16S rRNA gene sequencing reveals spatiotemporal dynamics of bacterial community in a heavily polluted estuary, China. Environmental Pollution (Barking, Essex : 1987). 275: 116567. PMID 33578312 DOI: 10.1016/j.envpol.2021.116567   
2021 Wang Y, Yan Y, Thompson KN, Bae S, Accorsi EK, Zhang Y, Shen J, Vlamakis H, Hartmann EM, Huttenhower C. Whole microbial community viability is not quantitatively reflected by propidium monoazide sequencing approach. Microbiome. 9: 17. PMID 33478576 DOI: 10.1186/s40168-020-00961-3   
2021 Xiong X, Xing Y, He J, Wang L, Shen Z, Chen W, Huang Q. Keystone species determine the "selection mechanism" of multispecies biofilms for bacteria from soil aggregates. The Science of the Total Environment. 773: 145069. PMID 33592465 DOI: 10.1016/j.scitotenv.2021.145069   
2021 Sadiq FA, Burmølle M, Heyndrickx M, Flint S, Lu W, Chen W, Zhao J, Zhang H. Community-wide changes reflecting bacterial interspecific interactions in multispecies biofilms. Critical Reviews in Microbiology. 1-21. PMID 33651958 DOI: 10.1080/1040841X.2021.1887079   
2021 Loomis KH, Wu SK, Ernlund A, Zudock K, Reno A, Blount K, Karig DK. A mixed community of skin microbiome representatives influences cutaneous processes more than individual members. Microbiome. 9: 22. PMID 33482907 DOI: 10.1186/s40168-020-00963-1   
2021 Carpenter CM, Frank DN, Williamson K, Arbet J, Wagner BD, Kechris K, Kroehl ME. tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R. Bmc Bioinformatics. 22: 41. PMID 33526006 DOI: 10.1186/s12859-021-03967-2   
2021 Colin Y, Berthe T, Molbert N, Guigon E, Vivant AL, Alliot F, Collin S, Goutte A, Petit F. Urbanization Constrains Skin Bacterial Phylogenetic Diversity in Wild Fish Populations and Correlates with the Proliferation of Aeromonads. Microbial Ecology. PMID 33415385 DOI: 10.1007/s00248-020-01650-2   
2021 Zhang L, Ma B, Tang C, Yu H, Lv X, Mazza Rodrigues JL, Dahlgren RA, Xu J. Habitat heterogeneity induced by pyrogenic organic matter in wildfire-perturbed soils mediates bacterial community assembly processes. The Isme Journal. PMID 33514880 DOI: 10.1038/s41396-021-00896-z   
2021 Wyness AJ, Fortune I, Blight AJ, Browne P, Hartley M, Holden M, Paterson DM. Ecosystem engineers drive differing microbial community composition in intertidal estuarine sediments. Plos One. 16: e0240952. PMID 33606695 DOI: 10.1371/journal.pone.0240952   
2021 Pecundo MH, Chang ACG, Chen T, Dela Cruz TEE, Ren H, Li N. Full-Length 16S rRNA and Gene Sequencing Revealed Rich Microbial Flora in Roots of spp. in China. Evolutionary Bioinformatics Online. 17: 1176934321989713. PMID 33613025 DOI: 10.1177/1176934321989713   
2021 Neu AT, Hughes IV, Allen EE, Roy K. Decade-scale stability and change in a marine bivalve microbiome. Molecular Ecology. PMID 33432685 DOI: 10.1111/mec.15796   
2021 de Sousa Lopes L, Mendes LW, Antunes JEL, de Souza Oliveira LM, Melo VMM, de Araujo Pereira AP, da Costa AF, de Paula Oliveira J, Martínez CR, Figueiredo MDVB, Araujo ASF. Distinct bacterial community structure and composition along different cowpea producing ecoregions in Northeastern Brazil. Scientific Reports. 11: 831. PMID 33437021 DOI: 10.1038/s41598-020-80840-x