Juliana Cortines - Related publications

Affiliations: 
University of Alabama, Birmingham, Birmingham, AL, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Schlicksup CJ, Zlotnick A. Viral structural proteins as targets for antivirals. Current Opinion in Virology. 45: 43-50. PMID 32777753 DOI: 10.1016/j.coviro.2020.07.001   
2020 Badal VD, Kundrotas PJ, Vakser IA. Text mining for modeling of protein complexes enhanced by machine learning. Bioinformatics (Oxford, England). PMID 32960948 DOI: 10.1093/bioinformatics/btaa823   
2020 Stollar EJ, Smith DP. Uncovering protein structure. Essays in Biochemistry. PMID 32975287 DOI: 10.1042/EBC20190042   
2020 Curnow P, Hardy BJ, Dufour V, Arthur CJ, Stenner R, Hodgson LR, Verkade P, Williams C, Shoemark DK, Sessions RB, Crump MP, Jones MR, Anderson JLR. Small-residue packing motifs modulate the structure and function of a minimal de novo membrane protein. Scientific Reports. 10: 15203. PMID 32938984 DOI: 10.1038/s41598-020-71585-8   
2020 Arooj M, Shehadi I, Nassab CN, Mohamed AA. Physicochemical stability study of protein-benzoic acid complexes using molecular dynamics simulations. Amino Acids. 52: 1353-1362. PMID 33006112 DOI: 10.1007/s00726-020-02897-2   
2020 Agostino M. Comprehensive analysis of carbohydrate-protein recognition in the Protein Data Bank. Carbohydrate Research. 498: 108180. PMID 33096507 DOI: 10.1016/j.carres.2020.108180   
2020 Di Costanzo L, Geremia S. Atomic Details of Carbon-Based Nanomolecules Interacting with Proteins. Molecules (Basel, Switzerland). 25. PMID 32759758 DOI: 10.3390/molecules25153555   
2020 Han S, Kim YN, Jo G, Kim YE, Kim HM, Choi JM, Jung Y. Multivalent Interaction-Driven Assembly of Discrete, Flexible, and Asymmetric Supramolecular Protein Nano-Prisms. Angewandte Chemie (International Ed. in English). PMID 32856385 DOI: 10.1002/anie.202010054   
2020 Bowman MA, Riback JA, Rodriguez A, Guo H, Li J, Sosnick TR, Clark PL. Properties of protein unfolded states suggest broad selection for expanded conformational ensembles. Proceedings of the National Academy of Sciences of the United States of America. PMID 32879005 DOI: 10.1073/pnas.2003773117   
2020 Tse C, Wickstrom L, Kvaratskhelia M, Gallicchio E, Levy R, Deng N. Exploring the Free-Energy Landscape and Thermodynamics of Protein-Protein Association. Biophysical Journal. PMID 32877664 DOI: 10.1016/j.bpj.2020.08.005   
2020 Aarum J, Cabrera CP, Jones TA, Rajendran S, Adiutori R, Giovannoni G, Barnes MR, Malaspina A, Sheer D. Enzymatic degradation of RNA causes widespread protein aggregation in cell and tissue lysates. Embo Reports. e49585. PMID 32945072 DOI: 10.15252/embr.201949585   
2020 Duan Z, Han Y, Zhou L, Yuan C, Wang Y, Zhao C, Tang H, Chen J. Chicken bromodomain-containing protein 2 interacts with the Newcastle disease virus matrix protein and promotes viral replication. Veterinary Research. 51: 120. PMID 32962745 DOI: 10.1186/s13567-020-00846-1   
2020 Düppre E, Schneider D. The J- and G/F-domains of the major Synechocystis DnaJ protein Sll0897 are sufficient for cell viability but not for heat resistance. Febs Open Bio. PMID 32965069 DOI: 10.1002/2211-5463.12980   
2020 Ferdous N, Reza MN, Emon MTH, Islam MS, Mohiuddin AKM, Hossain MU. Molecular characterization and functional annotation of a hypothetical protein (SCO0618) of Streptomyces coelicolor A3(2). Genomics & Informatics. 18: e28. PMID 33017872 DOI: 10.5808/GI.2020.18.3.e28   
2020 Ferdous N, Reza MN, Emon MTH, Islam MS, Mohiuddin AKM, Hossain MU. Molecular characterization and functional annotation of a hypothetical protein (SCO0618) of Streptomyces coelicolor A3(2). Genomics & Informatics. 18: e28. PMID 33017872 DOI: 10.5808/GI.2020.18.3.e28   
2020 Kocyła A, Tran JB, Krężel A. Galvanization of Protein-Protein Interactions in a Dynamic Zinc Interactome. Trends in Biochemical Sciences. PMID 32958327 DOI: 10.1016/j.tibs.2020.08.011   
2020 Shin G, Lim SI. Site-specific proximity ligation provides molecular insights into biologically relevant interfaces of protein-protein interaction. Biochemical and Biophysical Research Communications. PMID 33008597 DOI: 10.1016/j.bbrc.2020.09.097   
2020 Shin G, Lim SI. Site-specific proximity ligation provides molecular insights into biologically relevant interfaces of protein-protein interaction. Biochemical and Biophysical Research Communications. PMID 33008597 DOI: 10.1016/j.bbrc.2020.09.097   
2020 Miyamae Y, Chen LC, Utsugi Y, Farrants H, Wandless TJ. A Method for Conditional Regulation of Protein Stability in Native or Near-Native Form. Cell Chemical Biology. PMID 33007216 DOI: 10.1016/j.chembiol.2020.09.004   
2020 Banyuls N, Quan Y, González-Martínez RM, Hernández-Martínez P, Ferré J. Effect of substitutions of key residues on the stability and the insecticidal activity of Vip3Af from Bacillus thuringiensis. Journal of Invertebrate Pathology. 107439. PMID 32663546 DOI: 10.1016/j.jip.2020.107439   
2020 Banyuls N, Quan Y, González-Martínez RM, Hernández-Martínez P, Ferré J. Effect of substitutions of key residues on the stability and the insecticidal activity of Vip3Af from Bacillus thuringiensis. Journal of Invertebrate Pathology. 107439. PMID 32663546 DOI: 10.1016/j.jip.2020.107439   
2020 Ren H. Genetically encoded selective cross-linkers and emerging applications. Biochemical Society Transactions. 48: 1807-1817. PMID 32657352 DOI: 10.1042/BST20200508   
2020 Li Y, Qiao B, Olvera de la Cruz M. Protein Surface Printer for Exploring Protein Domains. Journal of Chemical Information and Modeling. PMID 32846088 DOI: 10.1021/acs.jcim.0c00582   
2020 Kihara S, Ghosh S, McDougall DR, Whitten AE, Mata JP, Köper I, McGillivray DJ. Structure of soft and hard protein corona around polystyrene nanoplastics-Particle size and protein types. Biointerphases. 15: 051002. PMID 32948094 DOI: 10.1116/6.0000404   
2020 Sheng J, Olrichs NK, Gadella BM, Kaloyanova DV, Helms JB. Regulation of Functional Protein Aggregation by Multiple Factors: Implications for the Amyloidogenic Behavior of the CAP Superfamily Proteins. International Journal of Molecular Sciences. 21. PMID 32906672 DOI: 10.3390/ijms21186530   
2020 Banerjee S. Effect of glyoxal and 1-methylisatin on stress-induced fibrillation of Hen Egg White Lysozyme: Insight into the anti-amyloidogenic property of the compounds with possible therapeutic implications. International Journal of Biological Macromolecules. PMID 33065156 DOI: 10.1016/j.ijbiomac.2020.10.017   
2020 Singh A, Thakur M, Singh SK, Sharma LK, Chandra K. Exploring the effect of nsSNPs in human YPEL3 gene in cellular senescence. Scientific Reports. 10: 15301. PMID 32943700 DOI: 10.1038/s41598-020-72333-8   
2020 Ma Y, Lee CJ, Park JS. Strategies for Optimizing the Production of Proteins and Peptides with Multiple Disulfide Bonds. Antibiotics (Basel, Switzerland). 9. PMID 32858882 DOI: 10.3390/antibiotics9090541   
2020 Nash MA. Single-molecule and Single-cell Approaches in Molecular Bioengineering. Chimia. 74: 704-709. PMID 32958108 DOI: 10.2533/chimia.2020.704   
2020 Mebratu YA, Negasi ZH, Dutta S, Rojas-Quintero J, Tesfaigzi Y. Adaptation of Proteasomes and Lysosomes to Cellular Environments. Cells. 9. PMID 33019542 DOI: 10.3390/cells9102221   
2020 Kumar A, Dubey R, Singhai S, Konar AD, Basu A. Structural Characterization with Light Scattering: A Tool for Rationally designing Protein Formulations. Analytical Biochemistry. 113979. PMID 33035463 DOI: 10.1016/j.ab.2020.113979   
2020 Wu S, Tian C, Liu P, Guo D, Zheng W, Huang X, Zhang Y, Liu L. Effects of SARS-CoV-2 mutations on protein structures and intraviral protein-protein interactions. Journal of Medical Virology. PMID 33090512 DOI: 10.1002/jmv.26597   
2020 Wu S, Tian C, Liu P, Guo D, Zheng W, Huang X, Zhang Y, Liu L. Effects of SARS-CoV-2 mutations on protein structures and intraviral protein-protein interactions. Journal of Medical Virology. PMID 33090512 DOI: 10.1002/jmv.26597   
2020 Lipsh-Sokolik R, Listov D, Fleishman SJ. The AbDesign computational pipeline for modular backbone assembly and design of binders and enzymes. Protein Science : a Publication of the Protein Society. PMID 33040418 DOI: 10.1002/pro.3970   
2020 Hossain MS, Roy AS, Islam MS. In silico analysis predicting effects of deleterious SNPs of human RASSF5 gene on its structure and functions. Scientific Reports. 10: 14542. PMID 32884013 DOI: 10.1038/s41598-020-71457-1   
2020 Zhao V, Jacobs WM, Shakhnovich EI. Effect of Protein Structure on Evolution of Cotranslational Folding. Biophysical Journal. PMID 32857962 DOI: 10.1016/j.bpj.2020.06.037   
2020 Li Y, Golding GB, Ilie L. DELPHI: accurate deep ensemble model for protein interaction sites prediction. Bioinformatics (Oxford, England). PMID 32840562 DOI: 10.1093/bioinformatics/btaa750   
2020 Giri SJ, Dutta P, Halani P, Saha S. MultiPredGO: Deep Multi-Modal Protein Function Prediction by Amalgamating Protein Structure, Sequence, and Interaction. Ieee Journal of Biomedical and Health Informatics. PMID 32897865 DOI: 10.1109/JBHI.2020.3022806   
2020 Ding Y, Ball KA, Webb KJ, Gao Y, D'Alessandro A, Old WM, Stowell MHB, Ding X. On-Chip Acousto Thermal Shift Assay for Rapid and Sensitive Assessment of Protein Thermodynamic Stability. Small (Weinheim An Der Bergstrasse, Germany). e2003506. PMID 32893496 DOI: 10.1002/smll.202003506   
2020 Rogers AM, Egan MJ. Autophagy machinery promotes the chaperone-mediated formation and compartmentalization of protein aggregates during appressorium development by the rice blast fungus. Molecular Biology of the Cell. mbcE20010068. PMID 32816646 DOI: 10.1091/mbc.E20-01-0068   
2020 Mirela-Bota P, Aguirre-Plans J, Meseguer A, Galletti C, Segura J, Planas-Iglesias J, Garcia-Garcia J, Guney E, Oliva B, Fernandez-Fuentes N. Galaxy InteractoMIX: An Integrated Computational Platform for the Study of Protein-Protein Interaction Data. Journal of Molecular Biology. PMID 32976910 DOI: 10.1016/j.jmb.2020.09.015   
2020 Tran-Nguyen TS, Ngo-Luong DT, Nguyen-Phuoc KH, Tran TL, Tran-Van H. Simultaneously targeting nitrocellulose and antibody by a dual-headed protein. Protein Expression and Purification. 177: 105764. PMID 32971296 DOI: 10.1016/j.pep.2020.105764   
2020 Hu JJ, He PY, Li YM. Chemical modifications of tryptophan residues in peptides and proteins. Journal of Peptide Science : An Official Publication of the European Peptide Society. e3286. PMID 32945039 DOI: 10.1002/psc.3286   
2020 Ahmadi MKB, Mohammadi SA, Makvandi M, Mamouei M, Rahmati M, Dehghani H, Wood DW. Recent advances in the scaffold engineering of protein binders. Current Pharmaceutical Biotechnology. PMID 32838715 DOI: 10.2174/1389201021999200824101035   
2020 Will JM, Erbacher C, Sperling M, Karst U. A mass spectrometry-based approach gives new insight into organotin-protein interactions. Metallomics : Integrated Biometal Science. PMID 32930317 DOI: 10.1039/d0mt00171f   
2020 Guo C, Steinberg LK, Henderson JP, Gross ML. Organic Solvents for Enhanced Proteolysis of Stable Proteins for Hydrogen-Deuterium Exchange Mass Spectrometry. Analytical Chemistry. 92: 11553-11557. PMID 32867496 DOI: 10.1021/acs.analchem.0c02194   
2020 Banerjee A, Mitra P. Ebola Virus VP35 protein: modeling of the tetrameric structure and an analysis of its interaction with Human PKR. Journal of Proteome Research. PMID 32871072 DOI: 10.1021/acs.jproteome.0c00473   
2020 Wang W, Azizyan R, Garro A, Kajava AV, Ventura S. Multifunctional amyloid oligomeric nanoparticles for specific cell targeting and drug delivery. Biomacromolecules. PMID 32885960 DOI: 10.1021/acs.biomac.0c01103   
2020 Hussain M, Jabeen N, Shabbir S, Udin N, Aziz B, Amanullah A, Raza F, Baig AA. Dataset for homologous proteins in for SARS-CoV-2/human interactome. Data in Brief. 32: 106082. PMID 32775582 DOI: 10.1016/j.dib.2020.106082   
2020 Honda Y, Nomoto T, Matsui M, Takemoto H, Kaihara Y, Miura Y, Nishiyama N. Sequential Self-Assembly Using Tannic Acid and Phenylboronic Acid-Modified Copolymers for Potential Protein Delivery. Biomacromolecules. PMID 32786730 DOI: 10.1021/acs.biomac.0c00903