| Year |
Citation |
Score |
| 2020 |
Hossain S, Joyce P, Parrow A, Jõemetsa S, Höök F, Larsson P, Bergström CAS. Influence of bile composition on membrane incorporation of transient permeability enhancers. Molecular Pharmaceutics. PMID 32960068 DOI: 10.1021/Acs.Molpharmaceut.0C00668 |
0.311 |
|
| 2020 |
Larsson P, Kneiszl RC, Marklund EG. MkVsites: A tool for creating GROMACS virtual sites parameters to increase performance in all-atom molecular dynamics simulations. Journal of Computational Chemistry. 41: 1564-1569. PMID 32282082 DOI: 10.1002/Jcc.26198 |
0.303 |
|
| 2018 |
Bergström CAS, Larsson P. Computational prediction of drug solubility in water-based systems: qualitative and quantitative approaches used in the current drug discovery and development setting. International Journal of Pharmaceutics. PMID 29421301 DOI: 10.1016/J.Ijpharm.2018.01.044 |
0.313 |
|
| 2017 |
Larsson P, Alskär L, Bergström CAS. Molecular structuring and phase transition of lipid-based formulations upon water dispersion: a coarse-grained molecular dynamics simulation approach. Molecular Pharmaceutics. PMID 28799773 DOI: 10.1021/Acs.Molpharmaceut.7B00397 |
0.327 |
|
| 2016 |
Holmboe M, Larsson P, Anwar J, Bergström CA. Partitioning into Colloidal Structures of Fasted State Intestinal Fluid Studied by Molecular Dynamics Simulations. Langmuir : the Acs Journal of Surfaces and Colloids. 32: 12732-12740. PMID 27934534 DOI: 10.1021/Acs.Langmuir.6B03008 |
0.323 |
|
| 2014 |
Larsson P, Kasson PM. Lipid converter, a framework for lipid manipulations in molecular dynamics simulations. The Journal of Membrane Biology. 247: 1137-40. PMID 25081234 DOI: 10.1007/S00232-014-9705-5 |
0.581 |
|
| 2014 |
Fox DA, Larsson P, Lo RH, Kroncke BM, Kasson PM, Columbus L. Structure of the Neisserial outer membrane protein Opa₆₀: loop flexibility essential to receptor recognition and bacterial engulfment. Journal of the American Chemical Society. 136: 9938-46. PMID 24813921 DOI: 10.1021/Ja503093Y |
0.59 |
|
| 2014 |
Gregory SM, Larsson P, Nelson EA, Kasson PM, White JM, Tamm LK. Ebolavirus entry requires a compact hydrophobic fist at the tip of the fusion loop. Journal of Virology. 88: 6636-49. PMID 24696482 DOI: 10.1128/Jvi.00396-14 |
0.581 |
|
| 2014 |
Columbus L, Fox D, Larsson P, Lo R, Kroncke B, Kasson P. Solution Structure Of Opa60 From N. Gonorrhoeae Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Maf/Pdb |
0.527 |
|
| 2014 |
Larsson P, Kasson PM. Membrane Fusion Peptide-Membrane Interactions: Comparing Simulations to Experimental Depth Measurements Biophysical Journal. 106: 89a. DOI: 10.1016/J.Bpj.2013.11.563 |
0.599 |
|
| 2014 |
Larsson P, Pouya I, Lindahl E. From Side Chains Rattling on Picoseconds to Ensemble Simulations of Protein Folding Israel Journal of Chemistry. 54: 1274-1285. DOI: 10.1002/Ijch.201400020 |
0.322 |
|
| 2013 |
Larsson P, Kasson PM. Lipid tail protrusion in simulations predicts fusogenic activity of influenza fusion peptide mutants and conformational models. Plos Computational Biology. 9: e1002950. PMID 23505359 DOI: 10.1371/Journal.Pcbi.1002950 |
0.598 |
|
| 2013 |
Pronk S, Páll S, Schulz R, Larsson P, Bjelkmar P, Apostolov R, Shirts MR, Smith JC, Kasson PM, van der Spoel D, Hess B, Lindahl E. GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit. Bioinformatics (Oxford, England). 29: 845-54. PMID 23407358 DOI: 10.1093/Bioinformatics/Btt055 |
0.59 |
|
| 2013 |
Larsson P, Kasson PM. Lipid Tail Protrusion could Explain Fusogenic Activity in Influenza Hemaggluttinin Biophysical Journal. 104: 87a. DOI: 10.1016/J.Bpj.2012.11.522 |
0.59 |
|
| 2011 |
Larsson P, Skwark MJ, Wallner B, Elofsson A. Improved predictions by Pcons.net using multiple templates. Bioinformatics (Oxford, England). 27: 426-7. PMID 21149277 DOI: 10.1093/Bioinformatics/Btq664 |
0.718 |
|
| 2011 |
Pronk S, Larsson P, Pouya I, Bowman GR, Haque IS, Beauchamp K, Hess B, Pande VS, Kasson PM, Lindahl E. Copernicus: A new paradigm for parallel adaptive molecular dynamics Proceedings of 2011 Sc - International Conference For High Performance Computing, Networking, Storage and Analysis. DOI: 10.1145/2063384.2063465 |
0.588 |
|
| 2011 |
Larsson P, Hess B, Lindahl E. Algorithm improvements for molecular dynamics simulations Wiley Interdisciplinary Reviews: Computational Molecular Science. 1: 93-108. DOI: 10.1002/Wcms.3 |
0.305 |
|
| 2010 |
Bjelkmar P, Larsson P, Cuendet MA, Hess B, Lindahl E. Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models. Journal of Chemical Theory and Computation. 6: 459-66. PMID 26617301 DOI: 10.1021/Ct900549R |
0.328 |
|
| 2010 |
Larsson P, Lindahl E. A high-performance parallel-generalized Born implementation enabled by tabulated interaction rescaling. Journal of Computational Chemistry. 31: 2593-600. PMID 20740558 DOI: 10.1002/Jcc.21552 |
0.334 |
|
| 2009 |
Larsson P, Skwark MJ, Wallner B, Elofsson A. Assessment of global and local model quality in CASP8 using Pcons and ProQ. Proteins. 77: 167-72. PMID 19544566 DOI: 10.1002/Prot.22476 |
0.71 |
|
| 2008 |
Larsson P, Wallner B, Lindahl E, Elofsson A. Using multiple templates to improve quality of homology models in automated homology modeling. Protein Science : a Publication of the Protein Society. 17: 990-1002. PMID 18441233 DOI: 10.1110/Ps.073344908 |
0.672 |
|
| 2007 |
Wallner B, Larsson P, Elofsson A. Pcons.net: protein structure prediction meta server. Nucleic Acids Research. 35: W369-74. PMID 17584798 DOI: 10.1093/Nar/Gkm319 |
0.663 |
|
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