David S. Shin - Publications

Affiliations: 
Scripps Research Institute, La Jolla, La Jolla, CA, United States 

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Tsutakawa SE, Sarker AH, Ng C, Arvai AS, Shin DS, Shih B, Jiang S, Thwin AC, Tsai MS, Willcox A, Her MZ, Trego KS, Raetz AG, Rosenberg D, Bacolla A, et al. Human XPG nuclease structure, assembly, and activities with insights for neurodegeneration and cancer from pathogenic mutations. Proceedings of the National Academy of Sciences of the United States of America. PMID 32522879 DOI: 10.1073/Pnas.1921311117  0.735
2018 Tang HYH, Shin DS, Hura GL, Yang Y, Hu X, Lightstone FC, McGee MD, Padgett HS, Yannone SM, Tainer JA. Structural control of nonnative ligand binding in engineered mutants of phosphoenolpyruvate carboxykinase. Biochemistry. PMID 30376300 DOI: 10.1021/Acs.Biochem.8B00963  0.534
2017 Tang HYH, Hura GL, Shin DS, Yannone SM, Tainer JA. Effects of engineering non-native ligand binding into E. coli phosphoenolpyruvate carboxykinase Acta Crystallographica Section a Foundations and Advances. 73: a207-a207. DOI: 10.1107/S0108767317097963  0.445
2015 Shin DS, Tainer JA. Molecular biology: DNA repair without flipping out. Nature. PMID 26524524 DOI: 10.1038/Nature15646  0.579
2015 Pratt AJ, DiDonato M, Shin DS, Cabelli DE, Bruns CK, Belzer CA, Gorringe AR, Langford PR, Tabatabai LB, Kroll JS, Tainer JA, Getzoff ED. Structural, functional and immunogenic insights on Cu,Zn Superoxide Dismutase pathogenic virulence factors from Neisseria meningitidis and Brucella abortus. Journal of Bacteriology. PMID 26459556 DOI: 10.1128/Jb.00343-15  0.545
2014 Pratt AJ, Shin DS, Merz GE, Rambo RP, Lancaster WA, Dyer KN, Borbat PP, Poole FL, Adams MW, Freed JH, Crane BR, Tainer JA, Getzoff ED. Aggregation propensities of superoxide dismutase G93 hotspot mutants mirror ALS clinical phenotypes. Proceedings of the National Academy of Sciences of the United States of America. 111: E4568-76. PMID 25316790 DOI: 10.1073/Pnas.1308531111  0.522
2014 Shin DS, Pratt AJ, Tainer JA. Archaeal genome guardians give insights into eukaryotic DNA replication and damage response proteins. Archaea (Vancouver, B.C.). 2014: 206735. PMID 24701133 DOI: 10.1155/2014/206735  0.553
2013 Tsutakawa SE, Shin DS, Mol CD, Izumi T, Arvai AS, Mantha AK, Szczesny B, Ivanov IN, Hosfield DJ, Maiti B, Pique ME, Frankel KA, Hitomi K, Cunningham RP, Mitra S, et al. Conserved structural chemistry for incision activity in structurally non-homologous apurinic/apyrimidinic endonuclease APE1 and endonuclease IV DNA repair enzymes. The Journal of Biological Chemistry. 288: 8445-55. PMID 23355472 DOI: 10.1074/Jbc.M112.422774  0.681
2011 Hartung S, Arvai AS, Wood T, Kolappan S, Shin DS, Craig L, Tainer JA. Ultrahigh resolution and full-length pilin structures with insights for filament assembly, pathogenic functions, and vaccine potential. The Journal of Biological Chemistry. 286: 44254-65. PMID 22027840 DOI: 10.1074/Jbc.M111.297242  0.674
2010 Kashiwagi S, Kuraoka I, Fujiwara Y, Hitomi K, Cheng QJ, Fuss JO, Shin DS, Masutani C, Tainer JA, Hanaoka F, Iwai S. Characterization of a Y-Family DNA Polymerase eta from the Eukaryotic Thermophile Alvinella pompejana. Journal of Nucleic Acids. 2010. PMID 20936172 DOI: 10.4061/2010/701472  0.58
2010 Perry JJ, Shin DS, Tainer JA. Amyotrophic lateral sclerosis. Advances in Experimental Medicine and Biology. 685: 9-20. PMID 20687491 DOI: 10.1007/978-1-4419-6448-9_2  0.495
2010 Perry JJ, Shin DS, Getzoff ED, Tainer JA. The structural biochemistry of the superoxide dismutases. Biochimica Et Biophysica Acta. 1804: 245-62. PMID 19914407 DOI: 10.1016/j.bbapap.2009.11.004  0.567
2009 Shin DS, Didonato M, Barondeau DP, Hura GL, Hitomi C, Berglund JA, Getzoff ED, Cary SC, Tainer JA. Superoxide dismutase from the eukaryotic thermophile Alvinella pompejana: structures, stability, mechanism, and insights into amyotrophic lateral sclerosis. Journal of Molecular Biology. 385: 1534-55. PMID 19063897 DOI: 10.1016/J.Jmb.2008.11.031  0.572
2009 Shin DS, DiDonato M, Barondeau DP, Hura GL, Hitomi C, Berglund JA, Getzoff ED, Cary SC, Tainer JA. Superoxide Dismutase Structures, Stability, Mechanism and Insights into the Human Disease Amyotrophic Lateral Sclerosis from Eukaryotic Thermophile Alvinella pompejana Journal of Molecular Biology. 385: 1534. DOI: 10.1016/J.Jmb.2008.11.03  0.44
2008 Williams RS, Moncalian G, Williams JS, Yamada Y, Limbo O, Shin DS, Groocock LM, Cahill D, Hitomi C, Guenther G, Moiani D, Carney JP, Russell P, Tainer JA. Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair. Cell. 135: 97-109. PMID 18854158 DOI: 10.1016/J.Cell.2008.08.017  0.635
2005 Sarker AH, Tsutakawa SE, Kostek S, Ng C, Shin DS, Peris M, Campeau E, Tainer JA, Nogales E, Cooper PK. Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome. Molecular Cell. 20: 187-98. PMID 16246722 DOI: 10.1016/J.Molcel.2005.09.022  0.689
2005 Henscheid KL, Shin DS, Cary SC, Berglund JA. The splicing factor U2AF65 is functionally conserved in the thermotolerant deep-sea worm Alvinella pompejana. Biochimica Et Biophysica Acta. 1727: 197-207. PMID 15777616 DOI: 10.1016/J.Bbaexp.2005.01.008  0.315
2004 Shin DS, Chahwan C, Huffman JL, Tainer JA. Structure and function of the double-strand break repair machinery. Dna Repair. 3: 863-73. PMID 15279771 DOI: 10.1016/J.Dnarep.2004.03.022  0.618
2003 Shin DS, Pellegrini L, Daniels DS, Yelent B, Craig L, Bates D, Yu DS, Shivji MK, Hitomi C, Arvai AS, Volkmann N, Tsuruta H, Blundell TL, Venkitaraman AR, Tainer JA. Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2. The Embo Journal. 22: 4566-76. PMID 12941707 DOI: 10.1093/Emboj/Cdg429  0.75
2003 Craig L, Taylor RK, Pique ME, Adair BD, Arvai AS, Singh M, Lloyd SJ, Shin DS, Getzoff ED, Yeager M, Forest KT, Tainer JA. Type IV pilin structure and assembly: X-ray and EM analyses of Vibrio cholerae toxin-coregulated pilus and Pseudomonas aeruginosa PAK pilin. Molecular Cell. 11: 1139-50. PMID 12769840 DOI: 10.1016/S1097-2765(03)00170-9  0.67
2000 Hopfner KP, Karcher A, Shin D, Fairley C, Tainer JA, Carney JP. Mre11 and Rad50 from Pyrococcus furiosus: cloning and biochemical characterization reveal an evolutionarily conserved multiprotein machine. Journal of Bacteriology. 182: 6036-41. PMID 11029422 DOI: 10.1128/Jb.182.21.6036-6041.2000  0.581
2000 Hopfner KP, Karcher A, Shin DS, Craig L, Arthur LM, Carney JP, Tainer JA. Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily. Cell. 101: 789-800. PMID 10892749 DOI: 10.1016/S0092-8674(00)80890-9  0.715
1994 Czernik PJ, Shin DS, Hurlburt BK. Functional selection and characterization of DNA binding sites for trp repressor of Escherichia coli. Journal of Biological Chemistry. 269: 27869-27875. DOI: 10.1016/s0021-9258(18)46867-6  0.305
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