Ian Rambo - Related publications

Affiliations: 
Marine Sciences University of Texas at Austin, Austin, Texas, U.S.A. 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 McKay LJ, Nigro OD, Dlakić M, Luttrell KM, Rusch DB, Fields MW, Inskeep WP. Sulfur cycling and host-virus interactions in Aquificales-dominated biofilms from Yellowstone's hottest ecosystems. The Isme Journal. PMID 34650231 DOI: 10.1038/s41396-021-01132-4   
2021 Shah RM, Stephenson S, Crosswell J, Gorman D, Hillyer KE, Palombo EA, Jones OAH, Cook S, Bodrossy L, van de Kamp J, Walsh TK, Bissett A, Steven ADL, Beale DJ. Omics-based ecosurveillance uncovers the influence of estuarine macrophytes on sediment microbial function and metabolic redundancy in a tropical ecosystem. The Science of the Total Environment. 151175. PMID 34699819 DOI: 10.1016/j.scitotenv.2021.151175   
2021 Blagodatskaya E, Tarkka M, Knief C, Koller R, Peth S, Schmidt V, Spielvogel S, Uteau D, Weber M, Razavi BS. Bridging Microbial Functional Traits With Localized Process Rates at Soil Interfaces. Frontiers in Microbiology. 12: 625697. PMID 34777265 DOI: 10.3389/fmicb.2021.625697   
2021 Lyautey E, Bonnineau C, Billard P, Loizeau JL, Naffrechoux E, Tlili A, Topp E, Ferrari BJD, Pesce S. Diversity, Functions and Antibiotic Resistance of Sediment Microbial Communities From Lake Geneva Are Driven by the Spatial Distribution of Anthropogenic Contamination. Frontiers in Microbiology. 12: 738629. PMID 34733255 DOI: 10.3389/fmicb.2021.738629   
2021 Kyung Kim N, Lee SH, Kim Y, Park HD. Current understanding and perspectives in anaerobic digestion based on genome-resolved metagenomic approaches. Bioresource Technology. 126350. PMID 34813924 DOI: 10.1016/j.biortech.2021.126350   
2021 Ortiz M, Leung PM, Shelley G, Jirapanjawat T, Nauer PA, Van Goethem MW, Bay SK, Islam ZF, Jordaan K, Vikram S, Chown SL, Hogg ID, Makhalanyane TP, Grinter R, Cowan DA, et al. Multiple energy sources and metabolic strategies sustain microbial diversity in Antarctic desert soils. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34732568 DOI: 10.1073/pnas.2025322118   
2021 Ibrahim M, Raajaraam L, Raman K. Modelling microbial communities: Harnessing consortia for biotechnological applications. Computational and Structural Biotechnology Journal. 19: 3892-3907. PMID 34584635 DOI: 10.1016/j.csbj.2021.06.048   
2021 Giannari D, Ho CH, Mahadevan R. A gap-filling algorithm for prediction of metabolic interactions in microbial communities. Plos Computational Biology. 17: e1009060. PMID 34723959 DOI: 10.1371/journal.pcbi.1009060   
2021 Kim H, Kimbrel JA, Vaiana CA, Wollard JR, Mayali X, Buie CR. Bacterial response to spatial gradients of algal-derived nutrients in a porous microplate. The Isme Journal. PMID 34789844 DOI: 10.1038/s41396-021-01147-x   
2021 Jones ML, Rivett DW, Pascual-García A, Bell T. Relationships between community composition, productivity and invasion resistance in semi-natural bacterial microcosms. Elife. 10. PMID 34662276 DOI: 10.7554/eLife.71811   
2021 Tee HS, Waite D, Lear G, Handley KM. Microbial river-to-sea continuum: gradients in benthic and planktonic diversity, osmoregulation and nutrient cycling. Microbiome. 9: 190. PMID 34544488 DOI: 10.1186/s40168-021-01145-3   
2021 Baldassarre L, Levy S, Bar-Shalom R, Steindler L, Lotan T, Fraune S. Contribution of Maternal and Paternal Transmission to Bacterial Colonization in . Frontiers in Microbiology. 12: 726795. PMID 34707584 DOI: 10.3389/fmicb.2021.726795   
2021 Yin X, Wang W, Wang A, He M, Lin C, Ouyang W, Liu X. Microbial community structure and metabolic potential in the coastal sediments around the Yellow River Estuary. The Science of the Total Environment. 151582. PMID 34785215 DOI: 10.1016/j.scitotenv.2021.151582   
2021 Manirakiza B, Zhang S, Addo FG, Isabwe A, Nsabimana A. Exploring microbial diversity and ecological function of epiphytic and surface sediment biofilm communities in a shallow tropical lake. The Science of the Total Environment. 151821. PMID 34808175 DOI: 10.1016/j.scitotenv.2021.151821   
2021 Niu L, Xie X, Li Y, Hu Q, Wang C, Zhang W, Zhang H, Wang L. Effects of nitrogen on the longitudinal and vertical patterns of the composition and potential function of bacterial and archaeal communities in the tidal mudflats. The Science of the Total Environment. 151210. PMID 34715211 DOI: 10.1016/j.scitotenv.2021.151210   
2021 Rathore M, Sinha RK, Venkatachalam S, Krishnan KP. Microbial diversity and associated metabolic potential in the supraglacial habitat of a fast-retreating glacier: a case study of Patsio glacier, North-western Himalaya. Environmental Microbiology Reports. PMID 34664398 DOI: 10.1111/1758-2229.13017   
2021 Weiss AS, Burrichter AG, Durai Raj AC, von Strempel A, Meng C, Kleigrewe K, Münch PC, Rössler L, Huber C, Eisenreich W, Jochum LM, Göing S, Jung K, Lincetto C, Hübner J, et al. In vitro interaction network of a synthetic gut bacterial community. The Isme Journal. PMID 34857933 DOI: 10.1038/s41396-021-01153-z   
2021 Gao FZ, He LY, Hu LX, Chen J, Yang YY, Zou HY, He LX, Bai H, Liu YS, Zhao JL, Ying GG. Anthropogenic activities and seasonal properties jointly drive the assemblage of bacterial communities in subtropical river basins. The Science of the Total Environment. 151476. PMID 34742952 DOI: 10.1016/j.scitotenv.2021.151476   
2021 He R, Zeng J, Zhao D, Wang S, Wu QL. Decreased spatial variation and deterministic processes of bacterial community assembly in the rhizosphere of Phragmites australis across the Middle-Lower Yangtze plain. Molecular Ecology. PMID 34846091 DOI: 10.1111/mec.16298   
2021 Bai S, Zhang P, Zhang C, Du J, Du X, Zhu C, Liu J, Xie P, Li S. Comparative Study of the Gut Microbiota Among Four Different Marine Mammals in an Aquarium. Frontiers in Microbiology. 12: 769012. PMID 34745077 DOI: 10.3389/fmicb.2021.769012   
2021 Huang Z, Hou D, Zhou R, Zeng S, Xing C, Wei D, Deng X, Yu L, Wang H, Deng Z, Weng S, Ning D, Xiao C, Yan Q, Zhou J, et al. Environmental Water and Sediment Microbial Communities Shape Intestine Microbiota for Host Health: The Central Dogma in an Anthropogenic Aquaculture Ecosystem. Frontiers in Microbiology. 12: 772149. PMID 34795658 DOI: 10.3389/fmicb.2021.772149   
2021 Xu M, Xu RZ, Shen XX, Gao P, Xue ZX, Huang DC, Jin GQ, Li C, Cao JS. The response of sediment microbial communities to temporal and site-specific variations of pollution in interconnected aquaculture pond and ditch systems. The Science of the Total Environment. 806: 150498. PMID 34563908 DOI: 10.1016/j.scitotenv.2021.150498   
2021 Chithira MS, Aishwarya PV, Mohan AS, Antony SP. Metagenomic analysis of microbial communities in the sediments of a semi-intensive penaeid shrimp culture system. Journal, Genetic Engineering & Biotechnology. 19: 136. PMID 34499256 DOI: 10.1186/s43141-021-00237-9   
2021 Giraud C, Callac N, Beauvais M, Mailliez JR, Ansquer D, Selmaoui-Folcher N, Pham D, Wabete N, Boulo V. Potential lineage transmission within the active microbiota of the eggs and the nauplii of the shrimp : possible influence of the rearing water and more. Peerj. 9: e12241. PMID 34820157 DOI: 10.7717/peerj.12241   
2021 Wang Y, Wu M, Wang Y, Wang X, Yu M, Liu G, Tang H. Diversity and function of microbial communities in the sand sheath of by metagenomic analysis. Canadian Journal of Microbiology. 1-13. PMID 34807727 DOI: 10.1139/cjm-2021-0129   
2021 Hsu HC, Chen JS, Nagarajan V, Hussain B, Huang SW, Rathod J, Hsu BM. Assessment of Temporal Effects of a Mud Volcanic Eruption on the Bacterial Community and Their Predicted Metabolic Functions in the Mud Volcanic Sites of Niaosong, Southern Taiwan. Microorganisms. 9. PMID 34835440 DOI: 10.3390/microorganisms9112315   
2021 Fan Q, Fan X, Fu P, Li Y, Zhao Y, Hua D. Anaerobic digestion of wood vinegar wastewater using domesticated sludge: focusing on the relationship between organic degradation and microbial communities (archaea, bacteria, and fungi). Bioresource Technology. 126384. PMID 34808316 DOI: 10.1016/j.biortech.2021.126384   
2021 Sun H, Chang H, Tang W, Zhang X, Yang H, Zhang F, Zhang Y. Effects of influent immigration and environmental factors on bacterial assembly of activated sludge microbial communities. Environmental Research. 112426. PMID 34843723 DOI: 10.1016/j.envres.2021.112426   
2021 Mabwi HA, Hitayezu E, Mauliasari IR, Mwaikono KS, Yoon HS, Komba EVG, Pan CH, Cha KH. Simulation of the mucosal environment in the re-construction of the synthetic gut microbial ecosystem. Journal of Microbiological Methods. 106351. PMID 34710513 DOI: 10.1016/j.mimet.2021.106351   
2021 McNichol J, Dyksma S, Mußmann M, Seewald JS, Sylva SP, Sievert SM. Genus-Specific Carbon Fixation Activity Measurements Reveal Distinct Responses to Oxygen Among Hydrothermal Vent . Applied and Environmental Microbiology. AEM0208321. PMID 34788061 DOI: 10.1128/AEM.02083-21   
2021 Matsumoto K, Sakami T, Watanabe T, Taniuchi Y, Kuwata A, Kakehi S, Engkong T, Igarashi Y, Kinoshita S, Asakawa S, Hattori M, Watabe S, Ishino Y, Kobayashi T, Gojobori T, et al. Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters. Plos One. 16: e0257862. PMID 34637433 DOI: 10.1371/journal.pone.0257862   
2021 Huergo LF, Conzentino M, Gonçalves MV, Gernet MV, Reis RA, Pedrosa FO, Baura VA, Pires A, Gerhardt ECM, Tuleski TR, Balsanelli E, Guizelini D, Souza EM, Chandra G, Cruz LM. The microbiome of a shell mound: ancient anthropogenic waste as a source of Streptomyces degrading recalcitrant polysaccharides. World Journal of Microbiology & Biotechnology. 37: 210. PMID 34719741 DOI: 10.1007/s11274-021-03174-4   
2021 Fang G, Yu H, Sheng H, Tang Y, Liang Z. Comparative analysis of microbial communities between water and sediment in Laoshan Bay marine ranching with varied aquaculture activities. Marine Pollution Bulletin. 173: 112990. PMID 34634629 DOI: 10.1016/j.marpolbul.2021.112990   
2021 Innard N, Chong JPJ. The challenges of monitoring and manipulating anaerobic microbial communities. Bioresource Technology. 126326. PMID 34780902 DOI: 10.1016/j.biortech.2021.126326   
2021 Delmont TO. Discovery of nondiazotrophic species abundant and widespread in the open ocean. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34750267 DOI: 10.1073/pnas.2112355118   
2021 Pelsma KAJ, In 't Zandt MH, Op den Camp HJM, Jetten MSM, Dean JF, Welte CU. Amsterdam urban canals contain novel niches for methane-cycling microorganisms. Environmental Microbiology. PMID 34863018 DOI: 10.1111/1462-2920.15864   
2021 She Z, Pan X, Wang J, Shao R, Wang G, Wang S, Yue Z. Vertical environmental gradient drives prokaryotic microbial community assembly and species coexistence in a stratified acid mine drainage lake. Water Research. 206: 117739. PMID 34653798 DOI: 10.1016/j.watres.2021.117739   
2021 Shi J, Zhang B, Liu J, Fang Y, Wang A. Spatiotemporal dynamics in microbial communities mediating biogeochemical cycling of nutrients across the Xiaowan Reservoir in Lancang River. The Science of the Total Environment. 151862. PMID 34826492 DOI: 10.1016/j.scitotenv.2021.151862   
2021 Hörstmann C, Buttigieg PL, John U, Raes EJ, Wolf-Gladrow D, Bracher A, Waite AM. Microbial diversity through an oceanographic lens: refining the concept of ocean provinces through trophic-level analysis and productivity-specific length scales. Environmental Microbiology. PMID 34766422 DOI: 10.1111/1462-2920.15832   
2021 Chen X, Feng L, Zheng W, Chen S, Yang Y, Xie S. Shifts in structure and function of bacterial community in river and fish pond sediments after a phenol spill. Environmental Science and Pollution Research International. PMID 34622407 DOI: 10.1007/s11356-021-16514-6   
2021 Iquebal MA, Passari AK, Jagannadham J, Ahmad F, Leo VV, Singh G, Jaiswal S, Rai A, Kumar D, Singh BP. Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens. Genomics. PMID 34699904 DOI: 10.1016/j.ygeno.2021.10.004   
2021 Zhang J, Liu GH, Wei Q, Liu S, Shao Y, Zhang J, Qi L, Wang H. Regional discrepancy of microbial community structure in activated sludge system from Chinese WWTPs based on high-throughput 16S rDNA sequencing. The Science of the Total Environment. 151751. PMID 34843777 DOI: 10.1016/j.scitotenv.2021.151751   
2021 Kim T, Behrens S, LaPara TM. Microbial Community Composition in Municipal Wastewater Treatment Bioreactors Follows a Distance Decay Pattern Primarily Controlled by Environmental Heterogeneity. Msphere. e0064821. PMID 34668755 DOI: 10.1128/mSphere.00648-21   
2021 Ren F, Yan DH, Liu Y, Wang C, Guo C. Bacterial and fungal communities of traditional fermented Chinese soybean paste (Doujiang) and their properties. Food Science & Nutrition. 9: 5457-5466. PMID 34646516 DOI: 10.1002/fsn3.2505   
2021 Li L, He Z, Liang T, Sheng T, Zhang F, Wu D, Ma F. Colonization of biofilm in wastewater treatment: A review. Environmental Pollution (Barking, Essex : 1987). 118514. PMID 34808308 DOI: 10.1016/j.envpol.2021.118514   
2021 Cai M, Duan C, Zhang X, Pan J, Liu Y, Zhang C, Li M. Genomic and transcriptomic dissection of Theionarchaea in marine ecosystem. Science China. Life Sciences. PMID 34668130 DOI: 10.1007/s11427-021-1996-x   
2021 Santos JCD, Lopes DRG, Silva LCF, Ramos JLL, Dias RS, Lima HS, Sousa MP, Waldow VA, Paula SO, Ferreira SO, Silva CCD. Characterization of the biofilm structure and microbial diversity of sulfate-reducing bacteria from petroleum produced water supplemented by different carbon sources. Journal of Environmental Management. 304: 114189. PMID 34864413 DOI: 10.1016/j.jenvman.2021.114189   
2021 Checcucci A, Luise D, Modesto M, Correa F, Bosi P, Mattarelli P, Trevisi P. Assessment of Biolog Ecoplate method for functional metabolic diversity of aerotolerant pig fecal microbiota. Applied Microbiology and Biotechnology. 105: 6033-6045. PMID 34296337 DOI: 10.1007/s00253-021-11449-x   
2021 Xiao X, Zhu Y, Gao C, Zhang Y, Gao Y, Zhao Y. Microbial inoculations improved rice yields by altering the presence of soil rare bacteria. Microbiological Research. 254: 126910. PMID 34768028 DOI: 10.1016/j.micres.2021.126910   
2021 Jurelevicius D, Pereira RDS, da Mota FF, Cury JC, de Oliveira IC, Rosado AS, Mason OU, Jansson JK, Seldin L. Metagenomic analysis of microbial communities across a transect from low to highly hydrocarbon-contaminated soils in King George Island, Maritime Antarctica. Geobiology. PMID 34545693 DOI: 10.1111/gbi.12472