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Ian McDonald - Publications

Affiliations: 
University of Waikato–New Zealand, Hamilton, Waikato, New Zealand 
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53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2012 Cox MJ, Schäfer H, Nightingale PD, McDonald IR, Murrell JC. Diversity of methyl halide-degrading microorganisms in oceanic and coastal waters. Fems Microbiology Letters. 334: 111-8. PMID 22724426 DOI: 10.1111/J.1574-6968.2012.02624.X  0.725
2011 Warneke S, Schipper LA, Bruesewitz DA, McDonald I, Cameron S. Rates, controls and potential adverse effects of nitrate removal in a denitrification bed Ecological Engineering. 37: 511-522. DOI: 10.1016/J.Ecoleng.2010.12.006  0.304
2008 McDonald IR, Bodrossy L, Chen Y, Murrell JC. Molecular ecology techniques for the study of aerobic methanotrophs. Applied and Environmental Microbiology. 74: 1305-15. PMID 18165358 DOI: 10.1128/Aem.02233-07  0.423
2007 Neufeld JD, Schäfer H, Cox MJ, Boden R, McDonald IR, Murrell JC. Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism. The Isme Journal. 1: 480-91. PMID 18043650 DOI: 10.1038/Ismej.2007.65  0.668
2006 Dumont MG, Radajewski SM, Miguez CB, McDonald IR, Murrell JC. Identification of a complete methane monooxygenase operon from soil by combining stable isotope probing and metagenomic analysis. Environmental Microbiology. 8: 1240-50. PMID 16817932 DOI: 10.1111/J.1462-2920.2006.01018.X  0.546
2006 McDonald IR, Miguez CB, Rogge G, Bourque D, Wendlandt KD, Groleau D, Murrell JC. Diversity of soluble methane monooxygenase-containing methanotrophs isolated from polluted environments. Fems Microbiology Letters. 255: 225-32. PMID 16448499 DOI: 10.1111/J.1574-6968.2005.00090.X  0.531
2005 Theisen AR, Ali MH, Radajewski S, Dumont MG, Dunfield PF, McDonald IR, Dedysh SN, Miguez CB, Murrell JC. Regulation of methane oxidation in the facultative methanotroph Methylocella silvestris BL2. Molecular Microbiology. 58: 682-92. PMID 16238619 DOI: 10.1111/J.1365-2958.2005.04861.X  0.49
2005 Lin JL, Joye SB, Scholten JC, Schäfer H, McDonald IR, Murrell JC. Analysis of methane monooxygenase genes in mono lake suggests that increased methane oxidation activity may correlate with a change in methanotroph community structure. Applied and Environmental Microbiology. 71: 6458-62. PMID 16204580 DOI: 10.1128/Aem.71.10.6458-6462.2005  0.453
2005 McDonald IR, Kämpfer P, Topp E, Warner KL, Cox MJ, Hancock TL, Miller LG, Larkin MJ, Ducrocq V, Coulter C, Harper DB, Murrell JC, Oremland RS. Aminobacter ciceronei sp. nov. and Aminobacter lissarensis sp. nov., isolated from various terrestrial environments. International Journal of Systematic and Evolutionary Microbiology. 55: 1827-32. PMID 16166673 DOI: 10.1099/Ijs.0.63716-0  0.622
2005 Borodina E, Cox MJ, McDonald IR, Murrell JC. Use of DNA-stable isotope probing and functional gene probes to investigate the diversity of methyl chloride-utilizing bacteria in soil. Environmental Microbiology. 7: 1318-28. PMID 16104855 DOI: 10.1111/J.1462-5822.2005.00819.X  0.687
2005 Moosvi SA, McDonald IR, Pearce DA, Kelly DP, Wood AP. Molecular detection and isolation from antarctica of methylotrophic bacteria able to grow with methylated sulfur compounds. Systematic and Applied Microbiology. 28: 541-54. PMID 16104352 DOI: 10.1016/j.syapm.2005.03.002  0.415
2005 Warner KL, Larkin MJ, Harper DB, Murrell JC, McDonald IR. Analysis of genes involved in methyl halide degradation in Aminobacter lissarensis CC495. Fems Microbiology Letters. 251: 45-51. PMID 16102909 DOI: 10.1016/J.Femsle.2005.07.021  0.53
2005 McDonald IR, Smith K, Lidstrom ME. Methanotrophic populations in estuarine sediment from Newport Bay, California. Fems Microbiology Letters. 250: 287-93. PMID 16085370 DOI: 10.1016/J.Femsle.2005.07.016  0.319
2005 Anesti V, McDonald IR, Ramaswamy M, Wade WG, Kelly DP, Wood AP. Isolation and molecular detection of methylotrophic bacteria occurring in the human mouth. Environmental Microbiology. 7: 1227-38. PMID 16011760 DOI: 10.1111/j.1462-2920.2005.00805.x  0.354
2005 Schäfer H, McDonald IR, Nightingale PD, Murrell JC. Evidence for the presence of a CmuA methyltransferase pathway in novel marine methyl halide-oxidizing bacteria. Environmental Microbiology. 7: 839-52. PMID 15892703 DOI: 10.1111/J.1462-2920.2005.00757.X  0.692
2005 Hesselsoe M, Boysen S, Iversen N, Jørgensen L, Murrell JC, McDonald I, Radajewski S, Thestrup H, Roslev P. Degradation of organic pollutants by methane grown microbial consortia. Biodegradation. 16: 435-48. PMID 15865157 DOI: 10.1007/S10532-004-4721-2  0.538
2005 Franklin MP, McDonald IR, Bourne DG, Owens NJ, Upstill-Goddard RC, Murrell JC. Bacterial diversity in the bacterioneuston (sea surface microlayer): the bacterioneuston through the looking glass. Environmental Microbiology. 7: 723-36. PMID 15819854 DOI: 10.1111/J.1462-2920.2004.00736.X  0.52
2005 McDonald IR, Radajewski S, Murrell JC. Stable isotope probing of nucleic acids in methanotrophs and methylotrophs: A review Organic Geochemistry. 36: 779-787. DOI: 10.1016/J.Orggeochem.2005.01.005  0.485
2004 Lin JL, Radajewski S, Eshinimaev BT, Trotsenko YA, McDonald IR, Murrell JC. Molecular diversity of methanotrophs in Transbaikal soda lake sediments and identification of potentially active populations by stable isotope probing. Environmental Microbiology. 6: 1049-60. PMID 15344930 DOI: 10.1111/J.1462-2920.2004.00635.X  0.533
2004 Borodina E, McDonald IR, Murrell JC. Chloromethane-dependent expression of the cmu gene cluster of Hyphomicrobium chloromethanicum. Applied and Environmental Microbiology. 70: 4177-86. PMID 15240299 DOI: 10.1128/Aem.70.7.4177-4186.2004  0.441
2004 Hutchens E, Radajewski S, Dumont MG, McDonald IR, Murrell JC. Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing. Environmental Microbiology. 6: 111-20. PMID 14756876 DOI: 10.1046/J.1462-2920.2003.00543.X  0.517
2004 Miller LG, Warner KL, Baesman SM, Oremland RS, McDonald IR, Radajewski S, Murrell JC. Degradation of methyl bromide and methyl chloride in soil microcosms: Use of stable C isotope fractionation and stable isotope probing to identify reactions and the responsible microorganisms Geochimica Et Cosmochimica Acta. 68: 3271-3283. DOI: 10.1016/J.Gca.2003.11.028  0.572
2003 Stafford GP, Scanlan J, McDonald IR, Murrell JC. rpoN, mmoR and mmoG, genes involved in regulating the expression of soluble methane monooxygenase in Methylosinus trichosporium OB3b. Microbiology (Reading, England). 149: 1771-84. PMID 12855729 DOI: 10.1099/Mic.0.26060-0  0.473
2003 Radajewski S, McDonald IR, Murrell JC. Stable-isotope probing of nucleic acids: a window to the function of uncultured microorganisms. Current Opinion in Biotechnology. 14: 296-302. PMID 12849783 DOI: 10.1016/S0958-1669(03)00064-8  0.456
2002 Schaefer JK, Goodwin KD, McDonald IR, Murrell JC, Oremland RS. Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph that grows on methyl bromide. International Journal of Systematic and Evolutionary Microbiology. 52: 851-9. PMID 12054249 DOI: 10.1099/00207713-52-3-851  0.518
2002 McDonald IR, Warner KL, McAnulla C, Woodall CA, Oremland RS, Murrell JC. A review of bacterial methyl halide degradation: biochemistry, genetics and molecular ecology. Environmental Microbiology. 4: 193-203. PMID 12010126 DOI: 10.1046/j.1462-2920.2002.00290.x  0.544
2002 Pacheco-Oliver M, McDonald IR, Groleau D, Murrell JC, Miguez CB. Detection of methanotrophs with highly divergent pmoA genes from Arctic soils. Fems Microbiology Letters. 209: 313-9. PMID 12007824 DOI: 10.1111/J.1574-6968.2002.Tb11150.X  0.537
2001 Bourne DG, McDonald IR, Murrell JC. Comparison of pmoA PCR primer sets as tools for investigating methanotroph diversity in three Danish soils. Applied and Environmental Microbiology. 67: 3802-9. PMID 11525970 DOI: 10.1128/Aem.67.9.3802-3809.2001  0.416
2001 Kaluzhnaya M, Khmelenina V, Eshinimaev B, Suzina N, Nikitin D, Solonin A, Lin J, McDonald I, Murrell C, Trotsenko Y. Taxonomic Characterization of New Alkaliphilic and Alkalitolerant Methanotrophs from Soda Lakes of the Southeastern Transbaikal Region and description of Methylomicrobium buryatense sp.nov. Systematic and Applied Microbiology. 24: 166-176. PMID 11518319 DOI: 10.1078/0723-2020-00028  0.376
2001 Woodall CA, Warner KL, Oremland RS, Murrell JC, McDonald IR. Identification of methyl halide-utilizing genes in the methyl bromide-utilizing bacterial strain IMB-1 suggests a high degree of conservation of methyl halide-specific genes in gram-negative bacteria. Applied and Environmental Microbiology. 67: 1959-63. PMID 11282657 DOI: 10.1128/AEM.67.4.1959-1963.2001  0.564
2001 McAnulla C, Woodall CA, McDonald IR, Studer A, Vuilleumier S, Leisinger T, Murrell JC. Chloromethane utilization gene cluster from Hyphomicrobium chloromethanicum strain CM2(T) and development of functional gene probes to detect halomethane-degrading bacteria. Applied and Environmental Microbiology. 67: 307-16. PMID 11133460 DOI: 10.1128/Aem.67.1.307-316.2001  0.503
2001 McAnulla C, McDonald IR, Murrell J. Methyl chloride utilising bacteria are ubiquitous in the natural environment Fems Microbiology Letters. 201: 151-155. DOI: 10.1111/J.1574-6968.2001.TB10749.X  0.484
2001 McDonald IR, Doronina NV, Trotsenko YA, McAnulla C, Murrell JC. Hyphomicrobium chloromethanicum sp. nov. and Methylobacterium chloromethanicum sp. nov., chloromethane-utilizing bacteria isolated from a polluted environment. International Journal of Systematic and Evolutionary Microbiology. 51: 119-122. DOI: 10.1099/00207713-51-1-119  0.442
2000 Fjellbirkeland A, Bemanian V, McDonald IR, Murrell JC, Jensen HB. Molecular analysis of an outer membrane protein, MopB, of Methylococcus capsulatus (Bath) and structural comparisons with proteins of the OmpA family. Archives of Microbiology. 173: 346-51. PMID 10896213 DOI: 10.1007/S002030000151  0.444
2000 Murrell JC, Gilbert B, McDonald IR. Molecular biology and regulation of methane monooxygenase. Archives of Microbiology. 173: 325-32. PMID 10896210 DOI: 10.1007/S002030000158  0.457
2000 Murrell JC, McDonald IR, Gilbert B. Regulation of expression of methane monooxygenases by copper ions. Trends in Microbiology. 8: 221-5. PMID 10785638 DOI: 10.1016/S0966-842X(00)01739-X  0.376
2000 Gilbert B, McDonald IR, Finch R, Stafford GP, Nielsen AK, Murrell JC. Molecular analysis of the pmo (particulate methane monooxygenase) operons from two type II methanotrophs. Applied and Environmental Microbiology. 66: 966-75. PMID 10698759 DOI: 10.1128/Aem.66.3.966-975.2000  0.516
1999 McDonald IR, Upton M, Hall G, Pickup RW, Edwards C, Saunders JR, Ritchie DA, Murrell JC. Molecular Ecological Analysis of Methanogens and Methanotrophs in Blanket Bog Peat. Microbial Ecology. 38: 225-233. PMID 10541784 DOI: 10.1007/s002489900172  0.505
1999 Holmes AJ, Roslev P, McDonald IR, Iversen N, Henriksen K, Murrell JC. Characterization of methanotrophic bacterial populations in soils showing atmospheric methane uptake. Applied and Environmental Microbiology. 65: 3312-8. PMID 10427012 DOI: 10.1128/Aem.65.8.3312-3318.1999  0.46
1999 de Marco P, Moradas-Ferreira P, Higgins TP, McDonald I, Kenna EM, Murrell JC. Molecular analysis of a novel methanesulfonic acid monooxygenase from the methylotroph Methylosulfonomonas methylovora. Journal of Bacteriology. 181: 2244-51. PMID 10094704 DOI: 10.1128/Jb.181.7.2244-2251.1999  0.536
1999 de Marco P, Moradas-Ferreira P, Higgins TP, McDonald I, Kenna EM, Murrell JC. Molecular Analysis of a Novel Methanesulfonic Acid Monooxygenase from the Methylotroph Methylosulfonomonas methylovora Journal of Bacteriology. 181: 2244-2251. DOI: 10.1128/JB.181.7.2244-2251.1999  0.495
1999 Grosse S, Laramee L, Wendlandt K, McDonald IR, Miguez CB, Kleber H. Purification and Characterization of the Soluble Methane Monooxygenase of the Type II Methanotrophic BacteriumMethylocystis sp. Strain WI 14 Applied and Environmental Microbiology. 65: 3929-3935. DOI: 10.1128/AEM.65.9.3929-3935.1999  0.302
1999 Bodrossy L, Kovács KL, McDonald IR, Murrell J. A novel thermophilic methane-oxidising γ-Proteobacterium Fems Microbiology Letters. 170: 335-341. DOI: 10.1111/J.1574-6968.1999.Tb13392.X  0.51
1998 Wood AP, Kelly DP, McDonald IR, Jordan SL, Morgan TD, Khan S, Murrell JC, Borodina E. A novel pink-pigmented facultative methylotroph, Methylobacterium thiocyanatum sp. nov., capable of growth on thiocyanate or cyanate as sole nitrogen sources. Archives of Microbiology. 169: 148-58. PMID 9446686 DOI: 10.1007/s002030050554  0.462
1998 Murrell J, McDonald IR, Bourne DG. Molecular methods for the study of methanotroph ecology Fems Microbiology Ecology. 27: 103-114. DOI: 10.1111/J.1574-6941.1998.Tb00528.X  0.481
1998 Edwards C, Hales BA, Hall GH, McDonald IR, Murrell JC, Pickup R, Ritchie DA, Saunders JR, Simon BM, Upton M. Microbiological processes in the terrestrial carbon cycle: Methane cycling in peat Atmospheric Environment. 32: 3247-3255. DOI: 10.1016/S1352-2310(98)00107-1  0.365
1997 McDonald IR, Murrell JC. The particulate methane monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs. Fems Microbiology Letters. 156: 205-10. PMID 9513266 DOI: 10.1111/J.1574-6968.1997.Tb12728.X  0.537
1997 Jordan SL, McDonald IR, Kraczkiewicz-Dowjat AJ, Kelly DP, Rainey FA, Murrell JC, Wood AP. Autotrophic growth on carbon disulfide is a property of novel strains of Paracoccus denitrificans. Archives of Microbiology. 168: 225-36. PMID 9382702 DOI: 10.1007/S002030050492  0.474
1997 McDonald IR, Murrell JC. The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Applied and Environmental Microbiology. 63: 3218-3224. DOI: 10.1128/AEM.63.8.3218-3224.1997  0.437
1997 McDonald IR, Uchiyama H, Kambe S, Yagi O, Murrell JC. The soluble methane monooxygenase gene cluster of the trichloroethylene-degrading methanotroph Methylocystis sp. strain M. Applied and Environmental Microbiology. 63: 1898-1904. DOI: 10.1128/AEM.63.5.1898-1904.1997  0.461
1997 RITCHIE D, EDWARDS C, McDONALD IR, MURRELL JC. Detection of methanogens and methanotrophs in natural environments Global Change Biology. 3: 339-350. DOI: 10.1046/J.1365-2486.1997.00104.X  0.384
1996 McDonald IR, Kelly DP, Murrell JC, Wood AP. Taxonomic relationships of Thiobacillus halophilus, T. aquaesulis, and other species of Thiobacillus, as determined using 16S rDNA sequencing. Archives of Microbiology. 166: 394-8. PMID 9082916 DOI: 10.1007/Bf01682985  0.406
1995 McDonald IR, Kenna EM, Murrell JC. Detection of methanotrophic bacteria in environmental samples with the PCR. Applied and Environmental Microbiology. 61: 116-121. DOI: 10.1128/AEM.61.1.116-121.1995  0.406
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