Karen E Koch - Publications

Affiliations: 
1979-1980 Agronomy University of Wisconsin, Madison, Madison, WI 

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Hunter CT, McCarty DR, Koch KE. Independent evolution of transposase and TIRs facilitated by recombination between transposons from divergent clades in maize. Proceedings of the National Academy of Sciences of the United States of America. 120: e2305298120. PMID 37490540 DOI: 10.1073/pnas.2305298120  0.617
2022 Guan JC, Li C, Flint-Garcia S, Suzuki M, Wu S, Saunders JW, Dong L, Bouwmeester HJ, McCarty DR, Koch KE. Maize domestication phenotypes reveal strigolactone networks coordinating grain size evolution with kernel-bearing cupule architecture. The Plant Cell. PMID 36573016 DOI: 10.1093/plcell/koac370  0.602
2022 Yang B, Wang J, Yu M, Zhang M, Zhong Y, Wang T, Liu P, Song W, Zhao H, Fastner A, Suter M, Rentsch D, Ludewig U, Jin W, Geiger D, ... ... Koch KE, et al. The sugar transporter ZmSUGCAR1 of the Nitrate Transporter 1/Peptide Transporter family is critical for maize grain filling. The Plant Cell. PMID 36047828 DOI: 10.1093/plcell/koac256  0.559
2022 Finegan C, Boehlein SK, Leach KA, Madrid G, Hannah LC, Koch KE, Tracy WF, Resende MFR. Genetic Perturbation of the Starch Biosynthesis in Maize Endosperm Reveals Sugar-Responsive Gene Networks. Frontiers in Plant Science. 12: 800326. PMID 35211133 DOI: 10.3389/fpls.2021.800326  0.313
2021 Duke ER, Johnson CR, Koch KE. ACCUMULATION OF PHOSPHORUS, DRY MATTER AND BETAINE DURING NaCl STRESS OF SPLIT-ROOT CITRUS SEEDLINGS COLONIZED WITH VESICULAR-ARBUSCULAR MYCORRHIZAL FUNGI ON ZERO, ONE OR TWO HALVES. The New Phytologist. 104: 583-590. PMID 33873868 DOI: 10.1111/J.1469-8137.1986.Tb00658.X  0.336
2020 Marcon C, Altrogge L, Win YN, Stöcker T, Gardiner JM, Portwood JL, Opitz N, Kortz A, Baldauf JA, Hunter CT, McCarty DR, Koch KE, Schoof H, Hochholdinger F. BonnMu: A Sequence-Indexed Resource of Transposon-Induced Maize Mutations for Functional Genomics Studies. Plant Physiology. 184: 620-631. PMID 33890023 DOI: 10.1104/pp.20.00478  0.632
2020 Marcon C, Altrogge L, Win YN, Stöcker T, Gardiner JM, Portwood JL, Opitz N, Kortz A, Baldauf J, Hunter CT, McCarty DR, Koch KE, Schoof H, Hochholdinger F. BonnMu: a sequence-indexed resource of transposon-induced maize mutations for functional genomics studies. Plant Physiology. PMID 32769162 DOI: 10.1104/Pp.20.00478  0.661
2019 Boehlein SK, Liu P, Webster A, Ribeiro C, Suzuki M, Wu S, Guan JC, Stewart JD, Tracy WF, Settles AM, McCarty DR, Koch KE, Hannah LC, Hennen-Bierwagen TA, Myers AM. Effects of long-term exposure to elevated temperature on Zea mays endosperm development during grain fill. The Plant Journal : For Cell and Molecular Biology. PMID 30746832 DOI: 10.1111/Tpj.14283  0.589
2019 Koch KE. CARBOHYDRATE-MODULATED GENE EXPRESSION IN PLANTS. Annual Review of Plant Physiology and Plant Molecular Biology. 47: 509-540. PMID 15012299 DOI: 10.1146/ANNUREV.ARPLANT.47.1.509  0.313
2019 Koch KE, Nolte KD, Duke ER, McCarty DR, Avigne WT. Sugar Levels Modulate Differential Expression of Maize Sucrose Synthase Genes. The Plant Cell. 4: 59-69. PMID 12297629 DOI: 10.1105/Tpc.4.1.59  0.652
2019 Xu J, Avigne WT, McCarty DR, Koch KE. A Similar Dichotomy of Sugar Modulation and Developmental Expression Affects Both Paths of Sucrose Metabolism: Evidence from a Maize Invertase Gene Family. The Plant Cell. 8: 1209-1220. PMID 12239414 DOI: 10.1105/Tpc.8.7.1209  0.663
2019 Nolte KD, Hendrix DL, Radin JW, Koch KE. Sucrose Synthase Localization during Initiation of Seed Development and Trichome Differentiation in Cotton Ovules. Plant Physiology. 109: 1285-1293. PMID 12228669 DOI: 10.1104/Pp.109.4.1285  0.356
2019 Djidonou D, Zhao X, Koch KE, Zotarelli L. Nitrogen Accumulation and Root Distribution of Grafted Tomato Plants as Affected by Nitrogen Fertilization Hortscience. 54: 1907-1914. DOI: 10.21273/Hortsci14066-19  0.302
2018 Springer NM, Anderson SN, Andorf CM, Ahern KR, Bai F, Barad O, Barbazuk WB, Bass HW, Baruch K, Ben-Zvi G, Buckler ES, Bukowski R, Campbell MS, Cannon EKS, Chomet P, ... Koch KE, et al. The maize W22 genome provides a foundation for functional genomics and transposon biology. Nature Genetics. PMID 30061736 DOI: 10.1038/S41588-018-0158-0  0.615
2018 Hunter CT, Saunders JW, Magallanes-Lundback M, Christensen SA, Willett D, Stinard PS, Li QB, Lee K, DellaPenna D, Koch KE. Maize w3 disrupts homogentisate solanesyl transferase (ZmHst) and reveals a plastoquinone-9 independent path for phytoene desaturation and tocopherol accumulation in kernels. The Plant Journal : For Cell and Molecular Biology. PMID 29315977 DOI: 10.1111/Tpj.13821  0.369
2017 Gabay-Laughnan S, Settles AM, Hannah LC, Porch TG, Becraft PW, McCarty DR, Koch KE, Zhao L, Kamps TL, Chamusco KC, Chase CD. Restorer-of-Fertility Mutations Recovered in Transposon-Active Lines of S Male-Sterile Maize. G3 (Bethesda, Md.). PMID 29167273 DOI: 10.1534/G3.117.300304  0.622
2017 Tan BC, Guan JC, Ding S, Wu S, Saunders JW, Koch KE, McCarty DR. Structure and Origin of the White Cap Locus and Its Role in Evolution of Grain Color in Maize. Genetics. PMID 28159756 DOI: 10.1534/Genetics.116.198911  0.642
2016 Liu P, McCarty DR, Koch KE. Transposon Mutagenesis and Analysis of Mutants in UniformMu Maize (Zea mays). Current Protocols in Plant Biology. 1: 451-465. PMID 31725958 DOI: 10.1002/cppb.20029  0.63
2016 Giuseppe PO, Santos MLD, Sousa SM, Koch KE, Yunes JA, Aparicio R, Murakami MT. A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases. Biochemical and Biophysical Research Communications. 474: 696-701. PMID 27154221 DOI: 10.1016/J.Bbrc.2016.05.011  0.596
2015 Sosso D, Luo D, Li QB, Sasse J, Yang J, Gendrot G, Suzuki M, Koch KE, McCarty DR, Chourey PS, Rogowsky PM, Ross-Ibarra J, Yang B, Frommer WB. Seed filling in domesticated maize and rice depends on SWEET-mediated hexose transport. Nature Genetics. PMID 26523777 DOI: 10.1038/Ng.3422  0.612
2014 Andorf CM, Kopylov M, Dobbs D, Koch KE, Stroupe ME, Lawrence CJ, Bass HW. G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient deprivation. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 41: 627-47. PMID 25527104 DOI: 10.1016/J.Jgg.2014.10.004  0.358
2014 Hunter CT, Suzuki M, Saunders J, Wu S, Tasi A, McCarty DR, Koch KE. Phenotype to genotype using forward-genetic Mu-seq for identification and functional classification of maize mutants. Frontiers in Plant Science. 4: 545. PMID 24432026 DOI: 10.3389/Fpls.2013.00545  0.676
2013 McCarty DR, Latshaw S, Wu S, Suzuki M, Hunter CT, Avigne WT, Koch KE. Mu-seq: sequence-based mapping and identification of transposon induced mutations. Plos One. 8: e77172. PMID 24194867 DOI: 10.1371/Journal.Pone.0077172  0.653
2013 McCarty DR, Suzuki M, Hunter C, Collins J, Avigne WT, Koch KE. Genetic and molecular analyses of UniformMu transposon insertion lines. Methods in Molecular Biology (Clifton, N.J.). 1057: 157-66. PMID 23918427 DOI: 10.1007/978-1-62703-568-2_11  0.628
2013 Wang J, Nayak S, Koch K, Ming R. Carbon partitioning in sugarcane (Saccharum species). Frontiers in Plant Science. 4: 201. PMID 23785381 DOI: 10.3389/Fpls.2013.00201  0.314
2013 Bihmidine S, Hunter CT, Johns CE, Koch KE, Braun DM. Regulation of assimilate import into sink organs: update on molecular drivers of sink strength. Frontiers in Plant Science. 4: 177. PMID 23761804 DOI: 10.3389/Fpls.2013.00177  0.386
2012 Guan JC, Koch KE, Suzuki M, Wu S, Latshaw S, Petruff T, Goulet C, Klee HJ, McCarty DR. Diverse roles of strigolactone signaling in maize architecture and the uncoupling of a branching-specific subnetwork. Plant Physiology. 160: 1303-17. PMID 22961131 DOI: 10.1104/Pp.112.204503  0.647
2012 Hunter CT, Kirienko DH, Sylvester AW, Peter GF, McCarty DR, Koch KE. Cellulose Synthase-Like D1 is integral to normal cell division, expansion, and leaf development in maize. Plant Physiology. 158: 708-24. PMID 22123901 DOI: 10.1104/Pp.111.188466  0.611
2012 Geiger DR, Koch KE, Shieh WJ. Effect of environmental factors on whole plant assimilate partitioning and associated gene expression. Journal of Experimental Botany. 1229-38. PMID 21245254 DOI: 10.1093/Jxb/47.Special_Issue.1229  0.345
2011 Cannon EK, Birkett SM, Braun BL, Kodavali S, Jennewein DM, Yilmaz A, Antonescu V, Antonescu C, Harper LC, Gardiner JM, Schaeffer ML, Campbell DA, Andorf CM, Andorf D, Lisch D, Koch KE, et al. POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data. International Journal of Plant Genomics. 2011: 923035. PMID 22253616 DOI: 10.1155/2011/923035  0.604
2010 Duke ER, McCarty DR, Koch KE. Organ-specific invertase deficiency in the primary root of an inbred maize line. Plant Physiology. 97: 523-7. PMID 16668430 DOI: 10.1104/Pp.97.2.523  0.623
2010 Koch KE, Avigne WT. Postphloem, nonvascular transfer in citrus: kinetics, metabolism, and sugar gradients. Plant Physiology. 93: 1405-16. PMID 16667632 DOI: 10.1104/Pp.93.4.1405  0.307
2010 Lowell CA, Tomlinson PT, Koch KE. Sucrose-metabolizing enzymes in transport tissues and adjacent sink structures in developing citrus fruit. Plant Physiology. 90: 1394-402. PMID 16666942 DOI: 10.1104/Pp.90.4.1394  0.312
2010 Koch KE, Johnson CR. Photosynthate partitioning in split-root citrus seedlings with mycorrhizal and nonmycorrhizal root systems. Plant Physiology. 75: 26-30. PMID 16663589 DOI: 10.1104/Pp.75.1.26  0.332
2009 Penning BW, Hunter CT, Tayengwa R, Eveland AL, Dugard CK, Olek AT, Vermerris W, Koch KE, McCarty DR, Davis MF, Thomas SR, McCann MC, Carpita NC. Genetic resources for maize cell wall biology. Plant Physiology. 151: 1703-28. PMID 19926802 DOI: 10.1104/Pp.109.136804  0.677
2009 de Sousa SM, Rosselli LK, Kiyota E, da Silva JC, Souza GHMF, Peroni LA, Stach-Machado DR, Eberlin MN, Souza AP, Koch KE, Arruda P, Torriani IL, Yunes JA. Structural and kinetic characterization of a maize aldose reductase Plant Physiology and Biochemistry. 47: 98-104. PMID 19056286 DOI: 10.1016/J.Plaphy.2008.10.009  0.751
2008 Suzuki M, Latshaw S, Sato Y, Settles AM, Koch KE, Hannah LC, Kojima M, Sakakibara H, McCarty DR. The Maize Viviparous8 locus, encoding a putative ALTERED MERISTEM PROGRAM1-like peptidase, regulates abscisic acid accumulation and coordinates embryo and endosperm development. Plant Physiology. 146: 1193-206. PMID 18203869 DOI: 10.1104/Pp.107.114108  0.663
2008 Eveland AL, McCarty DR, Koch KE. Transcript profiling by 3'-untranslated region sequencing resolves expression of gene families. Plant Physiology. 146: 32-44. PMID 18024554 DOI: 10.1104/Pp.107.108597  0.657
2007 Huang LF, Bocock PN, Davis JM, Koch KE. Regulation of invertase: a 'suite' of transcriptional and post-transcriptional mechanisms. Functional Plant Biology : Fpb. 34: 499-507. PMID 32689379 DOI: 10.1071/Fp06227  0.395
2007 Settles AM, Holding DR, Tan BC, Latshaw SP, Liu J, Suzuki M, Li L, O'Brien BA, Fajardo DS, Wroclawska E, Tseung CW, Lai J, Hunter CT, Avigne WT, Baier J, ... Koch KE, et al. Sequence-indexed mutations in maize using the UniformMu transposon-tagging population. Bmc Genomics. 8: 116. PMID 17490480 DOI: 10.1186/1471-2164-8-116  0.636
2006 Kohorn BD, Kobayashi M, Johansen S, Riese J, Huang LF, Koch K, Fu S, Dotson A, Byers N. An Arabidopsis cell wall-associated kinase required for invertase activity and cell growth. The Plant Journal : For Cell and Molecular Biology. 46: 307-16. PMID 16623892 DOI: 10.1111/J.1365-313X.2006.02695.X  0.319
2005 McCarty DR, Settles AM, Suzuki M, Tan BC, Latshaw S, Porch T, Robin K, Baier J, Avigne W, Lai J, Messing J, Koch KE, Hannah LC. Steady-state transposon mutagenesis in inbred maize. The Plant Journal : For Cell and Molecular Biology. 44: 52-61. PMID 16167895 DOI: 10.1111/J.1365-313X.2005.02509.X  0.658
2005 Yong W, Link B, O'Malley R, Tewari J, Hunter CT, Lu CA, Li X, Bleecker AB, Koch KE, McCann MC, McCarty DR, Patterson SE, Reiter WD, Staiger C, Thomas SR, et al. Genomics of plant cell wall biogenesis. Planta. 221: 747-51. PMID 15981004 DOI: 10.1007/S00425-005-1563-Z  0.642
2004 Koch K. Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant development. Current Opinion in Plant Biology. 7: 235-46. PMID 15134743 DOI: 10.1016/J.Pbi.2004.03.014  0.385
2003 Andersen MN, Asch F, Wu Y, Jensen CR, Naested H, Mogensen VO, Koch KE. Soluble invertase expression is an early target of drought stress during the critical, abortion-sensitive phase of young ovary development in maize. Plant Physiology. 130: 591-604. PMID 12376627 DOI: 10.1104/Pp.005637  0.313
2002 Koch KE, Zeng Y. Molecular Approaches to Altered C Partitioning: Genes for Sucrose Metabolism Journal of the American Society For Horticultural Science. 127: 474-483. DOI: 10.21273/Jashs.127.4.474  0.316
2000 Koch KE, Ying Z, Wu Y, Avigne WT. Multiple paths of sugar-sensing and a sugar/oxygen overlap for genes of sucrose and ethanol metabolism. Journal of Experimental Botany. 417-27. PMID 10938850 DOI: 10.1093/Jexbot/51.Suppl_1.417  0.325
1999 Zeng Y, Wu Y, Avigne WT, Koch KE. Rapid Repression of Maize Invertases by Low Oxygen. Invertase/Sucrose Synthase Balance, Sugar Signaling Potential, and Seedling Survival Plant Physiology. 121: 599-608. DOI: 10.1104/Pp.121.2.599  0.348
1998 Zeng Y, Wu Y, Avigne WT, Koch KE. Differential regulation of sugar-sensitive sucrose synthases by hypoxia and anoxia indicate complementary transcriptional and posttranscriptional responses Plant Physiology. 116: 1573-1583. PMID 9536076 DOI: 10.1104/Pp.116.4.1573  0.367
1996 Koch KE, Wu Y, Xu J. Sugar and metabolic regulation of genes for sucrose metabolism: potential influence of maize sucrose synthase and soluble invertase responses on carbon partitioning and sugar sensing Journal of Experimental Botany. 47: 1179-1185. PMID 21245246 DOI: 10.1093/Jxb/47.Special_Issue.1179  0.416
1995 Xu J, Pemberton GH, Almira EC, McCarty DR, Koch KE. The Ivr 1 gene for invertase in maize. Plant Physiology. 108: 1293-4. PMID 7630946 DOI: 10.1104/Pp.108.3.1293  0.615
1995 Wen I, Sherman W, Koch K. Heritable Pleiotropic Effects of the Nectarine Mutant from Peach Journal of the American Society For Horticultural Science. 120: 721-725. DOI: 10.21273/Jashs.120.5.721  0.328
1994 Darnell RL, Cano-Medrano R, Koch KE, Avery ML. Differences in sucrose metabolism relative to accumulation of bird-deterrent sucrose levels in fruits of wild and domestic Vaccinium species Physiologia Plantarum. 92: 336-342. DOI: 10.1111/J.1399-3054.1994.Tb05345.X  0.302
1993 Nolte KD, Koch KE. Companion-Cell Specific Localization of Sucrose Synthase in Zones of Phloem Loading and Unloading Plant Physiology. 101: 899-905. DOI: 10.1104/Pp.101.3.899  0.316
1992 Williamson J, Castle W, Koch K. Growth and 14C-Photosynthate Allocation in Citrus Nursery Trees Subjected to One of Three Bud-forcing Methods Journal of the American Society For Horticultural Science. 117: 37-40. DOI: 10.21273/Jashs.117.1.37  0.32
1990 Yen C, Koch KE. Developmental Changes in Translocation and Localization of 14C-labeled Assimilates in Grapefruit: Light and Dark CO2 Fixation by Leaves and Fruit Journal of the American Society For Horticultural Science. 115: 815-819. DOI: 10.21273/Jashs.115.5.815  0.314
1990 Williamson JG, Koch KE, Castle WS. CITRUS ROOTSTOCK SHOOTS ENHANCE SCION GROWTH AFTER BUD FORCING Hortscience. 25: 1152d-1152. DOI: 10.21273/Hortsci.25.9.1152D  0.32
1988 Douds DD, Johnson CR, Koch KE. Carbon Cost of the Fungal Symbiont Relative to Net Leaf P Accumulation in a Split-Root VA Mycorrhizal Symbiosis Plant Physiology. 86: 491-496. DOI: 10.1104/Pp.86.2.491  0.339
1986 Koch KE, Jones PH, Avigne WT, Allen LH. Growth, dry matter partitioning, and diurnal activities of RuBP carboxylase in citrus seedlings maintained at two levels of CO2 Physiologia Plantarum. 67: 477-484. DOI: 10.1111/J.1399-3054.1986.Tb05766.X  0.308
1984 Koch KE, Schrader LE. C-Photosynthate Partitioning and Translocation in Soybeans during Reproductive Development. Plant Physiology. 75: 1040-3. PMID 16663730 DOI: 10.1104/Pp.75.4.1040  0.594
1982 Koch KE, Tsui CL, Schrader LE, Nelson OE. Source-sink relations in maize mutants with starch-deficient endosperms. Plant Physiology. 70: 322-5. PMID 16662473 DOI: 10.1104/Pp.70.1.322  0.642
1982 Koch KE, Kennedy RA. Crassulacean Acid Metabolism in the Succulent C(4) Dicot, Portulaca oleracea L Under Natural Environmental Conditions. Plant Physiology. 69: 757-61. PMID 16662291 DOI: 10.1104/Pp.69.4.757  0.337
1980 Koch K, Kennedy RA. Characteristics of Crassulacean Acid Metabolism in the Succulent C(4) Dicot, Portulaca oleracea L. Plant Physiology. 65: 193-7. PMID 16661159 DOI: 10.1104/Pp.65.2.193  0.324
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