| Year |
Citation |
Score |
| 2020 |
Liu Y, Yang T, Zhang B, Williams T, Lin YT, Li L, Zhou Y, Lu W, Kim SH, Chen LQ, Bernholc J, Wang Q. Structural Insight in the Interfacial Effect in Ferroelectric Polymer Nanocomposites. Advanced Materials (Deerfield Beach, Fla.). e2005431. PMID 33150671 DOI: 10.1002/adma.202005431 |
0.485 |
|
| 2020 |
Liu Y, Zhang B, Xu W, Haibibu A, Han Z, Lu W, Bernholc J, Wang Q. Chirality-induced relaxor properties in ferroelectric polymers. Nature Materials. PMID 32601482 DOI: 10.1038/S41563-020-0724-6 |
0.523 |
|
| 2020 |
Kennedy JJ, Chowdhury S, Savage SR, Hou X, Huntoon CJ, Ivey RG, Yu Q, Lin C, Huang D, Zhao L, Voytovich UJ, Schoenherr RM, Shire Z, Skates SJ, Whiteaker JR, ... ... Zhang B, et al. Abstract PR02: Proteogenomic approach to identify mechanisms of platinum refractoriness in high-grade serous ovarian cancers Clinical Cancer Research. 26. DOI: 10.1158/1557-3265.Ovca19-Pr02 |
0.356 |
|
| 2020 |
Satpathy S, Jaehnig E, Karsten K, Kim B, Saltzman A, Chan D, Holloway K, Anurag M, Huang C, Singh P, Gao A, Namai N, Dou Y, Wen B, Vasaikar S, ... ... Zhang B, et al. Abstract GS2-05: Microscaled proteogenomic methods for precision oncology Cancer Research. 80. DOI: 10.1158/1538-7445.Sabcs19-Gs2-05 |
0.376 |
|
| 2020 |
Kawaler EA, Dou Y, Zhou DC, Gritsenko MA, Rodland KD, Ding L, Zhang B, Liu T, Fenyö D. Abstract 6580: Proteogenomic characterization of endometrial carcinoma Cancer Research. 80: 6580-6580. DOI: 10.1158/1538-7445.Am2020-6580 |
0.386 |
|
| 2020 |
Jaehnig EJ, Anurag M, Lei JT, Zhang B. Abstract 5467: Outlier analysis to identify determinants of therapeutic resistance in breast cancer Cancer Research. 80: 5467-5467. DOI: 10.1158/1538-7445.Am2020-5467 |
0.35 |
|
| 2020 |
Lei JT, Jaehnig E, Zhang B. Abstract 4385: Proteogenomics-driven synthetic lethality discovery to predict targetable protein dependencies induced by somatic deletions Cancer Research. 80: 4385-4385. DOI: 10.1158/1538-7445.Am2020-4385 |
0.383 |
|
| 2019 |
Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, ... ... Zhang B, et al. Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma. Cell. 179: 964-983.e31. PMID 31675502 DOI: 10.1016/J.Cell.2019.10.007 |
0.321 |
|
| 2019 |
Sato S, Vasaikar S, Eskaros A, Kim Y, Lewis JS, Zhang B, Zijlstra A, Weaver AM. EPHB2 carried on small extracellular vesicles induces tumor angiogenesis via activation of ephrin reverse signaling. Jci Insight. PMID 31661464 DOI: 10.1172/Jci.Insight.132447 |
0.306 |
|
| 2019 |
Thangavel H, Angelis C, Vasaikar S, Bhat R, Jolly MK, Nagi C, Creighton CJ, Chen F, Dobrolecki LE, George JT, Kumar T, Abdulkareem NM, Mao S, Nardone A, Rimawi M, ... ... Zhang B, et al. A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. Journal of Clinical Medicine. 8. PMID 31652963 DOI: 10.3390/Jcm8111772 |
0.335 |
|
| 2019 |
Savage SR, Shi Z, Liao Y, Zhang B. Graph algorithms for condensing and consolidating gene set analysis results. Molecular & Cellular Proteomics : McP. PMID 31142576 DOI: 10.1074/Mcp.Tir118.001263 |
0.315 |
|
| 2019 |
Vasaikar S, Huang C, Wang X, Petyuk VA, Savage SR, Wen B, Dou Y, Zhang Y, Shi Z, Arshad OA, Gritsenko MA, Zimmerman LJ, McDermott JE, Clauss TR, Moore RJ, ... ... Zhang B, et al. Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities. Cell. PMID 31031003 DOI: 10.1016/J.Cell.2019.03.030 |
0.35 |
|
| 2019 |
Wen B, Wang X, Zhang B. PepQuery enables fast, accurate, and convenient proteomic validation of novel genomic alterations. Genome Research. PMID 30610011 DOI: 10.1101/Gr.235028.118 |
0.335 |
|
| 2019 |
Bhat R, Qin L, Angelis CD, Vasaikar S, Thangavel H, AbdulKareem N, Zhang B, Schiff R, Trivedi MV. Abstract 3044: The role of GPR110 in tumorigenicity, tumor cell dissemination, and cell cycle regulation in HER2+ breast cancer Cancer Research. 79: 3044-3044. DOI: 10.1158/1538-7445.Sabcs18-3044 |
0.33 |
|
| 2019 |
Cho KC, Hruban R, Zhang H, Huang C, Zhang B, Zhou DC, Ding L, Boja E. Abstract A60: Integrated proteogenomic characterization of pancreatic ductal adenocarcinoma Cancer Research. 79. DOI: 10.1158/1538-7445.Panca19-A60 |
0.371 |
|
| 2019 |
Zhang B, Vasaikar S, Huang C, Wang X, Petyuk VA, Savage SR, Wen B, Dou Y, Zhang Y, Shi Z, Arshad OA, Gritsenko MA, Zimmerman LJ, McDermott JE, Clauss TR, et al. Abstract LB-006: Proteogenomic characterization of human colon cancer reveals new therapeutic opportunities Cancer Research. 79. DOI: 10.1158/1538-7445.Am2019-Lb-006 |
0.379 |
|
| 2019 |
Vasaikar S, Straub P, Wang J, Zhang B. Abstract 5112: LinkedOmics: Analyzing multi-omics data within and across 32 cancer types Cancer Research. 79: 5112-5112. DOI: 10.1158/1538-7445.Am2019-5112 |
0.385 |
|
| 2019 |
Liu Y, Zhang B, Haibibu A, Xu W, Han Z, Lu W, Bernholc J, Wang Q. Insights into the Morphotropic Phase Boundary in Ferroelectric Polymers from the Molecular Perspective Journal of Physical Chemistry C. 123: 8727-8730. DOI: 10.1021/Acs.Jpcc.9B01220 |
0.486 |
|
| 2018 |
Zhang B, Whiteaker JR, Hoofnagle AN, Baird GS, Rodland KD, Paulovich AG. Clinical potential of mass spectrometry-based proteogenomics. Nature Reviews. Clinical Oncology. PMID 30487530 DOI: 10.1038/S41571-018-0135-7 |
0.331 |
|
| 2018 |
Liu Y, Aziguli H, Zhang B, Xu W, Lu W, Bernholc J, Wang Q. Ferroelectric polymers exhibiting behaviour reminiscent of a morphotropic phase boundary. Nature. 562: 96-100. PMID 30283102 DOI: 10.1038/S41586-018-0550-Z |
0.488 |
|
| 2018 |
Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, ... ... Zhang B, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576 |
0.347 |
|
| 2018 |
Menschaert G, Wang X, Jones AR, Ghali F, Fenyö D, Olexiouk V, Zhang B, Deutsch EW, Ternent T, Vizcaíno JA. The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data. Genome Biology. 19: 12. PMID 29386051 DOI: 10.1186/S13059-017-1377-X |
0.312 |
|
| 2017 |
Vasaikar SV, Straub P, Wang J, Zhang B. LinkedOmics: analyzing multi-omics data within and across 32 cancer types. Nucleic Acids Research. PMID 29136207 DOI: 10.1093/Nar/Gkx1090 |
0.358 |
|
| 2017 |
Wang J, Mouradov D, Wang X, Jorissen RN, Chambers MC, Zimmerman LJ, Vasaikar S, Love CG, Li S, Lowes K, Leuchowius KJ, Jousset H, Weinstock J, Yau C, Mariadason J, ... ... Zhang B, et al. Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity. Gastroenterology. PMID 28625833 DOI: 10.1053/J.Gastro.2017.06.008 |
0.304 |
|
| 2017 |
Wang J, Vasaikar S, Shi Z, Greer M, Zhang B. WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit. Nucleic Acids Research. PMID 28472511 DOI: 10.1093/Nar/Gkx356 |
0.342 |
|
| 2017 |
Ruggles KV, Krug K, Wang X, Clauser KR, Wang J, Payne SH, Fenyö D, Zhang B, Mani DR. Methods, tools and current perspectives in proteogenomics. Molecular & Cellular Proteomics : McP. PMID 28456751 DOI: 10.1074/Mcp.Mr117.000024 |
0.348 |
|
| 2017 |
Castellanos J, Liu Q, Beauchamp RD, Zhang B. Predicting colorectal cancer recurrence by utilizing multiple-view multiple-learner supervised learning. Journal of Clinical Oncology. 35: 635-635. DOI: 10.1200/Jco.2017.35.4_Suppl.635 |
0.347 |
|
| 2017 |
Madar IH, Lee W, Wang X, Ko SI, Kim H, Mun DG, Zhang B, Paek E, Lee S. Comprehensive and sensitive proteogenomics data analysis strategy based on complementary multi-stage database search International Journal of Mass Spectrometry. 427: 11-19. DOI: 10.1016/J.Ijms.2017.08.015 |
0.324 |
|
| 2016 |
Zhang M, Wang B, Xu J, Wang X, Xie L, Zhang B, Li Y, Li J. CanProVar 2.0: An Updated Database of Human Cancer Proteome Variation. Journal of Proteome Research. PMID 27977206 DOI: 10.1021/Acs.Jproteome.6B00505 |
0.368 |
|
| 2016 |
Dou Y, Cha DJ, Franklin JL, Higginbotham JN, Jeppesen DK, Weaver AM, Prasad N, Levy S, Coffey RJ, Patton JG, Zhang B. Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes. Scientific Reports. 6: 37982. PMID 27892494 DOI: 10.1038/Srep37982 |
0.301 |
|
| 2016 |
Wang J, Ma Z, Carr SA, Mertins P, Zhang H, Zhang Z, Chan DW, Ellis MJ, Townsend RR, Smith RD, McDermott JE, Chen X, Paulovich AG, Boja ES, Mesri M, ... ... Zhang B, et al. Proteome profiling outperforms transcriptome profiling for co-expression based gene function prediction. Molecular & Cellular Proteomics : McP. PMID 27836980 DOI: 10.1074/Mcp.M116.060301 |
0.379 |
|
| 2016 |
Zhang H, Liu T, Zhang Z, Payne SH, Zhang B, McDermott JE, Zhou JY, Petyuk VA, Chen L, Ray D, Sun S, Yang F, Chen L, Wang J, Shah P, ... ... Zhang B, et al. Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer. Cell. PMID 27372738 DOI: 10.1016/J.Cell.2016.05.069 |
0.371 |
|
| 2016 |
Mertins P, Mani DR, Ruggles KV, Gillette MA, Clauser KR, Wang P, Wang X, Qiao JW, Cao S, Petralia F, Kawaler E, Mundt F, Krug K, Tu Z, Lei JT, ... ... Zhang B, et al. Proteogenomics connects somatic mutations to signalling in breast cancer. Nature. 534: 55-62. PMID 27251275 DOI: 10.1038/Nature18003 |
0.335 |
|
| 2016 |
Mertins P, Mani, Ruggles K, Gillette M, Clauser K, Wang P, Wang X, Qiao J, Cao S, Petralia F, Mundt F, Tu Z, Lei J, Gatza M, Wilkerson M, ... ... Zhang B, et al. Abstract IA29: Proteogenomic and phosphoproteomic analysis of breast cancer Molecular Cancer Research. 14. DOI: 10.1158/1557-3125.Advbc15-Ia29 |
0.37 |
|
| 2015 |
Liu Q, Zhang B. Integrative omics analysis reveals post-transcriptionally enhanced protective host response in colorectal cancers with microsatellite instability. Journal of Proteome Research. PMID 26680540 DOI: 10.1021/Acs.Jproteome.5B00847 |
0.326 |
|
| 2015 |
Wang X, Slebos RJ, Chambers MC, Tabb DL, Liebler DC, Zhang B. proBAMsuite, a bioinformatics framework for genome-based representation and analysis of proteomics data. Molecular & Cellular Proteomics : McP. PMID 26657539 DOI: 10.1074/Mcp.M115.052860 |
0.345 |
|
| 2015 |
Qian J, Zou Y, Wang J, Zhang B, Massion PP. Global gene expression profiling reveals a suppressed immune response pathway associated with 3q amplification in squamous carcinoma of the lung. Genomics Data. 5: 272-4. PMID 26484266 DOI: 10.1016/J.Gdata.2015.06.014 |
0.321 |
|
| 2015 |
Abraham PE, Wang X, Ranjan P, Nookaew I, Zhang B, Tuskan GA, Hettich RL. Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa. Journal of Proteome Research. PMID 26483142 DOI: 10.1021/Acs.Jproteome.5B00823 |
0.328 |
|
| 2015 |
Hu Z, Scott HS, Qin G, Zheng G, Chu X, Xie L, Adelson DL, Oftedal BE, Venugopal P, Babic M, Hahn CN, Zhang B, Wang X, Li N, Wei C. Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and Proteomics. Scientific Reports. 5: 10940. PMID 26156868 DOI: 10.1038/Srep10940 |
0.336 |
|
| 2015 |
Slebos RJ, Wang X, Wang X, Zhang B, Tabb DL, Liebler DC. Proteomic analysis of colon and rectal carcinoma using standard and customized databases. Scientific Data. 2: 150022. PMID 26110064 DOI: 10.1038/Sdata.2015.22 |
0.345 |
|
| 2015 |
French CL, Ye F, Revetta F, Zhang B, Coffey RJ, Washington MK, Deane NG, Beauchamp RD, Weaver AM. Linking patient outcome to high throughput protein expression data identifies novel regulators of colorectal adenocarcinoma aggressiveness. F1000research. 4: 99. PMID 26097693 DOI: 10.12688/F1000Research.6388.1 |
0.377 |
|
| 2015 |
Sun H, Chen C, Lian B, Zhang M, Wang X, Zhang B, Li Y, Yang P, Xie L. Identification of HPV integration and gene mutation in HeLa cell line by integrated analysis of RNA-Seq and MS/MS data. Journal of Proteome Research. 14: 1678-86. PMID 25698088 DOI: 10.1021/Pr500944C |
0.327 |
|
| 2015 |
Zhu J, Shi Z, Wang J, Zhang B. Empowering biologists with multi-omics data: colorectal cancer as a paradigm. Bioinformatics (Oxford, England). 31: 1436-43. PMID 25527095 DOI: 10.1093/Bioinformatics/Btu834 |
0.338 |
|
| 2015 |
Mertins P, Mani, Clauser K, Gillette M, Wang P, Qiao J, Fenyo D, Ruggles K, Davies S, Zhang B, Gatza M, Wang S, Yan P, Lin C, McLellan M, et al. Abstract SY44-02: Proteogenomic and phosphoproteomic analysis of breast cancer Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Sy44-02 |
0.36 |
|
| 2014 |
Tripathi MK, Deane NG, Zhu J, An H, Mima S, Wang X, Padmanabhan S, Shi Z, Prodduturi N, Ciombor KK, Chen X, Washington MK, Zhang B, Beauchamp RD. Nuclear factor of activated T-cell activity is associated with metastatic capacity in colon cancer. Cancer Research. 74: 6947-57. PMID 25320007 DOI: 10.1158/0008-5472.Can-14-1592 |
0.347 |
|
| 2014 |
Wang X, Liu Q, Zhang B. Leveraging the complementary nature of RNA-Seq and shotgun proteomics data. Proteomics. 14: 2676-87. PMID 25266668 DOI: 10.1002/Pmic.201400184 |
0.312 |
|
| 2014 |
Zhang B, Wang J, Wang X, Zhu J, Liu Q, Shi Z, Chambers MC, Zimmerman LJ, Shaddox KF, Kim S, Davies SR, Wang S, Wang P, Kinsinger CR, Rivers RC, et al. Proteogenomic characterization of human colon and rectal cancer. Nature. 513: 382-7. PMID 25043054 DOI: 10.1038/Nature13438 |
0.379 |
|
| 2014 |
Wang X, Zhang B. Integrating genomic, transcriptomic, and interactome data to improve Peptide and protein identification in shotgun proteomics. Journal of Proteome Research. 13: 2715-23. PMID 24792918 DOI: 10.1021/Pr500194T |
0.354 |
|
| 2014 |
Codreanu SG, Ullery JC, Zhu J, Tallman KA, Beavers WN, Porter NA, Marnett LJ, Zhang B, Liebler DC. Alkylation damage by lipid electrophiles targets functional protein systems. Molecular & Cellular Proteomics : McP. 13: 849-59. PMID 24429493 DOI: 10.1074/Mcp.M113.032953 |
0.303 |
|
| 2014 |
Ye R, Carneiro AM, Han Q, Airey D, Sanders-Bush E, Zhang B, Lu L, Williams R, Blakely RD. Quantitative trait loci mapping and gene network analysis implicate protocadherin-15 as a determinant of brain serotonin transporter expression. Genes, Brain, and Behavior. 13: 261-75. PMID 24405699 DOI: 10.1111/Gbb.12119 |
0.315 |
|
| 2014 |
Halvey PJ, Wang X, Wang J, Bhat AA, Dhawan P, Li M, Zhang B, Liebler DC, Slebos RJ. Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair. Cancer Research. 74: 387-97. PMID 24247723 DOI: 10.1158/0008-5472.Can-13-2488 |
0.377 |
|
| 2014 |
Kirov S, Ji R, Wang J, Zhang B. Functional annotation of differentially regulated gene set using WebGestalt: a gene set predictive of response to ipilimumab in tumor biopsies. Methods of Molecular Biology. 1101: 31-42. PMID 24233776 DOI: 10.1007/978-1-62703-721-1_3 |
0.325 |
|
| 2013 |
Zhu J, Wang J, Shi Z, Franklin JL, Deane NG, Coffey RJ, Beauchamp RD, Zhang B. Deciphering genomic alterations in colorectal cancer through transcriptional subtype-based network analysis. Plos One. 8: e79282. PMID 24260186 DOI: 10.1371/Journal.Pone.0079282 |
0.34 |
|
| 2013 |
Wang X, Zhang B. customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search Bioinformatics. 29: 3235-3237. PMID 24058055 DOI: 10.1093/Bioinformatics/Btt543 |
0.339 |
|
| 2013 |
Liu Q, Ullery J, Zhu J, Liebler DC, Marnett LJ, Zhang B. RNA-seq data analysis at the gene and CDS levels provides a comprehensive view of transcriptome responses induced by 4-hydroxynonenal. Molecular Biosystems. 9: 3036-46. PMID 24056865 DOI: 10.1039/C3Mb70114J |
0.305 |
|
| 2013 |
Wang J, Qian J, Hoeksema MD, Zou Y, Espinosa AV, Rahman SM, Zhang B, Massion PP. Integrative genomics analysis identifies candidate drivers at 3q26-29 amplicon in squamous cell carcinoma of the lung. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 19: 5580-90. PMID 23908357 DOI: 10.1158/1078-0432.Ccr-13-0594 |
0.317 |
|
| 2013 |
Chen YY, Chambers MC, Li M, Ham AJ, Turner JL, Zhang B, Tabb DL. IDPQuantify: combining precursor intensity with spectral counts for protein and peptide quantification. Journal of Proteome Research. 12: 4111-21. PMID 23879310 DOI: 10.1021/Pr400438Q |
0.312 |
|
| 2013 |
Shi Z, Wang J, Zhang B. NetGestalt: integrating multidimensional omics data over biological networks. Nature Methods. 10: 597-8. PMID 23807191 DOI: 10.1038/Nmeth.2517 |
0.336 |
|
| 2013 |
Wang J, Duncan D, Shi Z, Zhang B. WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013. Nucleic Acids Research. 41: W77-83. PMID 23703215 DOI: 10.1093/Nar/Gkt439 |
0.341 |
|
| 2013 |
Ciombor KK, Deane NG, Lewis KB, Chen X, Zhang B, Washington MK, Shi C, Beauchamp RD. Colorectal cancer gene expression profiling using nanostring nCounter analysis. Journal of Clinical Oncology. 31: 3555-3555. DOI: 10.1200/Jco.2013.31.15_Suppl.3555 |
0.35 |
|
| 2013 |
Tripathi MK, Mima S, Shi Z, Prodduturi N, Jing Z, Ciombor KK, Chen X, Deane N, Beauchamp RD, Zhang B. Abstract B101: NFAT regulates a gene expression program associated with invasiveness and poor prognosis in colorectal cancer Cancer Research. 73. DOI: 10.1158/1538-7445.Tim2013-B101 |
0.345 |
|
| 2012 |
Sousa JF, Ham AJ, Whitwell C, Nam KT, Lee HJ, Yang HK, Kim WH, Zhang B, Li M, LaFleur B, Liebler DC, Goldenring JR. Proteomic profiling of paraffin-embedded samples identifies metaplasia-specific and early-stage gastric cancer biomarkers. The American Journal of Pathology. 181: 1560-72. PMID 22944598 DOI: 10.1016/J.Ajpath.2012.07.027 |
0.311 |
|
| 2012 |
Shi M, Beauchamp RD, Zhang B. A network-based gene expression signature informs prognosis and treatment for colorectal cancer patients. Plos One. 7: e41292. PMID 22844451 DOI: 10.1371/Journal.Pone.0041292 |
0.334 |
|
| 2012 |
Wang X, Slebos RJ, Wang D, Halvey PJ, Tabb DL, Liebler DC, Zhang B. Protein identification using customized protein sequence databases derived from RNA-Seq data. Journal of Proteome Research. 11: 1009-17. PMID 22103967 DOI: 10.1021/Pr200766Z |
0.348 |
|
| 2012 |
Halvey PJ, Zhang B, Coffey RJ, Liebler DC, Slebos RJC. Proteomic Consequences of a Single Gene Mutation in a Colorectal Cancer Model Journal of Proteome Research. 11: 1184-1195. PMID 22103262 DOI: 10.1021/Pr2009109 |
0.356 |
|
| 2012 |
Tripathi MK, Mima S, Freeman TJ, Weaver C, Deane NG, Zhang B, Beauchamp RD. Abstract 499: NFATc1 is a novel invasion promoter in colorectal cancer Cancer Research. 72: 499-499. DOI: 10.1158/1538-7445.Am2012-499 |
0.333 |
|
| 2012 |
Shi Z, Wang J, Zhang B. Abstract 3976: NetGestalt: A web application for the integration of multidimensional omics data within a network context Cancer Research. 72: 3976-3976. DOI: 10.1158/1538-7445.Am2012-3976 |
0.365 |
|
| 2011 |
Shi M, Zhang B. Semi-supervised learning improves gene expression-based prediction of cancer recurrence Bioinformatics. 27: 3017-3023. PMID 21893520 DOI: 10.1093/Bioinformatics/Btr502 |
0.323 |
|
| 2011 |
Zhang B, Shi Z, Duncan DT, Prodduturi N, Marnett LJ, Liebler DC. Relating protein adduction to gene expression changes: a systems approach. Molecular Biosystems. 7: 2118-27. PMID 21594272 DOI: 10.1039/C1Mb05014A |
0.36 |
|
| 2011 |
Lu H, Wang X, Pullen M, Guan H, Chen H, Sahu S, Zhang B, Chen H, Williams RW, Geisert EE, Lu L, Jablonski MM. Genetic dissection of the Gpnmb network in the eye. Investigative Ophthalmology & Visual Science. 52: 4132-42. PMID 21398278 DOI: 10.1167/Iovs.10-6493 |
0.316 |
|
| 2011 |
Li J, Su Z, Ma ZQ, Slebos RJ, Halvey P, Tabb DL, Liebler DC, Pao W, Zhang B. A bioinformatics workflow for variant peptide detection in shotgun proteomics. Molecular & Cellular Proteomics : McP. 10: M110.006536. PMID 21389108 DOI: 10.1074/Mcp.M110.006536 |
0.359 |
|
| 2011 |
Angel PM, Nusinow D, Brown CB, Violette K, Barnett JV, Zhang B, Baldwin HS, Caprioli RM. Networked-based characterization of extracellular matrix proteins from adult mouse pulmonary and aortic valves. Journal of Proteome Research. 10: 812-23. PMID 21133377 DOI: 10.1021/Pr1009806 |
0.301 |
|
| 2010 |
Shi Z, Derow CK, Zhang B. Co-expression module analysis reveals biological processes, genomic gain, and regulatory mechanisms associated with breast cancer progression. Bmc Systems Biology. 4: 74. PMID 20507583 DOI: 10.1186/1752-0509-4-74 |
0.351 |
|
| 2010 |
Li J, Duncan DT, Zhang B. CanProVar: A Human Cancer Proteome Variation Database Human Mutation. 31: 219-228. PMID 20052754 DOI: 10.1002/Humu.21176 |
0.359 |
|
| 2010 |
Smith JJ, Deane NG, Wu F, Merchant NB, Zhang B, Jiang A, Lu P, Johnson JC, Schmidt C, Bailey CE, Eschrich S, Kis C, Levy S, Washington MK, Heslin MJ, et al. Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer. Gastroenterology. 138: 958-68. PMID 19914252 DOI: 10.1053/J.Gastro.2009.11.005 |
0.309 |
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