| Year |
Citation |
Score |
| 2023 |
Núñez-Pons L, Cunning R, Nelson CE, Amend AS, Sogin EM, Gates R, Ritson-Williams R. Hawaiian coral holobionts reveal algal and prokaryotic host specificity, intraspecific variability in bleaching resistance, and common interspecific microbial consortia modulating thermal stress responses. The Science of the Total Environment. 889: 164040. PMID 37209745 DOI: 10.1016/j.scitotenv.2023.164040 |
0.344 |
|
| 2022 |
Drury C, Bean NK, Harris CI, Hancock JR, Huckeba J, H CM, Roach TNF, Quinn RA, Gates RD. Intrapopulation adaptive variance supports thermal tolerance in a reef-building coral. Communications Biology. 5: 486. PMID 35589814 DOI: 10.1038/s42003-022-03428-3 |
0.321 |
|
| 2022 |
Elahi R, Edmunds PJ, Gates RD, Kuffner IB, Barnes BB, Chollett I, Courtney TA, Guest JR, Lenz EA, Toth LT, Viehman TS, Williams ID. Scale dependence of coral reef oases and their environmental correlates. Ecological Applications : a Publication of the Ecological Society of America. e2651. PMID 35538862 DOI: 10.1002/eap.2651 |
0.74 |
|
| 2021 |
Barott KL, Huffmyer AS, Davidson JM, Lenz EA, Matsuda SB, Hancock JR, Innis T, Drury C, Putnam HM, Gates RD. Coral bleaching response is unaltered following acclimatization to reefs with distinct environmental conditions. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34050025 DOI: 10.1073/pnas.2025435118 |
0.767 |
|
| 2020 |
Putnam HM, Ritson-Williams R, Cruz JA, Davidson JM, Gates RD. Environmentally-induced parental or developmental conditioning influences coral offspring ecological performance. Scientific Reports. 10: 13664. PMID 32788607 DOI: 10.1038/S41598-020-70605-X |
0.586 |
|
| 2020 |
Kitchen RM, Piscetta M, de Souza MR, Lenz EA, Schar DWH, Gates RD, Wall CB. Symbiont transmission and reproductive mode influence responses of three Hawaiian coral larvae to elevated temperature and nutrients Coral Reefs. 39: 419-431. DOI: 10.1007/S00338-020-01905-X |
0.736 |
|
| 2019 |
Shumaker A, Putnam HM, Qiu H, Price DC, Zelzion E, Harel A, Wagner NE, Gates RD, Yoon HS, Bhattacharya D. Genome analysis of the rice coral Montipora capitata. Scientific Reports. 9: 2571. PMID 30796282 DOI: 10.1038/S41598-019-39274-3 |
0.589 |
|
| 2019 |
Price N, Muko S, Legendre L, Steneck R, van Oppen M, Albright R, Ang Jr P, Carpenter R, Chui A, Fan T, Gates R, Harii S, Kitano H, Kurihara H, Mitarai S, et al. Global biogeography of coral recruitment: tropical decline and subtropical increase Marine Ecology Progress Series. 621: 1-17. DOI: 10.3354/Meps12980 |
0.554 |
|
| 2019 |
Lebrec M, Stefanski S, Gates R, Acar S, Golbuu Y, Claudel-Rusin A, Kurihara H, Rehdanz K, Paugam-Baudoin D, Tsunoda T, Swarzenski PW. Ocean acidification impacts in select Pacific Basin coral reef ecosystems Regional Studies in Marine Science. 28: 100584. DOI: 10.1016/J.Rsma.2019.100584 |
0.425 |
|
| 2018 |
Gibbin EM, Krueger T, Putnam HM, Barott KL, Bodin J, Gates RD, Meibom A. Short-Term Thermal Acclimation Modifies the Metabolic Condition of the Coral Holobiont Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00010 |
0.59 |
|
| 2018 |
Guest JR, Edmunds PJ, Gates RD, Kuffner IB, Andersson AJ, Barnes BB, Chollett I, Courtney TA, Elahi R, Gross K, Lenz EA, Mitarai S, Mumby PJ, Nelson HR, Parker BA, et al. A framework for identifying and characterising coral reef “oases” against a backdrop of degradation Journal of Applied Ecology. 55: 2865-2875. DOI: 10.1111/1365-2664.13179 |
0.763 |
|
| 2018 |
Wall CB, Ricci CA, Foulds GE, Mydlarz LD, Gates RD, Putnam HM. The effects of environmental history and thermal stress on coral physiology and immunity Marine Biology. 165. DOI: 10.1007/S00227-018-3317-Z |
0.611 |
|
| 2017 |
Madin JS, Anderson KD, Andreasen MH, Bridge TCL, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Harmer AMT, Hoogenboom MO, Huang D, Keith SA, et al. Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 4: 170174. PMID 29206222 DOI: 10.1038/Sdata.2017.174 |
0.562 |
|
| 2017 |
Baghdasarian G, Osberg A, Mihora D, Putnam H, Gates RD, Edmunds PJ. Effects of Temperature and pCO2 on Population Regulation of Symbiodinium spp. in a Tropical Reef Coral. The Biological Bulletin. 232: 123-139. PMID 28654331 DOI: 10.1086/692718 |
0.684 |
|
| 2017 |
Cunning R, Gates RD, Edmunds PJ. Using high-throughput sequencing of ITS2 to describe Symbiodinium metacommunities in St. John, US Virgin Islands. Peerj. 5: e3472. PMID 28649474 DOI: 10.7717/Peerj.3472 |
0.544 |
|
| 2017 |
Qiu H, Zelzion E, Putnam HM, Gates RD, Wagner NE, Adams DK, Bhattacharya D. Discovery of SCORs: Anciently derived, highly conserved gene-associated repeats in stony corals. Genomics. PMID 28634029 DOI: 10.1016/J.Ygeno.2017.06.003 |
0.593 |
|
| 2017 |
Putnam HM, Barott KL, Ainsworth TD, Gates RD. The Vulnerability and Resilience of Reef-Building Corals. Current Biology : Cb. 27: R528-R540. PMID 28586690 DOI: 10.1016/J.Cub.2017.04.047 |
0.619 |
|
| 2017 |
Putnam HM, Adams DK, Zelzion E, Wagner NE, Qiu H, Mass T, Falkowski PG, Gates RD, Bhattacharya D. Divergent evolutionary histories of DNA markers in a Hawaiian population of the coral Montipora capitata. Peerj. 5: e3319. PMID 28533967 DOI: 10.7717/Peerj.3319 |
0.55 |
|
| 2017 |
Sogin EM, Putnam HM, Nelson CE, Anderson P, Gates RD. Correspondence of coral holobiont metabolome with symbiotic bacteria, archaea and Symbiodinium communities. Environmental Microbiology Reports. PMID 28464532 DOI: 10.1111/1758-2229.12541 |
0.597 |
|
| 2017 |
van Oppen MJ, Gates RD, Blackall LL, Cantin N, Chakravarti LJ, Chan WY, Cormick C, Crean A, Damjanovic K, Epstein H, Harrison PL, Jones TA, Miller M, Pears RJ, Peplow LM, et al. Shifting paradigms in restoration of the world's coral reefs. Global Change Biology. PMID 28247459 DOI: 10.1111/Gcb.13647 |
0.602 |
|
| 2016 |
Putnam HM, Davidson JM, Gates RD. Ocean acidification influences host DNA methylation and phenotypic plasticity in environmentally susceptible corals. Evolutionary Applications. 9: 1165-1178. PMID 27695524 DOI: 10.1111/Eva.12408 |
0.584 |
|
| 2016 |
Bhattacharya D, Agrawal S, Aranda M, Baumgarten S, Belcaid M, Drake JL, Erwin D, Foret S, Gates RD, Gruber DF, Kamel B, Lesser MP, Levy O, Liew YJ, MacManes M, et al. Comparative genomics explains the evolutionary success of reef-forming corals. Elife. 5. PMID 27218454 DOI: 10.7554/Elife.13288 |
0.608 |
|
| 2016 |
Mass T, Putnam HM, Drake JL, Zelzion E, Gates RD, Bhattacharya D, Falkowski PG. Temporal and spatial expression patterns of biomineralization proteins during early development in the stony coral Pocillopora damicornis. Proceedings. Biological Sciences / the Royal Society. 283. PMID 27122561 DOI: 10.1098/Rspb.2016.0322 |
0.544 |
|
| 2016 |
Madin JS, Anderson KD, Andreasen MH, Bridge TC, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Hoogenboom MO, Huang D, Keith SA, Kosnik MA, et al. The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 3: 160017. PMID 27023900 DOI: 10.1038/Sdata.2016.17 |
0.603 |
|
| 2016 |
Davies N, Field D, Gavaghan D, Holbrook SJ, Planes S, Troyer M, Bonsall M, Claudet J, Roderick G, Schmitt RJ, Zettler LA, Berteaux V, Bossin HC, Cabasse C, Collin A, ... ... Gates R, et al. Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium. Gigascience. 5: 14. PMID 26998258 DOI: 10.1186/S13742-016-0118-5 |
0.306 |
|
| 2016 |
Sogin EM, Putnam HM, Anderson PE, Gates RD. Metabolomic signatures of increases in temperature and ocean acidification from the reef-building coral, Pocillopora damicornis Metabolomics. 12. DOI: 10.1007/S11306-016-0987-8 |
0.619 |
|
| 2015 |
Cunning R, Yost DM, Guarinello ML, Putnam HM, Gates RD. Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa. Plos One. 10: e0145099. PMID 26713847 DOI: 10.1371/Journal.Pone.0145099 |
0.607 |
|
| 2015 |
Putnam HM, Gates RD. Preconditioning in the reef-building coral Pocillopora damicornis and the potential for trans-generational acclimatization in coral larvae under future climate change conditions. The Journal of Experimental Biology. 218: 2365-72. PMID 26246609 DOI: 10.1242/Jeb.123018 |
0.595 |
|
| 2015 |
Burns J, Delparte D, Gates RD, Takabayashi M. Integrating structure-from-motion photogrammetry with geospatial software as a novel technique for quantifying 3D ecological characteristics of coral reefs. Peerj. 3: e1077. PMID 26207190 DOI: 10.7717/Peerj.1077 |
0.308 |
|
| 2015 |
Pochon X, Forsman ZH, Spalding HL, Padilla-Gamiño JL, Smith CM, Gates RD. Depth specialization in mesophotic corals (Leptoseris spp.) and associated algal symbionts in Hawai'i. Royal Society Open Science. 2: 140351. PMID 26064599 DOI: 10.1098/Rsos.140351 |
0.384 |
|
| 2015 |
van Oppen MJ, Oliver JK, Putnam HM, Gates RD. Building coral reef resilience through assisted evolution. Proceedings of the National Academy of Sciences of the United States of America. 112: 2307-13. PMID 25646461 DOI: 10.1073/Pnas.1422301112 |
0.634 |
|
| 2015 |
Edmunds PJ, Steneck R, Albright R, Carpenter RC, Chui APY, Fan TY, Harii S, Kitano H, Kurihara H, Legendre L, Mitarai S, Muko S, Nozawa Y, Padilla-Gamino J, Price NN, ... ... Gates RD, et al. Geographic variation in long-term trajectories of change in coral recruitment: A global-to-local perspective Marine and Freshwater Research. 66: 609-622. DOI: 10.1071/Mf14139 |
0.511 |
|
| 2015 |
Gibbin EM, Putnam HM, Gates RD, Nitschke MR, Davy SK. Species-specific differences in thermal tolerance may define susceptibility to intracellular acidosis in reef corals Marine Biology. 162: 717-723. DOI: 10.1007/S00227-015-2617-9 |
0.601 |
|
| 2014 |
Edmunds PJ, Adjeroud M, Baskett ML, Baums IB, Budd AF, Carpenter RC, Fabina NS, Fan TY, Franklin EC, Gross K, Han X, Jacobson L, Klaus JS, McClanahan TR, O'Leary JK, ... ... Gates RD, et al. Persistence and change in community composition of reef corals through present, past, and future climates. Plos One. 9: e107525. PMID 25272143 DOI: 10.1371/Journal.Pone.0107525 |
0.721 |
|
| 2014 |
Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, ... ... Gates RD, et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. Plos Biology. 12: e1001889. PMID 24959919 DOI: 10.1371/Journal.Pbio.1001889 |
0.408 |
|
| 2014 |
Pochon X, Putnam HM, Gates RD. Multi-gene analysis of Symbiodinium dinoflagellates: a perspective on rarity, symbiosis, and evolution. Peerj. 2: e394. PMID 24883254 DOI: 10.7717/Peerj.394 |
0.579 |
|
| 2014 |
Padilla-Gamiño JL, Hédouin L, Waller RG, Smith D, Truong W, Gates RD. Sedimentation and the reproductive biology of the Hawaiian reef-building coral Montipora capitata. The Biological Bulletin. 226: 8-18. PMID 24648203 |
0.45 |
|
| 2014 |
Gibbin EM, Putnam HM, Davy SK, Gates RD. Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells. The Journal of Experimental Biology. 217: 1963-9. PMID 24625648 DOI: 10.1242/Jeb.099549 |
0.534 |
|
| 2014 |
Edmunds PJ, Pochon X, Levitan DR, Yost DM, Belcaid M, Putnam HM, Gates RD. Long-term changes in Symbiodinium communities in Orbicella annularis in St. John, US Virgin Islands Marine Ecology Progress Series. 506: 129-144. DOI: 10.3354/Meps10808 |
0.702 |
|
| 2014 |
Edmunds PJ, Burgess SC, Putnam HM, Baskett ML, Bramanti L, Fabina NS, Han X, Lesser MP, Madin JS, Wall CB, Yost DM, Gates RD. Evaluating the causal basis of ecological success within the scleractinia: an integral projection model approach Marine Biology. 161: 2719-2734. DOI: 10.1007/S00227-014-2547-Y |
0.711 |
|
| 2014 |
Pochon X, Gates RD, Vik D, Edmunds PJ. Molecular characterization of symbiotic algae (Symbiodinium spp.) in soritid foraminifera (Soritesorbiculus) and a scleractinian coral (Orbicella annularis) from St John, US Virgin Islands Marine Biology. DOI: 10.1007/s00227-014-2507-6 |
0.474 |
|
| 2013 |
Yost DM, Wang LH, Fan TY, Chen CS, Lee RW, Sogin E, Gates RD. Diversity in skeletal architecture influences biological heterogeneity and Symbiodinium habitat in corals. Zoology (Jena, Germany). 116: 262-9. PMID 23992772 DOI: 10.1016/J.Zool.2013.06.001 |
0.323 |
|
| 2013 |
Fabina NS, Putnam HM, Franklin EC, Stat M, Gates RD. Symbiotic specificity, association patterns, and function determine community responses to global changes: defining critical research areas for coral-Symbiodinium symbioses. Global Change Biology. 19: 3306-16. PMID 23847174 DOI: 10.1111/Gcb.12320 |
0.634 |
|
| 2013 |
Putnam HM, Mayfield AB, Fan TY, Chen CS, Gates RD. The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2 Marine Biology. 160: 2157-2173. DOI: 10.1007/S00227-012-2129-9 |
0.608 |
|
| 2012 |
Edmunds PJ, Putnam HM, Gates RD. Photophysiological consequences of vertical stratification of Symbiodinium in tissue of the coral Porites lutea. The Biological Bulletin. 223: 226-35. PMID 23111134 DOI: 10.1086/Bblv223N2P226 |
0.636 |
|
| 2012 |
Fabina NS, Putnam HM, Franklin EC, Stat M, Gates RD. Transmission mode predicts specificity and interaction patterns in coral-Symbiodinium networks. Plos One. 7: e44970. PMID 23028711 DOI: 10.1371/Journal.Pone.0044970 |
0.583 |
|
| 2012 |
Putnam HM, Stat M, Pochon X, Gates RD. Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals. Proceedings. Biological Sciences / the Royal Society. 279: 4352-61. PMID 22933373 DOI: 10.1098/Rspb.2012.1454 |
0.647 |
|
| 2012 |
Pochon X, Putnam HM, Burki F, Gates RD. Identifying and characterizing alternative molecular markers for the symbiotic and free-living dinoflagellate genus Symbiodinium. Plos One. 7: e29816. PMID 22238660 DOI: 10.1371/Journal.Pone.0029816 |
0.566 |
|
| 2012 |
Franklin EC, Stat M, Pochon X, Putnam HM, Gates RD. GeoSymbio: a hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses. Molecular Ecology Resources. 12: 369-73. PMID 22018222 DOI: 10.1111/J.1755-0998.2011.03081.X |
0.564 |
|
| 2010 |
Barshis DJ, Stillman JH, Gates RD, Toonen RJ, Smith LW, Birkeland C. Protein expression and genetic structure of the coral Porites lobata in an environmentally extreme Samoan back reef: does host genotype limit phenotypic plasticity? Molecular Ecology. 19: 1705-20. PMID 20345691 DOI: 10.1111/J.1365-294X.2010.04574.X |
0.314 |
|
| 2010 |
Hofmann GE, Barry JP, Edmunds PJ, Gates RD, Hutchins DA, Klinger T, Sewell MA. The effect of Ocean acidification on calcifying organisms in marine ecosystems: An organism-to-ecosystem perspective Annual Review of Ecology, Evolution, and Systematics. 41: 127-147. DOI: 10.1146/Annurev.Ecolsys.110308.120227 |
0.53 |
|
| 2010 |
Green DH, Edmunds PJ, Pochon X, Gates RD. The effects of substratum type on the growth, mortality, and photophysiology of juvenile corals in St. John, US Virgin Islands Journal of Experimental Marine Biology and Ecology. 384: 18-29. DOI: 10.1016/j.jembe.2009.12.008 |
0.437 |
|
| 2008 |
Edmunds PJ, Gates RD. Acclimatization in tropical reef corals Marine Ecology Progress Series. 361: 307-310. DOI: 10.3354/meps07556 |
0.546 |
|
| 2006 |
van Oppen MJ, Gates RD. Conservation genetics and the resilience of reef-building corals. Molecular Ecology. 15: 3863-83. PMID 17054489 DOI: 10.1111/j.1365-294X.2006.03026.x |
0.34 |
|
| 2006 |
Gleason DF, Edmunds PJ, Gates RD. Ultraviolet radiation effects on the behavior and recruitment of larvae from the reef coral Porites astreoides Marine Biology. 148: 503-512. DOI: 10.1007/s00227-005-0098-y |
0.429 |
|
| 2005 |
Edmunds PJ, Gates RD, Leggat W, Hoegh-Guldberg O, Allen-Requa L. The effect of temperature on the size and population density of dinoflagellates in larvae of the reef coral Porites astreoides Invertebrate Biology. 124: 185-193. DOI: 10.1111/j.1744-7410.2005.00018.x |
0.475 |
|
| 2004 |
Edmunds PJ, Gates RD. Size-dependent differences in the photophysiology of the reef coral Porites astreoides. The Biological Bulletin. 206: 61-4. PMID 15111360 |
0.458 |
|
| 2003 |
Edmunds PJ, Gates RD. Has Coral Bleaching Delayed Our Understanding of Fundamental Aspects of Coral-Dinoflagellate Symbioses? Bioscience. 53: 976-980. |
0.483 |
|
| 2003 |
Edmunds PJ, Gates RD, Gleason DF. The tissue composition of Montastraea franksi during a natural bleaching event in the Florida Keys Coral Reefs. 22: 54-62. |
0.434 |
|
| 2002 |
Edmunds PJ, Gates RD. Normalizing physiological data for scleractinian corals Coral Reefs. 21: 193-197. |
0.454 |
|
| 2001 |
Edmunds P, Gates R, Gleason D. The biology of larvae from the reef coral Porites astreoides, and their response to temperature disturbances Marine Biology. 139: 981-989. DOI: 10.1007/s002270100634 |
0.497 |
|
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