| Year |
Citation |
Score |
| 2025 |
Hincher MR, Carleton JP, Wheeler SJ, DelCogliano M, Mathis K, Tabima JF. Ubiquity and diversity of across amphibian species inhabiting an urbanization gradient. Mycologia. 1-13. PMID 40020154 DOI: 10.1080/00275514.2025.2455909 |
0.321 |
|
| 2022 |
Kronmiller BA, Feau N, Shen D, Tabima JF, Ali SS, Armitage AD, Arredondo FD, Bailey BA, Bollmann SR, Dale A, Harrison R, Hrywkiw K, Kasuga T, McDougal R, Nellist CF, et al. Comparative genomic analysis of 31 genomes reveal genome plasticity and horizontal gene transfer. Molecular Plant-Microbe Interactions : Mpmi. PMID 36306437 DOI: 10.1094/MPMI-06-22-0133-R |
0.424 |
|
| 2020 |
Tabima JF, Trautman IA, Chang Y, Wang Y, Mondo S, Kuo A, Salamov A, Grigoriev IV, Stajich JE, Spatafora JW. Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, . G3 (Bethesda, Md.). PMID 32727924 DOI: 10.1534/G3.120.401516 |
0.324 |
|
| 2020 |
Knaus BJ, Tabima JF, Shakya SK, Judelson HS, Grünwald NJ. Genome-Wide Increased Copy Number is Associated with Emergence of Dominant Clones of the Irish Potato Famine Pathogen Phytophthora infestans. Mbio. 11. PMID 32576669 DOI: 10.1128/Mbio.00326-20 |
0.428 |
|
| 2020 |
Weisberg AJ, Davis EW, Tabima J, Belcher MS, Miller M, Kuo CH, Loper JE, Grünwald NJ, Putnam ML, Chang JH. Unexpected conservation and global transmission of agrobacterial virulence plasmids. Science (New York, N.Y.). 368. PMID 32499412 DOI: 10.1126/Science.Aba5256 |
0.456 |
|
| 2020 |
Adams TM, Armitage AD, Sobczyk MK, Bates HJ, Tabima JF, Kronmiller BA, Tyler BM, Grünwald NJ, Dunwell JM, Nellist CF, Harrison RJ. Genomic Investigation of the Strawberry Pathogen Indicates Pathogenicity Is Associated With Transcriptional Variation in Three Key Races. Frontiers in Microbiology. 11: 490. PMID 32351458 DOI: 10.3389/Fmicb.2020.00490 |
0.436 |
|
| 2020 |
Keriö S, Daniels HA, Gómez-Gallego M, Tabima JF, Lenz RR, Søndreli KL, Grünwald NJ, Williams N, Mcdougal R, LeBoldus JM. From genomes to forest management – tackling invasive Phytophthora species in the era of genomics Canadian Journal of Plant Pathology-Revue Canadienne De Phytopathologie. 42: 1-29. DOI: 10.1080/07060661.2019.1626910 |
0.353 |
|
| 2019 |
Tabima JF, Sondreli K, Kerio S, Feau N, Sakalidis ML, Hamelin R, Leboldus J. Population genomic analyses reveal connectivity via human-mediated transport across Populus plantations in North America and an undescribed sub-population of Sphaerulina musiva. Molecular Plant-Microbe Interactions : Mpmi. PMID 31593527 DOI: 10.1094/Mpmi-05-19-0131-R |
0.436 |
|
| 2019 |
Tabima JF, Grünwald NJ. effectR: An Expandable R Package to Predict Candidate RxLR and CRN Effectors in Oomycetes Using Motif Searches. Molecular Plant-Microbe Interactions. 32: 1067-1076. PMID 30951442 DOI: 10.1094/Mpmi-10-18-0279-Ta |
0.387 |
|
| 2019 |
Dale AL, Feau N, Everhart SE, Dhillon B, Wong B, Sheppard J, Bilodeau GJ, Brar A, Tabima JF, Shen D, Brasier CM, Tyler BM, Grünwald NJ, Hamelin RC. Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen . Mbio. 10. PMID 30862749 DOI: 10.1128/Mbio.02452-18 |
0.477 |
|
| 2018 |
Mideros MF, Turissini DA, Guayazán N, Ibarra-Avila H, Danies G, Cárdenas M, Myers K, Tabima J, Goss EM, Bernal A, Lagos LE, Grajales A, Gonzalez LN, Cooke DEL, Fry WE, et al. , a new species within clade 1c causing late blight on in Colombia. Persoonia. 41: 39-55. PMID 30728598 DOI: 10.3767/Persoonia.2018.41.03 |
0.448 |
|
| 2018 |
Davis EW, Tabima JF, Weisberg AJ, Lopes LD, Wiseman MS, Wiseman MS, Pupko T, Belcher MS, Sechler AJ, Tancos MA, Schroeder BK, Murray TD, Luster DG, Schneider WL, Rogers EE, et al. Evolution of the U.S. Biological Select Agent Rathayibacter toxicus. Mbio. 9. PMID 30154261 DOI: 10.1128/Mbio.01280-18 |
0.5 |
|
| 2018 |
Tabima JF, Coffey MD, Zasada I, Grünwald NJ. Populations of Phytophthora rubi show little differentiation and high rates of migration among states in the Western United States. Molecular Plant-Microbe Interactions : Mpmi. PMID 29451433 DOI: 10.1094/Mpmi-10-17-0258-R |
0.388 |
|
| 2018 |
Brar S, Tabima JF, McDougal RL, Dupont P‐, Feau N, Hamelin RC, Panda P, LeBoldus JM, Grünwald NJ, Hansen EM, Bradshaw RE, Williams NM. Genetic diversity of Phytophthora pluvialis, a pathogen of conifers, in New Zealand and the west coast of the United States of America Plant Pathology. 67: 1131-1139. DOI: 10.1111/Ppa.12812 |
0.417 |
|
| 2017 |
Tabima J, Kronmiller B, Press C, Tyler BM, Zasada I, Grünwald NJ. Whole genome sequences of the raspberry and strawberry pathogens Phytophthora rubi and P. fragariae. Molecular Plant-Microbe Interactions : Mpmi. PMID 28682157 DOI: 10.1094/Mpmi-04-17-0081-A |
0.474 |
|
| 2016 |
Hansen ZR, Knaus BJ, Tabima JF, Press CM, Judelson HS, Grünwald NJ, Smart CD. SNP-Based Differentiation of Phytophthora infestans Clonal Lineages Using Locked Nucleic Acid Probes and High-Resolution Melt Analysis. Plant Disease. 100: 1297-1306. PMID 30686206 DOI: 10.1094/Pdis-11-15-1247-Re |
0.358 |
|
| 2016 |
Chang JH, Tabima JF. A Covert Operation by a Plant Pathogen. Cell Host & Microbe. 20: 413-415. PMID 27736639 DOI: 10.1016/J.Chom.2016.09.010 |
0.339 |
|
| 2016 |
Tabima JF, Everhart SE, Larsen MM, Weisberg AJ, Kamvar ZN, Tancos MA, Smart CD, Chang JH, Grünwald NJ. Microbe-ID: an open source toolbox for microbial genotyping and species identification. Peerj. 4: e2279. PMID 27602267 DOI: 10.7717/Peerj.2279 |
0.433 |
|
| 2016 |
Davis Ii EW, Weisberg AJ, Tabima JF, Grunwald NJ, Chang JH. Gall-ID: tools for genotyping gall-causing phytopathogenic bacteria. Peerj. 4: e2222. PMID 27547538 DOI: 10.7717/Peerj.2222 |
0.471 |
|
| 2016 |
Knaus BJ, Tabima J, Davis C, Judelson H, Grünwald NJ. Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared common ancestry for clonal lineages US11 and US18 and a lack of recently shared ancestry among all other US lineages. Phytopathology. PMID 27348344 DOI: 10.1094/Phyto-10-15-0279-R |
0.435 |
|
| 2015 |
Sanjuan TI, Franco-Molano AE, Kepler RM, Spatafora JW, Tabima J, Vasco-Palacios AM, Restrepo S. Five new species of entomopathogenic fungi from the Amazon and evolution of neotropical Ophiocordyceps. Fungal Biology. 119: 901-16. PMID 26399185 DOI: 10.1016/J.Funbio.2015.06.010 |
0.455 |
|
| 2014 |
Stewart JE, Kroese D, Tabima JF, Larsen MM, Fieland VJ, Press CM, Zasada IA, Grünwald NJ. Pathogenicity, Fungicide Resistance, and Genetic Variability of Phytophthora rubi Isolates from Raspberry (Rubus idaeus) in the Western United States. Plant Disease. 98: 1702-1708. PMID 30703886 DOI: 10.1094/Pdis-11-13-1130-Re |
0.383 |
|
| 2014 |
Cristancho MA, Botero-Rozo DO, Giraldo W, Tabima J, Riaño-Pachón DM, Escobar C, Rozo Y, Rivera LF, Durán A, Restrepo S, Eilam T, Anikster Y, Gaitán AL. Annotation of a hybrid partial genome of the coffee rust (Hemileia vastatrix) contributes to the gene repertoire catalog of the Pucciniales. Frontiers in Plant Science. 5: 594. PMID 25400655 DOI: 10.3389/Fpls.2014.00594 |
0.476 |
|
| 2014 |
Restrepo S, Tabima JF, Mideros MF, Grünwald NJ, Matute DR. Speciation in fungal and oomycete plant pathogens. Annual Review of Phytopathology. 52: 289-316. PMID 24906125 DOI: 10.1146/Annurev-Phyto-102313-050056 |
0.455 |
|
| 2014 |
Goss EM, Tabima JF, Cooke DE, Restrepo S, Fry WE, Forbes GA, Fieland VJ, Cardenas M, Grünwald NJ. The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes. Proceedings of the National Academy of Sciences of the United States of America. 111: 8791-6. PMID 24889615 DOI: 10.1073/Pnas.1401884111 |
0.474 |
|
| 2014 |
Sanjuan T, Tabima J, Restrepo S, Læssøe T, Spatafora JW, Franco-Molano AE. Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto). Mycologia. 106: 260-75. PMID 24782494 DOI: 10.3852/106.2.260 |
0.35 |
|
| 2014 |
Kamvar ZN, Tabima JF, Grünwald NJ. Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction. Peerj. 2: e281. PMID 24688859 DOI: 10.7717/Peerj.281 |
0.32 |
|
| 2014 |
Sanjuan TI, Tabima J, Spatafora JW, Laessoe T, Restrepo S, Franco Molano AE. Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto). Mycologia. PMID 24459123 DOI: 10.3852/13-020 |
0.431 |
|
| 2013 |
Arrieta-Ortiz ML, RodrÃguez-R LM, Pérez-Quintero Ã, Poulin L, DÃaz AC, Arias Rojas N, Trujillo C, Restrepo Benavides M, Bart R, Boch J, Boureau T, Darrasse A, David P, Dugé de Bernonville T, Fontanilla P, ... ... Tabima J, et al. Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. Manihotis strain CIO151. Plos One. 8: e79704. PMID 24278159 DOI: 10.1371/Journal.Pone.0079704 |
0.455 |
|
| 2012 |
Guevara M, Muñoz A, Amado Y, Bocanegra L, Sopo L, Motta A, García MCCd, Tabima J, Restrepo S, Celis A. Fusarium species associated with onychomycoses in Colombia F1000research. 3. DOI: 10.7490/F1000Research.1091938.1 |
0.345 |
|
| 2012 |
Cárdenas M, Tabima J, Fry WE, Grünwald NJ, Bernal A, Restrepo S. Defining species boundaries in the genus Phytophthora: the case of Phytophthora andina A response to ‘Phytophthora andina sp. nov., a newly identified heterothallic pathogen of solanaceous hosts in the Andean highlands’ (Oliva et al., 2010) Plant Pathology. 61: 215-220. DOI: 10.1111/J.1365-3059.2011.02530.X |
0.416 |
|
| 2011 |
Cárdenas ME, Medina E, Tabima J, Vargas A, Lopera C, Bernal A, Restrepo S. First Report of Phytophthora infestans Causing Late Blight on Solanum viarum in Colombia. Plant Disease. 95: 875. PMID 30731720 DOI: 10.1094/Pdis-11-10-0853 |
0.39 |
|
| 2011 |
Olarte Castillo XA, Fermin G, Tabima J, Rojas Y, Tennant PF, Fuchs M, Sierra R, Bernal AJ, Restrepo S. Phylogeography and molecular epidemiology of Papaya ringspot virus Virus Research. 159: 132-140. PMID 21549774 DOI: 10.1016/J.Virusres.2011.04.011 |
0.39 |
|
| Show low-probability matches. |