Anastasia K. Yocum, Ph.D.
Affiliations: | 2006 | University of Pennsylvania, Philadelphia, PA, United States |
Area:
PharmacologyGoogle:
"Anastasia Yocum"Parents
Sign in to add mentor| Ian A. Blair | grad student | 2006 | Penn | |
| (Proteomic approaches to the discovery of biomarkers and pharmacological targets.) | ||||
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Publications
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| Shanmugam AK, Yocum AK, Nesvizhskii AI. (2014) Utility of RNA-seq and GPMDB protein observation frequency for improving the sensitivity of protein identification by tandem MS. Journal of Proteome Research. 13: 4113-9 |
| Fermin D, Basrur V, Yocum AK, et al. (2011) Abacus: a computational tool for extracting and pre-processing spectral count data for label-free quantitative proteomic analysis. Proteomics. 11: 1340-5 |
| Yocum AK, Khan AP, Zhao R, et al. (2010) Development of selected reaction monitoring-MS methodology to measure peptide biomarkers in prostate cancer. Proteomics. 10: 3506-14 |
| Omenn GS, Yocum AK, Menon R. (2010) Alternative splice variants, a new class of protein cancer biomarker candidates: findings in pancreatic cancer and breast cancer with systems biology implications. Disease Markers. 28: 241-51 |
| Yocum AK, Chinnaiyan AM. (2009) Current affairs in quantitative targeted proteomics: multiple reaction monitoring-mass spectrometry. Briefings in Functional Genomics & Proteomics. 8: 145-57 |
| Ulintz PJ, Yocum AK, Bodenmiller B, et al. (2009) Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification. Journal of Proteome Research. 8: 887-99 |
| Falkner JA, Falkner JW, Yocum AK, et al. (2008) A spectral clustering approach to MS/MS identification of post-translational modifications. Journal of Proteome Research. 7: 4614-22 |
| Yocum AK, Gratsch TE, Leff N, et al. (2008) Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation. Molecular & Cellular Proteomics : McP. 7: 750-67 |
| Lucitt MB, Price TS, Pizarro A, et al. (2008) Analysis of the zebrafish proteome during embryonic development. Molecular & Cellular Proteomics : McP. 7: 981-94 |
| Price TS, Lucitt MB, Wu W, et al. (2007) EBP, a program for protein identification using multiple tandem mass spectrometry datasets. Molecular & Cellular Proteomics : McP. 6: 527-36 |