Christopher A. Francis, Ph.D.
Affiliations: | Stanford University, Palo Alto, CA | ||
| 2000 | University of California, San Diego, La Jolla, CA |
Area:
Microbiology Biology, Biogeochemistry, Oceanography Biology, Molecular BiologyWebsite:
https://earthsci.stanford.edu/~caf/Google:
"Christopher Francis"Parents
Sign in to add mentor| Bradley M. Tebo | grad student | 2000 | UCSD | |
| (Diversity and molecular mechanisms of manganese(II) -oxidizing bacteria.) | ||||
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Publications
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| Rasmussen AN, Tolar BB, Bargar JR, et al. (2025) Metagenome-Assembled Genomes for Oligotrophic Nitrifiers From a Mountainous Gravelbed Floodplain. Environmental Microbiology. 27: e70060 |
| Rasmussen A, Francis CA. (2024) Dynamics and activity of an ammonia-oxidizing archaea bloom in South San Francisco Bay. The Isme Journal |
| Rasmussen AN, Francis CA. (2022) Genome-Resolved Metagenomic Insights into Massive Seasonal Ammonia-Oxidizing Archaea Blooms in San Francisco Bay. Msystems. e0127021 |
| Reji L, Cardarelli EL, Boye K, et al. (2021) Diverse ecophysiological adaptations of subsurface Thaumarchaeota in floodplain sediments revealed through genome-resolved metagenomics. The Isme Journal |
| Cardarelli EL, Bargar JR, Francis CA. (2020) Diverse Thaumarchaeota Dominate Subsurface Ammonia-oxidizing Communities in Semi-arid Floodplains in the Western United States. Microbial Ecology |
| Reji L, Tolar BB, Chavez FP, et al. (2020) Depth-Differentiation and Seasonality of Planktonic Microbial Assemblages in the Monterey Bay Upwelling System. Frontiers in Microbiology. 11: 1075 |
| Reji L, Francis CA. (2020) Metagenome-assembled genomes reveal unique metabolic adaptations of a basal marine Thaumarchaeota lineage. The Isme Journal |
| Tolar BB, Boye K, Bobb C, et al. (2020) Stability of Floodplain Subsurface Microbial Communities Through Seasonal Hydrological and Geochemical Cycles Frontiers in Earth Science. 8 |
| Reji L, Tolar BB, Smith JM, et al. (2019) Depth distributions of Nitrite Reductase (nirK) Gene Variants Reveal Spatial Dynamics of Thaumarchaeal Ecotype Populations in Coastal Monterey Bay. Environmental Microbiology |
| Reji L, Tolar BB, Smith JM, et al. (2019) Differential co-occurrence relationships shaping ecotype diversification within Thaumarchaeota populations in the coastal ocean water column. The Isme Journal |