Sergio E. Wong, Ph.D.
Affiliations: | 2006 | University of California, San Francisco, San Francisco, CA |
Area:
General BiophysicsGoogle:
"Sergio Wong"Parents
Sign in to add mentor| Matthew P. Jacobson | grad student | 2006 | UCSF | |
| (Modeling loop flexibility via conformational ensembles.) | ||||
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Publications
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| Carpenter TS, Kirshner DA, Lau EY, et al. (2014) A method to predict blood-brain barrier permeability of drug-like compounds using molecular dynamics simulations. Biophysical Journal. 107: 630-41 |
| Nilmeier JP, Kirshner DA, Wong SE, et al. (2013) Rapid Catalytic Template Searching as an Enzyme Function Prediction Procedure Plos One. 8 |
| Wong SE, Sellers BD, Jacobson MP. (2011) Effects of somatic mutations on CDR loop flexibility during affinity maturation. Proteins. 79: 821-9 |
| Edreira MM, Li S, Hochbaum D, et al. (2009) Phosphorylation-induced conformational changes in Rap1b: allosteric effects on switch domains and effector loop. The Journal of Biological Chemistry. 284: 27480-6 |
| Wong S, Amaro RE, McCammon JA. (2009) MM-PBSA Captures Key Role of Intercalating Water Molecules at a Protein-Protein Interface. Journal of Chemical Theory and Computation. 5: 422-429 |
| Baron R, Wong SE, de Oliveira CA, et al. (2008) E9-Im9 colicin DNase-immunity protein biomolecular association in water: a multiple-copy and accelerated molecular dynamics simulation study. The Journal of Physical Chemistry. B. 112: 16802-14 |
| Wong SE, Baron R, McCammon JA. (2008) Hot-spot residues at the E9/Im9 interface help binding via different mechanisms. Biopolymers. 89: 916-20 |
| Wong S, Jacobson MP. (2008) Conformational selection in silico: loop latching motions and ligand binding in enzymes. Proteins. 71: 153-64 |
| Mandell DJ, Chorny I, Groban ES, et al. (2007) Strengths of hydrogen bonds involving phosphorylated amino acid side chains. Journal of the American Chemical Society. 129: 820-7 |
| Wong SE, Bernacki K, Jacobson M. (2005) Competition between intramolecular hydrogen bonds and solvation in phosphorylated peptides: simulations with explicit and implicit solvent. The Journal of Physical Chemistry. B. 109: 5249-58 |