Yi He
Affiliations: | 2009-2017 | Chemistry and Chemical Biology | University of New Mexico, Albuquerque, NM, United States |
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"Yi He"Parents
Sign in to add mentor| Harold Abraham Scheraga | research scientist | 2009-2017 | Cornell |
| Victor Munoz | research scientist | 2017-2018 | Chemistry and Biochemistry |
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Publications
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| Pineda LIG, Milko LN, He Y. (2020) Performance of CHARMM36m with modified water model in simulating intrinsically disordered proteins: a case study Biophysics Reports. 6: 80-87 |
| Sieradzan AK, Giełdoń A, Yin Y, et al. (2018) A new protein nucleic-acid coarse-grained force field based on the UNRES and NARES-2P force fields. Journal of Computational Chemistry |
| He Y, Nagpal S, Sadqi M, et al. (2018) Glutton: A tool for generating structural ensembles of partly disordered proteins from chemical shifts. Bioinformatics (Oxford, England) |
| Keasar C, McGuffin LJ, Wallner B, et al. (2018) An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12. Scientific Reports. 8: 9939 |
| He Y, Maisuradze GG, Yin Y, et al. (2017) Sequence-, structure-, and dynamics-based comparisons of structurally homologous CheY-like proteins. Proceedings of the National Academy of Sciences of the United States of America |
| Krupa P, Mozolewska MA, Wiśniewska M, et al. (2016) Performance of protein-structure predictions with the physics-based UNRES force field in CASP11. Bioinformatics (Oxford, England) |
| He Y, Liwo A, Scheraga HA. (2015) Optimization of a Nucleic Acids united-RESidue 2-Point model (NARES-2P) with a maximum-likelihood approach. The Journal of Chemical Physics. 143: 243111 |
| Yin Y, Sieradzan AK, Liwo A, et al. (2015) Physics-based potentials for coarse-grained modeling of protein-DNA interactions. Journal of Chemical Theory and Computation. 11: 1792-1808 |
| He Y, Rackovsky S, Yin Y, et al. (2015) Alternative approach to protein structure prediction based on sequential similarity of physical properties. Proceedings of the National Academy of Sciences of the United States of America. 112: 5029-32 |
| He Y, Liwo A, Scheraga HA. (2015) Optimization of a Nucleic Acids united-RESidue 2-Point model (NARES-2P) with a maximum-likelihood approach Journal of Chemical Physics. 143 |