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Bryn Colleen Taylor

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Computational Chemistry, Markov State Models, GPCRs, Microbiome, Metagenomics, Metabolomics, Machine Learning
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"Bryn Taylor"
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Parents

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Rommie E. Amaro grad student 2015-2020 UCSD
Rob Knight grad student 2015-2020 UCSD (FlyTree)

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Publications

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Martino C, Kellman BP, Sandoval DR, et al. (2025) SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx. Mbio. e0401524
Taylor BC, Sheikh Andalibi M, Wandro S, et al. (2023) Signatures of HIV and Major Depressive Disorder in the Plasma Microbiome. Microorganisms. 11
Koehler Leman J, Szczerbiak P, Renfrew PD, et al. (2023) Sequence-structure-function relationships in the microbial protein universe. Nature Communications. 14: 2351
Gan JL, Kumar D, Chen C, et al. (2022) Benchmarking ensemble docking methods in D3R Grand Challenge 4. Journal of Computer-Aided Molecular Design
Hempel T, Del Razo MJ, Lee CT, et al. (2021) Independent Markov decomposition: Toward modeling kinetics of biomolecular complexes. Proceedings of the National Academy of Sciences of the United States of America. 118
Gligorijević V, Renfrew PD, Kosciolek T, et al. (2021) Structure-based protein function prediction using graph convolutional networks. Nature Communications. 12: 3168
Jung CE, Estaki M, Chopyk J, et al. (2021) Impact of Vaginal Estrogen on the Urobiome in Postmenopausal Women With Recurrent Urinary Tract Infection. Female Pelvic Medicine & Reconstructive Surgery
Casalino L, Gaieb Z, Goldsmith JA, et al. (2020) Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein. Acs Central Science. 6: 1722-1734
Taylor BC, Weldon KC, Ellis RJ, et al. (2020) Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV. Msystems. 5
Taylor BC, Weldon KC, Ellis RJ, et al. (2020) Depression in Individuals Coinfected with HIV and HCV Is Associated with Systematic Differences in the Gut Microbiome and Metabolome. Msystems. 5
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