| Year |
Citation |
Score |
| 2023 |
Chavan A, Heisler J, Chang YG, Golden SS, Partch CL, LiWang A. Protocols for in vitro reconstitution of the cyanobacterial circadian clock. Biopolymers. e23559. PMID 37421636 DOI: 10.1002/bip.23559 |
0.322 |
|
| 2023 |
Fang M, Chavan AG, LiWang A, Golden SS. Synchronization of the circadian clock to the environment tracked in real time. Proceedings of the National Academy of Sciences of the United States of America. 120: e2221453120. PMID 36940340 DOI: 10.1073/pnas.2221453120 |
0.318 |
|
| 2022 |
Swan JA, Sandate CR, Chavan AG, Freeberg AM, Etwaru D, Ernst DC, Palacios JG, Golden SS, LiWang A, Lander GC, Partch CL. Coupling of distant ATPase domains in the circadian clock protein KaiC. Nature Structural & Molecular Biology. PMID 35864165 DOI: 10.1038/s41594-022-00803-w |
0.358 |
|
| 2022 |
Chow GK, Chavan AG, Heisler J, Chang YG, Zhang N, LiWang A, Britt RD. A Night-Time Edge Site Intermediate in the Cyanobacterial Circadian Clock Identified by EPR Spectroscopy. Journal of the American Chemical Society. PMID 34979080 DOI: 10.1021/jacs.1c08103 |
0.319 |
|
| 2020 |
Zhang N, Chang YG, Tseng R, Ovchinnikov S, Schwarz R, LiWang A. Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation. Protein Science : a Publication of the Protein Society. PMID 32949024 DOI: 10.1002/Pro.3952 |
0.301 |
|
| 2020 |
Chen N, Das M, LiWang A, Wang LP. Sequence-Based Prediction of Metamorphic Behavior in Proteins. Biophysical Journal. PMID 32937108 DOI: 10.1016/J.Bpj.2020.07.034 |
0.324 |
|
| 2020 |
Hong L, Lavrentovich DO, Chavan A, Leypunskiy E, Li E, Matthews C, LiWang A, Rust MJ, Dinner AR. Bayesian modeling reveals metabolite-dependent ultrasensitivity in the cyanobacterial circadian clock. Molecular Systems Biology. 16: e9355. PMID 32496641 DOI: 10.15252/Msb.20199355 |
0.396 |
|
| 2020 |
Chow G, Chavan AG, Heisler J, Chang YG, LiWang A, Britt RD. Monitoring Protein-Protein Interactions in the Cyanobacterial Circadian Clock in Real Time via Electron Paramagnetic Resonance Spectroscopy. Biochemistry. PMID 32453554 DOI: 10.1021/Acs.Biochem.0C00279 |
0.458 |
|
| 2020 |
Partch CL, Swan JA, Heisler JC, LiWang A. Fold-Switching Sets the Stage for Cooperativity and Competition in the Cyanobacterial Circadian Clock Biophysical Journal. 118: 23a. DOI: 10.1096/Fasebj.2020.34.S1.00246 |
0.309 |
|
| 2020 |
Heisler JC, Swan JA, Chavan AG, Partch CL, LiWang A. Clock Output Serves Dual Purpose of Gene Regulation and Time Keeping Biophysical Journal. 118: 51a. DOI: 10.1016/J.Bpj.2019.11.461 |
0.312 |
|
| 2019 |
LiWang A. Proteins that Tell Time Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.297 |
0.32 |
|
| 2018 |
Welkie DG, Rubin BE, Chang YG, Diamond S, Rifkin SA, LiWang A, Golden SS. Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA. Proceedings of the National Academy of Sciences of the United States of America. PMID 29991601 DOI: 10.1073/Pnas.1802940115 |
0.393 |
|
| 2018 |
Swan JA, Golden S, LiWang A, Partch CL. Structure, function, and mechanism of the core circadian clock in cyanobacteria. The Journal of Biological Chemistry. PMID 29440392 DOI: 10.1074/Jbc.Tm117.001433 |
0.433 |
|
| 2018 |
Partch CL, Swan J, Heisler J, Golden SS, LiWang A. The time machine: structure-based elucidation of timekeeping mechanisms by the cyanobacterial circadian clock Acta Crystallographica Section a Foundations and Advances. 74: a34-a34. DOI: 10.1107/S0108767318099658 |
0.329 |
|
| 2018 |
Swan JA, Heisler J, Dailley C, LiWang A, Partch CL. Mechanisms of Output Signaling from a Circadian Oscillator Biophysical Journal. 114: 69a-70a. DOI: 10.1016/J.Bpj.2017.11.428 |
0.305 |
|
| 2018 |
LiWang A. Ticking Mechanism of a Biological Clock Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.296 |
0.319 |
|
| 2017 |
Tseng R, Goularte NF, Chavan A, Luu J, Cohen SE, Chang YG, Heisler J, Li S, Michael AK, Tripathi S, Golden SS, LiWang A, Partch CL. Structural basis of the day-night transition in a bacterial circadian clock. Science (New York, N.Y.). 355: 1174-1180. PMID 28302851 DOI: 10.1126/Science.Aag2516 |
0.426 |
|
| 2015 |
Chang YG, Cohen SE, Phong C, Myers WK, Kim YI, Tseng R, Lin J, Zhang L, Boyd JS, Lee Y, Kang S, Lee D, Li S, Britt RD, Rust MJ, ... ... LiWang A, et al. A protein fold switch joins the circadian oscillator to clock output in cyanobacteria. Science (New York, N.Y.). PMID 26113641 DOI: 10.1126/Science.1260031 |
0.773 |
|
| 2014 |
Tseng R, Chang YG, Bravo I, Latham R, Chaudhary A, Kuo NW, Liwang A. Cooperative KaiA-KaiB-KaiC interactions affect KaiB/SasA competition in the circadian clock of cyanobacteria. Journal of Molecular Biology. 426: 389-402. PMID 24112939 DOI: 10.1016/J.Jmb.2013.09.040 |
0.78 |
|
| 2014 |
Chang Y, Tseng R, Myers WK, Kerby J, Britt D, LiWang A. Structural Gymnastics by Proteins make the Clock Mechanism go Round and Round Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.201 |
0.451 |
|
| 2013 |
Chang YG, Tseng R, Kuo NW, LiWang A. Nuclear magnetic resonance spectroscopy of the circadian clock of cyanobacteria. Integrative and Comparative Biology. 53: 93-102. PMID 23667047 DOI: 10.1093/Icb/Ict054 |
0.743 |
|
| 2013 |
Tseng R, Kerby JD, Chang Y, LiWang A. How do Three Proteins Generate Circadian Rhythms? The Detailed Timing Mechanism of the Cyanobacterial Circadian Oscillator Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.1267 |
0.492 |
|
| 2012 |
Chang YG, Tseng R, Kuo NW, LiWang A. Rhythmic ring-ring stacking drives the circadian oscillator clockwise. Proceedings of the National Academy of Sciences of the United States of America. 109: 16847-51. PMID 22967510 DOI: 10.1073/Pnas.1211508109 |
0.776 |
|
| 2011 |
Chang YG, Kuo NW, Tseng R, LiWang A. Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America. 108: 14431-6. PMID 21788479 DOI: 10.1073/Pnas.1104221108 |
0.776 |
|
| 2010 |
Wood TL, Bridwell-Rabb J, Kim YI, Gao T, Chang YG, LiWang A, Barondeau DP, Golden SS. The KaiA protein of the cyanobacterial circadian oscillator is modulated by a redox-active cofactor. Proceedings of the National Academy of Sciences of the United States of America. 107: 5804-9. PMID 20231482 DOI: 10.1073/Pnas.0910141107 |
0.771 |
|
| 2009 |
Abildgaard J, Hansen PE, Manalo MN, LiWang A. Deuterium isotope effects on 15N backbone chemical shifts in proteins. Journal of Biomolecular Nmr. 44: 119-26. PMID 19455282 DOI: 10.1007/S10858-009-9316-0 |
0.361 |
|
| 2009 |
Chen Y, Kim YI, Mackey SR, Holtman CK, Liwang A, Golden SS. A novel allele of kaiA shortens the circadian period and strengthens interaction of oscillator components in the cyanobacterium Synechococcus elongatus PCC 7942. Journal of Bacteriology. 191: 4392-400. PMID 19395479 DOI: 10.1128/Jb.00334-09 |
0.77 |
|
| 2008 |
Kim YI, Dong G, Carruthers CW, Golden SS, LiWang A. The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America. 105: 12825-30. PMID 18728181 DOI: 10.1073/Pnas.0800526105 |
0.756 |
|
| 2007 |
Manalo MN, Pérez LM, LiWang A. Hydrogen-bonding and pi-pi base-stacking interactions are coupled in DNA, as suggested by calculated and experimental trans-Hbond deuterium isotope shifts. Journal of the American Chemical Society. 129: 11298-9. PMID 17722918 DOI: 10.1021/Ja0692940 |
0.329 |
|
| 2007 |
Golden SS, Cassone VM, LiWang A. Shifting nanoscopic clock gears. Nature Structural & Molecular Biology. 14: 362-3. PMID 17473879 DOI: 10.1038/Nsmb0507-362 |
0.371 |
|
| 2007 |
Gao T, Zhang X, Ivleva NB, Golden SS, LiWang A. NMR structure of the pseudo-receiver domain of CikA. Protein Science : a Publication of the Protein Society. 16: 465-75. PMID 17322531 DOI: 10.1110/Ps.062532007 |
0.387 |
|
| 2007 |
Manalo MN, Kong X, LiWang A. Sensitivity of hydrogen bonds of DNA and RNA to hydration, as gauged by 1JNH measurements in ethanol-water mixtures. Journal of Biomolecular Nmr. 37: 257-63. PMID 17310327 DOI: 10.1007/S10858-006-9132-8 |
0.31 |
|
| 2007 |
Golden SS, Cassone VM, LiWang A. Erratum: Corrigendum: Shifting nanoscopic clock gears Nature Structural & Molecular Biology. 14: 568-568. DOI: 10.1038/Nsmb0607-568B |
0.364 |
|
| 2006 |
Ivleva NB, Gao T, LiWang AC, Golden SS. Quinone sensing by the circadian input kinase of the cyanobacterial circadian clock. Proceedings of the National Academy of Sciences of the United States of America. 103: 17468-73. PMID 17088557 DOI: 10.1073/Pnas.0606639103 |
0.463 |
|
| 2006 |
Kim YI, Manalo MN, Peréz LM, LiWang A. Computational and empirical trans-hydrogen bond deuterium isotope shifts suggest that N1-N3 A:U hydrogen bonds of RNA are shorter than those of A:T hydrogen bonds of DNA. Journal of Biomolecular Nmr. 34: 229-36. PMID 16645813 DOI: 10.1007/S10858-006-0021-Y |
0.734 |
|
| 2005 |
Manalo MN, Kong X, LiWang A. 1JNH values show that N1...N3 hydrogen bonds are stronger in dsRNA A:U than dsDNA A:T base pairs. Journal of the American Chemical Society. 127: 17974-5. PMID 16366527 DOI: 10.1021/Ja055826L |
0.339 |
|
| 2005 |
Gao T, Zhang X, Xia Y, Cho Y, Sacchettini JC, Golden SS, Liwang AC. 1H, 13C and 15N chemical shift assignments of the C-terminal, 133-residue pseudo-receiver domain of circadian input kinase (CikA) in Synechococcus elongatus. Journal of Biomolecular Nmr. 32: 259. PMID 16132830 DOI: 10.1007/S10858-005-7945-5 |
0.417 |
|
| 2004 |
Vakonakis I, Klewer DA, Williams SB, Golden SS, LiWang AC. Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA. Journal of Molecular Biology. 342: 9-17. PMID 15313603 DOI: 10.1016/J.Jmb.2004.07.010 |
0.709 |
|
| 2004 |
Vakonakis I, LiWang AC. Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation. Proceedings of the National Academy of Sciences of the United States of America. 101: 10925-30. PMID 15256595 DOI: 10.1073/Pnas.0403037101 |
0.698 |
|
| 2004 |
Vakonakis I, LiWang AC. N1...N3 hydrogen bonds of A:U base pairs of RNA are stronger than those of A:T base pairs of DNA. Journal of the American Chemical Society. 126: 5688-9. PMID 15125660 DOI: 10.1021/Ja048981T |
0.645 |
|
| 2004 |
Vakonakis I, LiWang AC. Trans-hydrogen bond deuterium isotope effects of A:T base pairs in DNA. Journal of Biomolecular Nmr. 29: 65-72. PMID 15017140 DOI: 10.1023/B:Jnmr.0000019507.95667.3E |
0.66 |
|
| 2004 |
Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC. Crystal structure of circadian clock protein KaiA from Synechococcus elongatus. The Journal of Biological Chemistry. 279: 20511-8. PMID 15007067 DOI: 10.1074/Jbc.M400077200 |
0.704 |
|
| 2004 |
Vakonakis I, LiWang AC. Sequence-specific 1H, 13C and 15N resonance assignments of the C-terminal domain of KaiA, a circadian clock protein. Journal of Biomolecular Nmr. 28: 403-4. PMID 14872133 DOI: 10.1023/B:Jnmr.0000015373.13794.C7 |
0.694 |
|
| 2004 |
Vakonakis I, Sun J, Wu T, Holzenburg A, Golden SS, LiWang AC. NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction. Proceedings of the National Academy of Sciences of the United States of America. 101: 1479-84. PMID 14749515 DOI: 10.1073/Pnas.0305516101 |
0.702 |
|
| 2004 |
Vakonakis I, LiWang A. Sequence-specific 1H, 13C and 15N resonance assignments of the C-terminal domain of KaiA, a circadian clock protein (reduced form) Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr5825 |
0.695 |
|
| 2004 |
Vakonakis I, LiWang AC. N1···N3 Hydrogen Bonds of A:U Base Pairs of RNA Are Stronger than Those of A:T Base Pairs of DNA [J. Am. Chem. Soc.2004,18, 5688−5689]. Journal of the American Chemical Society. 126: 7152-7152. DOI: 10.1021/Ja0408101 |
0.628 |
|
| 2003 |
LiWang AC, McCready DE, Drobny GP, Reid BR, Kennedy MA. Observation of a distinct transition in the mode of interconversion of ring pucker conformers in non-crystalline d-ribose-2'-d from 2H NMR spin-alignment. Journal of Biomolecular Nmr. 26: 249-57. PMID 12766421 DOI: 10.1023/A:1023899100654 |
0.329 |
|
| 2003 |
Vakonakis I, Salazar M, Kang M, Dunbar KR, LiWang AC. Deuterium isotope effects and fractionation factors of hydrogen-bonded A:T base pairs of DNA. Journal of Biomolecular Nmr. 25: 105-12. PMID 12652119 DOI: 10.1023/A:1022211927051 |
0.657 |
|
| 2002 |
Klewer DA, Williams SB, Golden SS, LiWang AC. Sequence-specific resonance assignments of the N-terminal, 105-residue KaiC-interacting domain of SasA, a protein necessary for a robust circadian rhythm in Synechococcus elongatus. Journal of Biomolecular Nmr. 24: 77-8. PMID 12449424 DOI: 10.1023/A:1020649703380 |
0.438 |
|
| 2002 |
Williams SB, Vakonakis I, Golden SS, LiWang AC. Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism. Proceedings of the National Academy of Sciences of the United States of America. 99: 15357-62. PMID 12438647 DOI: 10.1073/Pnas.232517099 |
0.699 |
|
| 2001 |
Vakonakis I, Risinger AT, Latham MP, Williams SB, Golden SS, LiWang AC. Sequence-specific 1H, 13C and 15N resonance assignments of the N-terminal, 135-residue domain of KaiA, a clock protein from Synechococcus elongatus. Journal of Biomolecular Nmr. 21: 179-80. PMID 11727983 DOI: 10.1023/A:1012478912174 |
0.717 |
|
| 1999 |
Liwang AC, Wang ZX, Sun Y, Peiper SC, LiWang PJ. The solution structure of the anti-HIV chemokine vMIP-II Protein Science. 8: 2270-2280. PMID 10595530 DOI: 10.1110/Ps.8.11.2270 |
0.314 |
|
| 1999 |
LiWang AC, Cao JJ, Zheng H, Lu Z, Peiper SC, LiWang PJ. Dynamics study on the anti-human immunodeficiency virus chemokine viral macrophage-inflammatory protein-II (VMIP-II) reveals a fully monomeric protein Biochemistry. 38: 442-453. PMID 9890927 DOI: 10.1021/Bi9812726 |
0.355 |
|
| 1997 |
Liwang AC, Bax A. Solution NMR characterization of hydrogen bonds in a protein by indirect measurement of deuterium quadrupole couplings. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 127: 54-64. PMID 9245630 DOI: 10.1006/Jmre.1997.1187 |
0.39 |
|
| Show low-probability matches. |