| Year |
Citation |
Score |
| 2022 |
Corin K, Bowie JU. How physical forces drive the process of helical membrane protein folding. Embo Reports. e53025. PMID 35133709 DOI: 10.15252/embr.202153025 |
0.334 |
|
| 2020 |
Corin K, Bowie JU. How bilayer properties influence membrane protein folding. Protein Science : a Publication of the Protein Society. PMID 33058341 DOI: 10.1002/pro.3973 |
0.328 |
|
| 2020 |
Sherkhanov S, Korman TP, Chan S, Faham S, Liu H, Sawaya MR, Hsu WT, Vikram E, Cheng T, Bowie JU. Isobutanol production freed from biological limits using synthetic biochemistry. Nature Communications. 11: 4292. PMID 32855421 DOI: 10.1038/S41467-020-18124-1 |
0.77 |
|
| 2020 |
Valliere MA, Korman TP, Arbing MA, Bowie JU. A bio-inspired cell-free system for cannabinoid production from inexpensive inputs. Nature Chemical Biology. PMID 32839605 DOI: 10.1038/S41589-020-0631-9 |
0.778 |
|
| 2020 |
Bowie JU, Sherkhanov S, Korman TP, Valliere MA, Opgenorth PH, Liu H. Synthetic Biochemistry: The Bio-inspired Cell-Free Approach to Commodity Chemical Production. Trends in Biotechnology. PMID 31983463 DOI: 10.1016/J.Tibtech.2019.12.024 |
0.777 |
|
| 2019 |
Choi HK, Min D, Kang H, Shon MJ, Rah SH, Kim HC, Jeong H, Choi HJ, Bowie JU, Yoon TY. Watching helical membrane proteins fold reveals a common N-to-C-terminal folding pathway. Science (New York, N.Y.). 366: 1150-1156. PMID 31780561 DOI: 10.1126/Science.Aaw8208 |
0.443 |
|
| 2019 |
Valliere MA, Korman TP, Woodall NB, Khitrov GA, Taylor RE, Baker D, Bowie JU. Author Correction: A cell-free platform for the prenylation of natural products and application to cannabinoid production. Nature Communications. 10: 2363. PMID 31127097 DOI: 10.1038/S41467-019-10436-1 |
0.754 |
|
| 2019 |
Valliere MA, Korman TP, Woodall NB, Khitrov GA, Taylor RE, Baker D, Bowie JU. A cell-free platform for the prenylation of natural products and application to cannabinoid production. Nature Communications. 10: 565. PMID 30718485 DOI: 10.1038/S41467-019-08448-Y |
0.782 |
|
| 2018 |
Min D, Jefferson RE, Qi Y, Wang JY, Arbing MA, Im W, Bowie JU. Unfolding of a ClC chloride transporter retains memory of its evolutionary history. Nature Chemical Biology. PMID 29581582 DOI: 10.1038/S41589-018-0025-4 |
0.441 |
|
| 2018 |
Lu P, Min D, DiMaio F, Wei KY, Vahey MD, Boyken SE, Chen Z, Fallas JA, Ueda G, Sheffler W, Mulligan VK, Xu W, Bowie JU, Baker D. Accurate computational design of multipass transmembrane proteins. Science (New York, N.Y.). 359: 1042-1046. PMID 29496880 DOI: 10.1126/Science.Aaq1739 |
0.408 |
|
| 2017 |
Rothé B, Leettola CN, Leal-Esteban L, Cascio D, Fortier S, Isenschmid M, Bowie JU, Constam DB. Crystal Structure of Bicc1 SAM Polymer and Mapping of Interactions between the Ciliopathy-Associated Proteins Bicc1, ANKS3, and ANKS6. Structure (London, England : 1993). PMID 29290488 DOI: 10.1016/J.Str.2017.12.002 |
0.422 |
|
| 2017 |
Opgenorth PH, Korman TP, Iancu L, Bowie JU. A molecular rheostat maintains ATP levels to drive a synthetic biochemistry system. Nature Chemical Biology. PMID 28671683 DOI: 10.1038/Nchembio.2418 |
0.775 |
|
| 2017 |
Jefferson RE, Min D, Corin K, Wang JY, Bowie JU. Applications of single-molecule methods to membrane protein folding studies. Journal of Molecular Biology. PMID 28549924 DOI: 10.1016/J.Jmb.2017.05.021 |
0.444 |
|
| 2017 |
Korman TP, Opgenorth PH, Bowie JU. A synthetic biochemistry platform for cell free production of monoterpenes from glucose. Nature Communications. 8: 15526. PMID 28537253 DOI: 10.1038/Ncomms15526 |
0.774 |
|
| 2017 |
Woodall NB, Hadley S, Yin Y, Bowie JU. Complete Topology Inversion can be Part of Normal Membrane Protein Biogenesis. Protein Science : a Publication of the Protein Society. PMID 28168866 DOI: 10.1002/Pro.3131 |
0.435 |
|
| 2016 |
Vinokur JM, Cummins MC, Korman TP, Bowie JU. An Adaptation To Life In Acid Through A Novel Mevalonate Pathway. Scientific Reports. 6: 39737. PMID 28004831 DOI: 10.1038/Srep39737 |
0.778 |
|
| 2016 |
Opgenorth PH, Korman TP, Bowie JU. A synthetic biochemistry module for production of bio-based chemicals from glucose. Nature Chemical Biology. PMID 27065234 DOI: 10.1038/Nchembio.2062 |
0.774 |
|
| 2016 |
Sherkhanov S, Korman TP, Clarke SG, Bowie JU. Production of FAME biodiesel in E. coli by direct methylation with an insect enzyme. Scientific Reports. 6: 24239. PMID 27053100 DOI: 10.1038/Srep24239 |
0.77 |
|
| 2016 |
Woodall N, Yin Y, Bowie J. Dual Topology Generation of EmrE Biophysical Journal. 110: 56a. DOI: 10.1016/J.Bpj.2015.11.368 |
0.318 |
|
| 2016 |
Jefferson R, Chang Y, Lerner E, Weiss S, Bowie J. Single-Molecule Measurement of Membrane Protein Stability Biophysical Journal. 110: 396a. DOI: 10.1016/J.Bpj.2015.11.2138 |
0.654 |
|
| 2015 |
Cheng X, Kim JK, Kim Y, Bowie JU, Im W. Molecular dynamics simulation strategies for protein-micelle complexes. Biochimica Et Biophysica Acta. PMID 26679426 DOI: 10.1016/J.Bbamem.2015.12.012 |
0.42 |
|
| 2015 |
Min D, Jefferson RE, Bowie JU, Yoon TY. Mapping the energy landscape for second-stage folding of a single membrane protein. Nature Chemical Biology. PMID 26479439 DOI: 10.1016/J.Bpj.2015.11.1063 |
0.421 |
|
| 2015 |
Woodall NB, Yin Y, Bowie JU. Dual-topology insertion of a dual-topology membrane protein. Nature Communications. 6: 8099. PMID 26306475 DOI: 10.1038/Ncomms9099 |
0.359 |
|
| 2015 |
Nam HJ, Kim I, Bowie JU, Kim S. Metazoans evolved by taking domains from soluble proteins to expand intercellular communication network. Scientific Reports. 5: 9576. PMID 25923201 DOI: 10.1038/Srep09576 |
0.616 |
|
| 2015 |
Vinokur JM, Korman TP, Sawaya MR, Collazo M, Cascio D, Bowie JU. Structural analysis of mevalonate-3-kinase provides insight into the mechanisms of isoprenoid pathway decarboxylases. Protein Science : a Publication of the Protein Society. 24: 212-20. PMID 25422158 DOI: 10.1002/Pro.2607 |
0.785 |
|
| 2015 |
Bowie JU. Investigating Membrane Protein Folding Biophysical Journal. 108: 43a. DOI: 10.1016/J.Bpj.2014.11.265 |
0.425 |
|
| 2014 |
Schlebach JP, Woodall NB, Bowie JU, Park C. Bacteriorhodopsin folds through a poorly organized transition state. Journal of the American Chemical Society. 136: 16574-81. PMID 25369295 DOI: 10.1021/Ja508359N |
0.334 |
|
| 2014 |
Leettola CN, Knight MJ, Cascio D, Hoffman S, Bowie JU. Characterization of the SAM domain of the PKD-related protein ANKS6 and its interaction with ANKS3. Bmc Structural Biology. 14: 17. PMID 24998259 DOI: 10.1186/1472-6807-14-17 |
0.684 |
|
| 2014 |
Opgenorth PH, Korman TP, Bowie JU. A synthetic biochemistry molecular purge valve module that maintains redox balance. Nature Communications. 5: 4113. PMID 24936528 DOI: 10.1038/ncomms5113 |
0.778 |
|
| 2014 |
Sherkhanov S, Korman TP, Bowie JU. Improving the tolerance of Escherichia coli to medium-chain fatty acid production Metabolic Engineering. 25: 1-7. PMID 24932721 DOI: 10.1016/J.Ymben.2014.06.003 |
0.772 |
|
| 2014 |
Vinokur JM, Korman TP, Cao Z, Bowie JU. Evidence of a novel mevalonate pathway in archaea. Biochemistry. 53: 4161-8. PMID 24914732 DOI: 10.1021/Bi500566Q |
0.774 |
|
| 2014 |
Korman TP, Sahachartsiri B, Li D, Vinokur JM, Eisenberg D, Bowie JU. A synthetic biochemistry system for the in vitro production of isoprene from glycolysis intermediates. Protein Science : a Publication of the Protein Society. 23: 576-85. PMID 24623472 DOI: 10.1002/Pro.2436 |
0.778 |
|
| 2014 |
Chang YC, Bowie JU. Measuring membrane protein stability under native conditions Proceedings of the National Academy of Sciences of the United States of America. 111: 219-224. PMID 24367094 DOI: 10.1073/Pnas.1318576111 |
0.613 |
|
| 2014 |
Opgenorth PH, Korman TP, Bowie JU. A synthetic biochemistry molecular purge valve module that maintains redox balance Nature Communications. 5. DOI: 10.1038/ncomms5113 |
0.754 |
|
| 2013 |
Jefferson RE, Blois TM, Bowie JU. Membrane proteins can have high kinetic stability Journal of the American Chemical Society. 135: 15183-15190. PMID 24032628 DOI: 10.1021/Ja407232B |
0.819 |
|
| 2013 |
Hong H, Chang YC, Bowie JU. Measuring transmembrane helix interaction strengths in lipid bilayers using steric trapping. Methods in Molecular Biology (Clifton, N.J.). 1063: 37-56. PMID 23975771 DOI: 10.1007/978-1-62703-583-5_3 |
0.68 |
|
| 2013 |
Korman TP, Sahachartsiri B, Charbonneau DM, Huang GL, Beauregard M, Bowie JU. Dieselzymes: development of a stable and methanol tolerant lipase for biodiesel production by directed evolution. Biotechnology For Biofuels. 6: 70. PMID 23648063 DOI: 10.1186/1754-6834-6-70 |
0.782 |
|
| 2013 |
Nam HJ, Han SK, Bowie JU, Kim S. Rampant exchange of the structure and function of extramembrane domains between membrane and water soluble proteins. Plos Computational Biology. 9: e1002997. PMID 23555228 DOI: 10.1371/Journal.Pcbi.1002997 |
0.638 |
|
| 2013 |
Bowie JU. Membrane protein twists and turns Science. 339: 398-399. PMID 23349275 DOI: 10.1126/Science.1228655 |
0.438 |
|
| 2013 |
Korman TP, Sahachartsiri B, Charbonneau DM, Huang GL, Beauregard M, Bowie JU. Dieselzymes: Development of a stable and methanol tolerant lipase for biodiesel production by directed evolution Biotechnology For Biofuels. 6. DOI: 10.1186/1754-6834-6-70 |
0.766 |
|
| 2012 |
Korman TP, Bowie JU. Crystal Structure of Proteus mirabilis Lipase, a Novel Lipase from the Proteus/Psychrophilic Subfamily of Lipase Family I.1 Plos One. 7. PMID 23300806 DOI: 10.1371/Journal.Pone.0052890 |
0.783 |
|
| 2012 |
Kim J, Kim I, Han SK, Bowie JU, Kim S. Network rewiring is an important mechanism of gene essentiality change Scientific Reports. 2. PMID 23198090 DOI: 10.1038/Srep00900 |
0.488 |
|
| 2012 |
Meruelo AD, Han SK, Kim S, Bowie JU. Structural differences between thermophilic and mesophilic membrane proteins Protein Science. 21: 1746-1753. PMID 23001966 DOI: 10.1002/Pro.2157 |
0.823 |
|
| 2012 |
Cao Z, Bowie JU. Shifting hydrogen bonds may produce flexible transmembrane helices Proceedings of the National Academy of Sciences of the United States of America. 109: 8121-8126. PMID 22566663 DOI: 10.1073/Pnas.1201298109 |
0.358 |
|
| 2012 |
Schlebach JP, Cao Z, Bowie JU, Park C. Revisiting the folding kinetics of bacteriorhodopsin Protein Science. 21: 97-106. PMID 22095725 DOI: 10.1002/Pro.766 |
0.355 |
|
| 2012 |
Cao Z, Schlebach JP, Park C, Bowie JU. Thermodynamic stability of bacteriorhodopsin mutants measured relative to the bacterioopsin unfolded state Biochimica Et Biophysica Acta - Biomembranes. 1818: 1049-1054. PMID 21880269 DOI: 10.1016/J.Bbamem.2011.08.019 |
0.319 |
|
| 2011 |
Stafford RL, Hinde E, Knight MJ, Pennella MA, Ear J, Digman MA, Gratton E, Bowie JU. Tandem SAM domain structure of human Caskin1: a presynaptic, self-assembling scaffold for CASK. Structure (London, England : 1993). 19: 1826-36. PMID 22153505 DOI: 10.1016/J.Str.2011.09.018 |
0.68 |
|
| 2011 |
Ujwal R, Bowie JU. Crystallizing membrane proteins using lipidic bicelles Methods. 55: 337-341. PMID 21982781 DOI: 10.1016/J.Ymeth.2011.09.020 |
0.413 |
|
| 2011 |
Knight MJ, Leettola C, Gingery M, Li H, Bowie JU. A human sterile alpha motif domain polymerizome Protein Science. 20: 1697-1706. PMID 21805519 DOI: 10.1002/Pro.703 |
0.669 |
|
| 2011 |
Stafford RL, Ear J, Knight MJ, Bowie JU. The molecular basis of the Caskin1 and Mint1 interaction with CASK Journal of Molecular Biology. 412: 3-13. PMID 21763699 DOI: 10.1016/J.Jmb.2011.07.005 |
0.679 |
|
| 2011 |
Hong H, Bowie JU. Dramatic destabilization of transmembrane helix interactions by features of natural membrane environments. Journal of the American Chemical Society. 133: 11389-98. PMID 21682279 DOI: 10.1021/Ja204524C |
0.579 |
|
| 2011 |
Meruelo AD, Samish I, Bowie JU. TMKink: A method to predict transmembrane helix kinks Protein Science. 20: 1256-1264. PMID 21563225 DOI: 10.1002/Pro.653 |
0.76 |
|
| 2011 |
Stafford RL, Tang MY, Sawaya MR, Phillips ML, Bowie JU. Crystal structure of the central coiled-coil domain from human liprin-β2 Biochemistry. 50: 3807-3815. PMID 21462929 DOI: 10.1021/Bi200141E |
0.348 |
|
| 2011 |
Grabrucker AM, Knight MJ, Proepper C, Bockmann J, Joubert M, Rowan M, Nienhaus GU, Garner CC, Bowie JU, Kreutz MR, Gundelfinger ED, Boeckers TM. Concerted action of zinc and ProSAP/Shank in synaptogenesis and synapse maturation. The Embo Journal. 30: 569-81. PMID 21217644 DOI: 10.1038/Emboj.2010.336 |
0.613 |
|
| 2011 |
Schlebach JP, Kim MS, Joh NH, Bowie JU, Park C. Probing membrane protein unfolding with pulse proteolysis Journal of Molecular Biology. 406: 545-551. PMID 21192947 DOI: 10.1016/J.Jmb.2010.12.018 |
0.805 |
|
| 2011 |
Bowie JU. Membrane protein folding: How important are hydrogen bonds? Current Opinion in Structural Biology. 21: 42-49. PMID 21075614 DOI: 10.1016/J.Sbi.2010.10.003 |
0.34 |
|
| 2010 |
Hong H, Blois TM, Cao Z, Bowie JU. Method to measure strong protein-protein interactions in lipid bilayers using a steric trap. Proceedings of the National Academy of Sciences of the United States of America. 107: 19802-7. PMID 21041662 DOI: 10.1073/Pnas.1010348107 |
0.812 |
|
| 2010 |
Knight MJ, Joubert MK, Plotkowski ML, Kropat J, Gingery M, Sakane F, Merchant SS, Bowie JU. Zinc binding drives sheet formation by the SAM domain of diacylglycerol kinase δ. Biochemistry. 49: 9667-76. PMID 20857926 DOI: 10.1021/Bi101261X |
0.792 |
|
| 2010 |
Di Pietro SM, Cascio D, Feliciano D, Bowie JU, Payne GS. Regulation of clathrin adaptor function in endocytosis: novel role for the SAM domain. The Embo Journal. 29: 1033-44. PMID 20150898 DOI: 10.1038/Emboj.2010.5 |
0.363 |
|
| 2010 |
Ryan CM, Souda P, Bassilian S, Ujwal R, Zhang J, Abramson J, Ping P, Durazo A, Bowie JU, Hasan SS, Baniulis D, Cramer WA, Faull KF, Whitelegge JP. Post-translational modifications of integral membrane proteins resolved by top-down Fourier transform mass spectrometry with collisionally activated dissociation Molecular and Cellular Proteomics. 9: 791-803. PMID 20093275 DOI: 10.1074/Mcp.M900516-Mcp200 |
0.389 |
|
| 2010 |
Hong H, Blois TM, Bowie JU. Measuring the Thermodynamic Stability of Strong Protein-Protein Interactions in Lipid Bilayers Using a Steric Trap Biophysical Journal. 98: 50a. DOI: 10.1016/J.Bpj.2009.12.287 |
0.818 |
|
| 2010 |
Blois TM, Hong H, Kim TH, Bowie JU. Studying Membrane Protein Thermodynamics Using a Steric Trap Biophysical Journal. 98: 50a. DOI: 10.1016/J.Bpj.2009.12.286 |
0.821 |
|
| 2010 |
Bowie JU. What Drives Membrane Protein Folding? Biophysical Journal. 98: 1a. DOI: 10.1016/J.Bpj.2009.12.005 |
0.449 |
|
| 2009 |
Oberai A, Joh NH, Pettit FK, Bowie JU. Structural imperatives impose diverse evolutionary constraints on helical membrane proteins Proceedings of the National Academy of Sciences of the United States of America. 106: 17747-17750. PMID 19815527 DOI: 10.1073/Pnas.0906390106 |
0.817 |
|
| 2009 |
Blois TM, Hong H, Kim TH, Bowie JU. Protein unfolding with a steric trap. Journal of the American Chemical Society. 131: 13914-5. PMID 19739627 DOI: 10.1021/Ja905725N |
0.81 |
|
| 2009 |
Joh NH, Oberai A, Yang D, Whitelegge JP, Bowie JU. Similar energetic contributions of packing in the core of membrane and water-soluble proteins Journal of the American Chemical Society. 131: 10846-10847. PMID 19603754 DOI: 10.1021/Ja904711K |
0.82 |
|
| 2009 |
Blois TM, Bowie JU. G-protein-coupled receptor structures were not built in a day Protein Science. 18: 1335-1342. PMID 19536805 DOI: 10.1002/Pro.165 |
0.806 |
|
| 2009 |
Hong H, Joh NH, Bowie JU, Tamm LK. Methods for measuring the thermodynamic stability of membrane proteins. Methods in Enzymology. 455: 213-36. PMID 19289208 DOI: 10.1016/S0076-6879(08)04208-0 |
0.826 |
|
| 2009 |
Massey-Gendel E, Zhao A, Boulting G, Kim HY, Balamotis MA, Seligman LM, Nakamoto RK, Bowie JU. Genetic selection system for improving recombinant membrane protein expression in E. coli Protein Science. 18: 372-383. PMID 19165721 DOI: 10.1002/Pro.39 |
0.802 |
|
| 2009 |
Meruelo AD, Bowie JU. Identifying polymer-forming SAM domains. Proteins. 74: 1-5. PMID 18831011 DOI: 10.1002/Prot.22232 |
0.758 |
|
| 2009 |
Faham S, Ujwal R, Abramson J, Bowie JU. Chapter 5 Practical Aspects of Membrane Proteins Crystallization in Bicelles Current Topics in Membranes. 63: 109-125. DOI: 10.1016/S1063-5823(09)63005-2 |
0.396 |
|
| 2009 |
Joh NH, Yang D, Min A, Bowie J. Forces that stabilize membrane proteins Biophysical Journal. 96: 334a. DOI: 10.1016/J.Bpj.2008.12.1681 |
0.811 |
|
| 2009 |
Meruelo AD, Bowie JU. Identifying polymer-forming SAM domains Proteins: Structure, Function and Bioinformatics. 74: 1-5. DOI: 10.1002/prot.22232 |
0.718 |
|
| 2008 |
Joh NH, Min A, Faham S, Whitelegge JP, Yang D, Woods VL, Bowie JU. Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins. Nature. 453: 1266-70. PMID 18500332 DOI: 10.1038/Nature06977 |
0.805 |
|
| 2008 |
Harada BT, Knight MJ, Imai Si, Qiao F, Ramachander R, Sawaya MR, Gingery M, Sakane F, Bowie JU. Regulation of Enzyme Localization by Polymerization: Polymer Formation by the SAM Domain of Diacylglycerol Kinase δ1 Structure. 16: 380-387. PMID 18334213 DOI: 10.1016/J.Str.2007.12.017 |
0.798 |
|
| 2008 |
Gorman PM, Kim S, Guo M, Melnyk RA, McLaurin J, Fraser PE, Bowie JU, Chakrabartty A. Dimerization of the transmembrane domain of amyloid precursor proteins and familial Alzheimer's disease mutants. Bmc Neuroscience. 9: 17. PMID 18234110 DOI: 10.1186/1471-2202-9-17 |
0.525 |
|
| 2008 |
Sapra KT, Balasubramanian GP, Labudde D, Bowie JU, Muller DJ. Point mutations in membrane proteins reshape energy landscape and populate different unfolding pathways. Journal of Molecular Biology. 376: 1076-90. PMID 18191146 DOI: 10.1016/J.Jmb.2007.12.027 |
0.36 |
|
| 2007 |
Nauli S, Farr S, Lee YJ, Kim HY, Faham S, Bowie JU. Polymer-driven crystallization Protein Science. 16: 2542-2551. PMID 17962407 DOI: 10.1110/Ps.073074207 |
0.305 |
|
| 2007 |
Plotkowski ML, Kim S, Phillips ML, Partridge AW, Deber CM, Bowie JU. Transmembrane domain of myelin protein zero can form dimers: Possible implications for myelin construction Biochemistry. 46: 12164-12173. PMID 17915947 DOI: 10.1021/Bi701066H |
0.789 |
|
| 2007 |
Pettit FK, Bare E, Tsai A, Bowie JU. HotPatch: a statistical approach to finding biologically relevant features on protein surfaces. Journal of Molecular Biology. 369: 863-79. PMID 17451744 DOI: 10.1016/J.Jmb.2007.03.036 |
0.343 |
|
| 2007 |
Barwe SP, Kim S, Rajasekaran SA, Bowie JU, Rajasekaran AK. Janus Model of The Na,K-ATPase β-Subunit Transmembrane Domain: Distinct Faces Mediate α/β Assembly and β-β Homo-oligomerization Journal of Molecular Biology. 365: 706-714. PMID 17078968 DOI: 10.1016/J.Jmb.2006.10.029 |
0.504 |
|
| 2006 |
Oberai A, Ihm Y, Kim S, Bowie JU. A limited universe of membrane protein families and folds Protein Science. 15: 1723-1734. PMID 16815920 DOI: 10.1110/Ps.062109706 |
0.736 |
|
| 2006 |
Gundelfinger ED, Boeckers TM, Baron MK, Bowie JU. A role for zinc in postsynaptic density asSAMbly and plasticity? Trends in Biochemical Sciences. 31: 366-73. PMID 16793273 DOI: 10.1016/J.Tibs.2006.05.007 |
0.774 |
|
| 2006 |
Bowie JU. Flip-flopping membrane proteins Nature Structural and Molecular Biology. 13: 94-96. PMID 16462808 DOI: 10.1038/Nsmb0206-94 |
0.409 |
|
| 2006 |
Baron MK, Boeckers TM, Vaida B, Faham S, Gingery M, Sawaya MR, Salyer D, Gundelfinger ED, Bowie JU. An architectural framework that may lie at the core of the postsynaptic density. Science (New York, N.Y.). 311: 531-5. PMID 16439662 DOI: 10.1126/Science.1118995 |
0.797 |
|
| 2006 |
Qiao F, Harada B, Song H, Whitelegge J, Courey AJ, Bowie JU. Mae inhibits Pointed-P2 transcriptional activity by blocking its MAPK docking site Embo Journal. 25: 70-79. PMID 16362034 DOI: 10.1038/Sj.Emboj.7600924 |
0.527 |
|
| 2005 |
Bowie JU. Solving the membrane protein folding problem Nature. 438: 581-589. PMID 16319877 DOI: 10.1038/Nature04395 |
0.412 |
|
| 2005 |
Kim S, Jeon TJ, Oberai A, Yang D, Schmidt JJ, Bowie JU. Transmembrane glycine zippers: Physiological and pathological roles in membrane proteins Proceedings of the National Academy of Sciences of the United States of America. 102: 14278-14283. PMID 16179394 DOI: 10.1073/Pnas.0501234102 |
0.75 |
|
| 2005 |
Lorch M, Fahem S, Kaiser C, Weber I, Mason AJ, Bowie JU, Glaubitz C. How to prepare membrane proteins for solid-state NMR: A case study on the α-helical integral membrane protein diacylglycerol kinase from E. coli Chembiochem. 6: 1693-1700. PMID 16138309 DOI: 10.1002/Cbic.200500054 |
0.403 |
|
| 2005 |
Song H, Nie M, Qiao F, Bowie JU, Courey AJ. Antagonistic regulation of Yan nuclear export by Mae and Crm1 may increase the stringency of the Ras response Genes and Development. 19: 1767-1772. PMID 16027171 DOI: 10.1101/Gad.1327405 |
0.517 |
|
| 2005 |
Qiao F, Bowie JU. The many faces of SAM. Science's Stke : Signal Transduction Knowledge Environment. 2005: re7. PMID 15928333 DOI: 10.1126/Stke.2862005Re7 |
0.609 |
|
| 2005 |
Kim CA, Sawaya MR, Cascio D, Kim W, Bowie JU. Structural organization of a Sex-comb-on-midleg/polyhomeotic copolymer. The Journal of Biological Chemistry. 280: 27769-75. PMID 15905166 DOI: 10.1074/Jbc.M503055200 |
0.355 |
|
| 2005 |
Faham S, Boulting GL, Massey EA, Yohannan S, Yang D, Bowie JU. Crystallization of bacteriorhodopsin from bicelle formulations at room temperature Protein Science. 14: 836-840. PMID 15689517 DOI: 10.1110/Ps.041167605 |
0.761 |
|
| 2005 |
Bowie JU. Cell biology: Border crossing Nature. 433: 367-369. PMID 15674274 DOI: 10.1038/433367A |
0.336 |
|
| 2005 |
Edwards MD, Li Y, Kim S, Miller S, Bartlett W, Black S, Dennison S, Iscla I, Blount P, Bowie JU, Booth IR. Pivotal role of the glycine-rich TM3 helix in gating the MscS mechanosensitive channel Nature Structural and Molecular Biology. 12: 113-119. PMID 15665866 DOI: 10.1038/Nsmb895 |
0.549 |
|
| 2005 |
Partridge AW, Liu S, Kim S, Bowie JU, Ginsberg MH. Transmembrane domain helix packing stabilizes integrin αIIbβ3 in the low affinity state Journal of Biological Chemistry. 280: 7294-7300. PMID 15591321 DOI: 10.1074/Jbc.M412701200 |
0.565 |
|
| 2004 |
Ramachander R, Bowie JU. SAM domains can utilize similar surfaces for the formation of polymers and closed oligomers Journal of Molecular Biology. 342: 1353-1358. PMID 15364564 DOI: 10.1016/J.Jmb.2004.08.011 |
0.798 |
|
| 2004 |
Chamberlain AK, Bowie JU. Analysis of side-chain rotamers in transmembrane proteins Biophysical Journal. 87: 3460-3469. PMID 15339811 DOI: 10.1529/Biophysj.104.044024 |
0.439 |
|
| 2004 |
Yohannan S, Yang D, Faham S, Boulting G, Whitelegge J, Bowie JU. Proline substitutions are not easily accommodated in a membrane protein Journal of Molecular Biology. 341: 1-6. PMID 15312757 DOI: 10.1016/J.Jmb.2004.06.025 |
0.804 |
|
| 2004 |
Kim S, Chamberlain AK, Bowie JU. A model of the closed form of the nicotinic acetylcholine receptor M2 channel pore Biophysical Journal. 87: 792-799. PMID 15298888 DOI: 10.1529/Biophysj.103.039396 |
0.498 |
|
| 2004 |
Chamberlain AK, Bowie JU. Asymmetric amino acid compositions of transmembrane β-strands Protein Science. 13: 2270-2274. PMID 15273317 DOI: 10.1110/Ps.04777304 |
0.411 |
|
| 2004 |
Qiao F, Song H, Kim CA, Sawaya MR, Hunter JB, Gingery M, Rebay I, Courey AJ, Bowie JU. Derepression by depolymerization; structural insights into the regulation of Yan by Mae. Cell. 118: 163-73. PMID 15260987 DOI: 10.1016/J.Cell.2004.07.010 |
0.581 |
|
| 2004 |
Chamberlain AK, Lee Y, Kim S, Bowie JU. Snorkeling preferences foster an amino acid composition bias in transmembrane helices Journal of Molecular Biology. 339: 471-479. PMID 15136048 DOI: 10.1016/J.Jmb.2004.03.072 |
0.524 |
|
| 2004 |
Kim S, Chamberlain AK, Bowie JU. Membrane channel structure of Helicobacter pylori vacuolating toxin: Role of multiple GXXXG motifs in cylindrical channels Proceedings of the National Academy of Sciences of the United States of America. 101: 5988-5991. PMID 15067113 DOI: 10.1073/Pnas.0308694101 |
0.513 |
|
| 2004 |
Bowie JU. Membrane proteins: A new method enters the fold Proceedings of the National Academy of Sciences of the United States of America. 101: 3995-3996. PMID 15024105 DOI: 10.1073/Pnas.0400671101 |
0.454 |
|
| 2004 |
Yohannan S, Faham S, Yang D, Grosfeld D, Chamberlain AK, Bowie JU. A Cα-H⋯O Hydrogen Bond in a Membrane Protein Is Not Stabilizing Journal of the American Chemical Society. 126: 2284-2285. PMID 14982414 DOI: 10.1021/Ja0317574 |
0.792 |
|
| 2004 |
Melnyk RA, Kim S, Curran AR, Engelman DM, Bowie JU, Deber CM. The affinity of GXXXG motifs in transmembrane helix-helix interactions is modulated by long-range communication. The Journal of Biological Chemistry. 279: 16591-7. PMID 14766751 DOI: 10.1074/Jbc.M313936200 |
0.603 |
|
| 2004 |
Yohannan S, Faham S, Yang D, Whitelegge JP, Bowie JU. The evolution of transmembrane helix kinks and the structural diversity of G protein-coupled receptors Proceedings of the National Academy of Sciences of the United States of America. 101: 959-963. PMID 14732697 DOI: 10.1073/Pnas.0306077101 |
0.821 |
|
| 2004 |
Salwinski L, Miller CS, Smith AJ, Pettit FK, Bowie JU, Eisenberg D. The Database of Interacting Proteins: 2004 update. Nucleic Acids Research. 32: D449-51. PMID 14681454 DOI: 10.1093/nar/gkh086 |
0.573 |
|
| 2004 |
Faham S, Yang D, Bare E, Yohannan S, Whitelegge JP, Bowie JU. Side-chain contributions to membrane protein structure and stability Journal of Molecular Biology. 335: 297-305. PMID 14659758 DOI: 10.1016/J.Jmb.2003.10.041 |
0.817 |
|
| 2003 |
Kim CA, Bowie JU. SAM domains: Uniform structure, diversity of function Trends in Biochemical Sciences. 28: 625-628. PMID 14659692 DOI: 10.1016/J.Tibs.2003.11.001 |
0.396 |
|
| 2003 |
Rajasekaran SA, Anilkumar G, Oshima E, Bowie JU, Liu H, Heston W, Bander NH, Rajasekaran AK. A Novel Cytoplasmic Tail MXXXL Motif Mediates the Internalization of Prostate-specific Membrane Antigen Molecular Biology of the Cell. 14: 4835-4845. PMID 14528023 DOI: 10.1091/Mbc.E02-11-0731 |
0.344 |
|
| 2003 |
Kim S, Chamberlain AK, Bowie JU. A simple method for modeling transmembrane helix oligomers Journal of Molecular Biology. 329: 831-840. PMID 12787681 DOI: 10.1016/S0022-2836(03)00521-7 |
0.584 |
|
| 2003 |
Partridge AW, Melnyk RA, Yang D, Bowie JU, Deber CM. A transmembrane segment mimic derived from Escherichia coli diacylglycerol kinase inhibits protein activity Journal of Biological Chemistry. 278: 22056-22060. PMID 12686537 DOI: 10.1074/Jbc.M210685200 |
0.373 |
|
| 2003 |
Chamberlain AK, Faham S, Yohannan S, Bowie JU. Construction of helix-bundle membrane proteins Advances in Protein Chemistry. 63: 19-46. PMID 12629965 DOI: 10.1016/S0065-3233(03)63002-0 |
0.825 |
|
| 2002 |
Tran HH, Kim CA, Faham S, Siddall MC, Bowie JU. Native interface of the SAM domain polymer of TEL. Bmc Structural Biology [Electronic Resource]. 2: 5. PMID 12193272 DOI: 10.1186/1472-6807-2-5 |
0.645 |
|
| 2002 |
Ramachander R, Kim CA, Phillips ML, Mackereth CD, Thanos CD, McIntosh LP, Bowie JU. Oligomerization-dependent association of the SAM domains from Schizosaccharomyces pombe Byr2 and Ste4 Journal of Biological Chemistry. 277: 39585-39593. PMID 12171939 DOI: 10.1074/Jbc.M207273200 |
0.802 |
|
| 2002 |
Kim CA, Gingery M, Pilpa RM, Bowie JU. The SAM domain of polyhomeotic forms a helical polymer Nature Structural Biology. 9: 453-457. PMID 11992127 DOI: 10.1038/Nsb802 |
0.382 |
|
| 2002 |
Faham S, Bowie JU. Bicelle crystallization: A new method for crystallizing membrane proteins yields a monomeric bacteriorhodopsin structure Journal of Molecular Biology. 316: 1-6. PMID 11829498 DOI: 10.1006/Jmbi.2001.5295 |
0.354 |
|
| 2001 |
Bowie JU. Stabilizing membrane proteins Current Opinion in Structural Biology. 11: 397-402. PMID 11495729 DOI: 10.1016/S0959-440X(00)00223-2 |
0.429 |
|
| 2001 |
Kim CA, Phillips ML, Kim W, Gingery M, Tran HH, Robinson MA, Faham S, Bowie JU. Polymerization of the SAM domain of TEL in leukemogenesis and transcriptional repression Embo Journal. 20: 4173-4182. PMID 11483520 DOI: 10.1093/Emboj/20.15.4173 |
0.628 |
|
| 2001 |
Zhou Y, Lau FW, Nauli S, Yang D, Bowie JU. Inactivation mechanism of the membrane protein diacylglycerol kinase in detergent solution Protein Science. 10: 378-383. PMID 11266623 DOI: 10.1110/Ps.34201 |
0.742 |
|
| 2000 |
Bowie JU. Membrane proteins. Are we destined to repeat history? Editorial overview Current Opinion in Structural Biology. 10: 435-437. PMID 10981631 DOI: 10.1016/S0959-440X(00)00111-1 |
0.406 |
|
| 2000 |
Nagy JK, Lau FW, Bowie JU, Sanders CR. Mapping the oligomeric interface of diacylglycerol kinase by engineered thiol cross-linking: Homologous sites in the transmembrane domain Biochemistry. 39: 4154-4164. PMID 10747807 DOI: 10.1021/Bi991781N |
0.662 |
|
| 2000 |
Zhou Y, Bowie JU. Building a thermostable membrane protein Journal of Biological Chemistry. 275: 6975-6979. PMID 10702260 DOI: 10.1074/Jbc.275.10.6975 |
0.592 |
|
| 2000 |
Bowie JU. Understanding membrane protein structure by design Nature Structural Biology. 7: 91-94. PMID 10655604 DOI: 10.1038/72454 |
0.433 |
|
| 1999 |
Bowie JU. Helix-bundle membrane protein fold templates. Protein Science : a Publication of the Protein Society. 8: 2711-9. PMID 10631987 DOI: 10.1110/Ps.8.12.2711 |
0.434 |
|
| 1999 |
Thanos CD, Faham S, Goodwill KE, Cascio D, Phillips M, Bowie JU. Monomeric structure of the human EphB2 sterile alpha motif domain. The Journal of Biological Chemistry. 274: 37301-6. PMID 10601296 DOI: 10.1074/Jbc.274.52.37301 |
0.374 |
|
| 1999 |
Thanos CD, Bowie JU. p53 Family members p63 and p73 are SAM domain-containing proteins. Protein Science : a Publication of the Protein Society. 8: 1708-10. PMID 10452616 DOI: 10.1110/Ps.8.8.1708 |
0.325 |
|
| 1999 |
Lau FW, Nauli S, Zhou Y, Bowie JU. Changing single side-chains can greatly enhance the resistance of a membrane protein to irreversible inactivation. Journal of Molecular Biology. 290: 559-64. PMID 10390353 DOI: 10.1006/Jmbi.1999.2905 |
0.72 |
|
| 1999 |
Lau FW, Chen X, Bowie JU. Active sites of diacylglycerol kinase from Escherichia coli are shared between subunits. Biochemistry. 38: 5521-7. PMID 10220339 DOI: 10.1021/Bi982763T |
0.633 |
|
| 1999 |
Thanos CD, Goodwill KE, Bowie JU. Oligomeric structure of the human EphB2 receptor SAM domain. Science (New York, N.Y.). 283: 833-6. PMID 9933164 DOI: 10.1126/Science.283.5403.833 |
0.409 |
|
| 1999 |
Pettit FK, Bowie JU. Protein surface roughness and small molecular binding sites. Journal of Molecular Biology. 285: 1377-82. PMID 9917382 DOI: 10.1006/Jmbi.1998.2411 |
0.343 |
|
| 1997 |
Zhou Y, Wen J, Bowie JU. A passive transmembrane helix. Nature Structural Biology. 4: 986-90. PMID 9406546 DOI: 10.1038/Nsb1297-986 |
0.557 |
|
| 1997 |
Eisenberg D, Lüthy R, Bowie JU. VERIFY3D: assessment of protein models with three-dimensional profiles. Methods in Enzymology. 277: 396-404. PMID 9379925 DOI: 10.1016/S0076-6879(97)77022-8 |
0.467 |
|
| 1997 |
Bowie JU. Helix packing in membrane proteins. Journal of Molecular Biology. 272: 780-9. PMID 9368657 DOI: 10.1006/Jmbi.1997.1279 |
0.423 |
|
| 1997 |
Lau FW, Bowie JU. A method for assessing the stability of a membrane protein. Biochemistry. 36: 5884-92. PMID 9153430 DOI: 10.1021/Bi963095J |
0.698 |
|
| 1996 |
Thanos CD, Bowie JU. Developmentally expressed myosin heavy-chain kinase possesses a diacylglycerol kinase domain. Protein Science : a Publication of the Protein Society. 5: 782-5. PMID 8845769 DOI: 10.1002/Pro.5560050424 |
0.303 |
|
| 1996 |
Bowie JU, Zhang K, Wilmanns M, Eisenberg D. Three-dimensional profiles for measuring compatibility of amino acid sequence with three-dimensional structure. Methods in Enzymology. 266: 598-616. PMID 8743708 DOI: 10.1016/S0076-6879(96)66037-6 |
0.461 |
|
| 1996 |
Fischer D, Rice D, Bowie JU, Eisenberg D. Assigning amino acid sequences to 3-dimensional protein folds. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 10: 126-36. PMID 8566533 DOI: 10.1096/Fasebj.10.1.8566533 |
0.492 |
|
| 1996 |
Wen J, Chen X, Bowie JU. Exploring the allowed sequence space of a membrane protein. Nature Structural Biology. 3: 141-8. PMID 8564540 DOI: 10.1038/Nsb0296-141 |
0.448 |
|
| 1995 |
Bowie JU, Pakula AA, Simon MI. The three-dimensional structure of the aspartate receptor from Escherichia coli. Acta Crystallographica. Section D, Biological Crystallography. 51: 145-54. PMID 15299315 DOI: 10.1107/S0907444994010498 |
0.356 |
|
| 1994 |
Bowie JU, Eisenberg D. An evolutionary approach to folding small alpha-helical proteins that uses sequence information and an empirical guiding fitness function. Proceedings of the National Academy of Sciences of the United States of America. 91: 4436-40. PMID 8183927 DOI: 10.1073/Pnas.91.10.4436 |
0.511 |
|
| 1993 |
Bowie JU, Eisenberg D. Inverted protein structure prediction Current Opinion in Structural Biology. 3: 437-444. DOI: 10.1016/S0959-440X(05)80118-6 |
0.505 |
|
| 1992 |
Lüthy R, Bowie JU, Eisenberg D. Assessment of protein models with three-dimensional profiles. Nature. 356: 83-5. PMID 1538787 DOI: 10.1038/356083A0 |
0.484 |
|
| 1992 |
Eisenberg D, Bowie JU, Lüthy R, Choe S. Three-dimensional profiles for analysing protein sequence-structure relationships. Faraday Discussions. 25-34. PMID 1290936 DOI: 10.1039/Fd9929300025 |
0.627 |
|
| 1991 |
Bowie JU, Lüthy R, Eisenberg D. A method to identify protein sequences that fold into a known three-dimensional structure. Science (New York, N.Y.). 253: 164-70. PMID 1853201 |
0.465 |
|
| 1991 |
Mossing MC, Bowie JU, Sauer RT. A streptomycin selection for DNA-binding activity. Methods in Enzymology. 208: 604-19. PMID 1838136 DOI: 10.1016/0076-6879(91)08031-C |
0.747 |
|
| 1991 |
Reidhaar-Olson JF, Bowie JU, Breyer RM, Hu JC, Knight KL, Lim WA, Mossing MC, Parsell DA, Shoemaker KR, Sauer RT. Random mutagenesis of protein sequences using oligonucleotide cassettes. Methods in Enzymology. 208: 564-86. PMID 1779849 DOI: 10.1016/0076-6879(91)08029-H |
0.788 |
|
| 1990 |
Bowie JU, Reidhaar-Olson JF, Lim WA, Sauer RT. Deciphering the message in protein sequences: tolerance to amino acid substitutions. Science (New York, N.Y.). 247: 1306-10. PMID 2315699 DOI: 10.1126/Science.2315699 |
0.675 |
|
| 1990 |
Bowie JU, Sauer RT. TraY proteins of F and related episomes are members of the Arc and Mnt repressor family. Journal of Molecular Biology. 211: 5-6. PMID 2299672 DOI: 10.1016/0022-2836(90)90004-6 |
0.528 |
|
| 1990 |
Brown BM, Bowie JU, Sauer RT. Arc repressor is tetrameric when bound to operator DNA. Biochemistry. 29: 11189-95. PMID 2271706 DOI: 10.1021/Bi00503A006 |
0.511 |
|
| 1990 |
Bowie JU, Clarke ND, Pabo CO, Sauer RT. Identification of protein folds: matching hydrophobicity patterns of sequence sets with solvent accessibility patterns of known structures. Proteins. 7: 257-64. PMID 2163535 DOI: 10.1002/Prot.340070307 |
0.561 |
|
| 1989 |
Bowie JU, Sauer RT. Identifying determinants of folding and activity for a protein of unknown structure. Proceedings of the National Academy of Sciences of the United States of America. 86: 2152-6. PMID 2928323 DOI: 10.1073/Pnas.86.7.2152 |
0.576 |
|
| 1989 |
Knight KL, Bowie JU, Vershon AK, Kelley RD, Sauer RT. The Arc and Mnt repressors. A new class of sequence-specific DNA-binding protein. The Journal of Biological Chemistry. 264: 3639-42. PMID 2917965 |
0.713 |
|
| 1989 |
Bowie JU, Sauer RT. Equilibrium dissociation and unfolding of the Arc repressor dimer. Biochemistry. 28: 7139-43. PMID 2819054 DOI: 10.1021/Bi00444A001 |
0.548 |
|
| 1989 |
Bowie JU, Sauer RT. Identification of C-terminal extensions that protect proteins from intracellular proteolysis. The Journal of Biological Chemistry. 264: 7596-602. PMID 2651443 |
0.524 |
|
| 1989 |
Zagorski MG, Bowie JU, Vershon AK, Sauer RT, Patel DJ. NMR studies of Arc repressor mutants: proton assignments, secondary structure, and long-range contacts for the thermostable proline-8----leucine variant of Arc. Biochemistry. 28: 9813-25. PMID 2611267 DOI: 10.1021/Bi00451A041 |
0.757 |
|
| 1987 |
Regan L, Bowie J, Schimmel P. Polypeptide sequences essential for RNA recognition by an enzyme. Science (New York, N.Y.). 235: 1651-3. PMID 2435005 DOI: 10.1126/Science.2435005 |
0.328 |
|
| 1986 |
Vershon AK, Bowie JU, Karplus TM, Sauer RT. Isolation and analysis of arc repressor mutants: evidence for an unusual mechanism of DNA binding. Proteins. 1: 302-11. PMID 3449859 DOI: 10.1002/Prot.340010404 |
0.739 |
|
| 1984 |
Bowie JU, Gray GR. Synthesis and mass spectra of the partially methylated and partially ethylated anhydro-D-mannitol acetates derived by reductive cleavage of permethylated and perethylated Saccharomyces cerevisiae D-mannans. Carbohydrate Research. 129: 87-97. PMID 6432323 DOI: 10.1016/0008-6215(84)85301-X |
0.397 |
|
| 1984 |
Bowie JU, Trescony PV, Gray GR. Analysis of linkage positions in Saccharomyces cerevisiae D-mannans by the reductive-cleavage method. Carbohydrate Research. 125: 301-7. PMID 6367979 DOI: 10.1016/0008-6215(84)85165-4 |
0.453 |
|
| 1984 |
Wright CD, Bowie JU, Nelson RD. Influence of yeast mannan on release of myeloperoxidase by human neutrophils: determination of structural features of mannan required for formation of myeloperoxidase-mannan-neutrophil complexes. Infection and Immunity. 43: 467-71. PMID 6319284 DOI: 10.1128/Iai.43.2.467-471.1984 |
0.346 |
|
| 1983 |
Wright CD, Bowie JU, Gray GR, Nelson RD. Candidacidal activity of myeloperoxidase: mechanisms of inhibitory influence of soluble cell wall mannan. Infection and Immunity. 42: 76-80. PMID 6311754 DOI: 10.1128/Iai.42.1.76-80.1983 |
0.533 |
|
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