Sangyoub Lee, Ph. D. - Publications

Affiliations: 
Chemistry Seoul National University, Seoul, South Korea 

83 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Lee S, Traytak SD, Seki K. Persistent effects of inertia on diffusion-influenced reactions: Theoretical methods and applications. The Journal of Chemical Physics. 159. PMID 37815106 DOI: 10.1063/5.0167010  0.391
2023 Lee S, Traytak SD. Inertial dynamic effects on diffusion-influenced reactions: Approach based on the diffusive Cattaneo system. The Journal of Chemical Physics. 158. PMID 37218697 DOI: 10.1063/5.0147260  0.404
2020 Lee K, Lee S. Interplay of reactive interference and crowding effects in the diffusion-influenced reaction kinetics. The Journal of Chemical Physics. 153: 044129. PMID 32752726 DOI: 10.1063/5.0016269  0.49
2020 Lee K, Sung J, Choi CH, Lee S. Green's function of the Smoluchowski equation with reaction sink: Application to geminate and bulk recombination reactions. The Journal of Chemical Physics. 152: 134102. PMID 32268750 DOI: 10.1063/1.5144269  0.711
2019 Kim M, Choi CH, Lee S. Time-dependent electron transfer rate between geminate ions with strong Coulomb interaction and distance-dependent reactivity. The Journal of Chemical Physics. 150: 214104. PMID 31176314 DOI: 10.1063/1.5085145  0.391
2019 Song S, Park SJ, Kim M, Kim JS, Sung BJ, Lee S, Kim JH, Sung J. Transport dynamics of complex fluids. Proceedings of the National Academy of Sciences of the United States of America. PMID 31175151 DOI: 10.1073/Pnas.1900239116  0.651
2019 Lee S, Kim EE, Nakata H, Lee S, Choi CH. Efficient implementations of analytic energy gradient for mixed-reference spin-flip time-dependent density functional theory (MRSF-TDDFT). The Journal of Chemical Physics. 150: 184111. PMID 31091897 DOI: 10.1063/1.5086895  0.322
2019 Kim M, Kim E, Lee S, Kim JS, Lee S. A New Method for Constant-NPT Molecular Dynamics. The Journal of Physical Chemistry. A. PMID 30715880 DOI: 10.1021/Acs.Jpca.8B09082  0.335
2019 Lee S, Kim E, Lee S, Choi CH. Fast Overlap Evaluations for Nonadiabatic Molecular Dynamics Simulations: Applications to SF-TDDFT and TDDFT. Journal of Chemical Theory and Computation. PMID 30620592 DOI: 10.1021/Acs.Jctc.8B01049  0.338
2018 Lee S, Filatov M, Lee S, Choi CH. Eliminating spin-contamination of spin-flip time dependent density functional theory within linear response formalism by the use of zeroth-order mixed-reference (MR) reduced density matrix. The Journal of Chemical Physics. 149: 104101. PMID 30219009 DOI: 10.1063/1.5044202  0.334
2017 Lee K, Lee S, Choi CH, Lee S. Effects of external electric field and anisotropic long-range reactivity on charge separation probability. The Journal of Chemical Physics. 147: 144111. PMID 29031266 DOI: 10.1063/1.5000882  0.36
2016 Ha J, Kim M, Lee S. Excluded volume effects on the kinetics of diffusion-influenced reversible bimolecular reactions: A + B rlarr2; C + B Bulletin of the Korean Chemical Society. 37: 1397-1400. DOI: 10.1002/Bkcs.10870  0.471
2014 Kim M, Lee S, Kim JH. Concentration effects on the rates of irreversible diffusion-influenced reactions. The Journal of Chemical Physics. 141: 084101. PMID 25172999 DOI: 10.1063/1.4893340  0.504
2013 Son CY, Kim J, Kim JH, Kim JS, Lee S. An accurate expression for the rates of diffusion-influenced bimolecular reactions with long-range reactivity. The Journal of Chemical Physics. 138: 164123. PMID 23635127 DOI: 10.1063/1.4802584  0.774
2013 Lee S, Choi CH, Kim E, Choi YK. A Variant of the Brillouin-Wigner Perturbation Theory with Epstein-Nesbet Partitioning Bulletin of the Korean Chemical Society. 34: 3279-3283. DOI: 10.5012/Bkcs.2013.34.11.3279  0.391
2012 Lee S, Kim JH, Lee S. Internal Diffusion-Controlled Enzyme Reaction: The Acetylcholinesterase Kinetics. Journal of Chemical Theory and Computation. 8: 715-23. PMID 26596618 DOI: 10.1021/Ct2006727  0.399
2012 Lim Y, Park S, Lee S, Sung J. Nonclassical Chemical Kinetics for Description of Chemical Fluctuation in a Dynamically Heterogeneous Biological System Bulletin of the Korean Chemical Society. 33: 963-970. DOI: 10.5012/Bkcs.2012.33.3.963  0.718
2012 Lee J, Lee W, Park H, Lee S. Calculation of the Absolute Rate of Human Cu/Zn Superoxide Dismutases from Atomic-Level Molecular Dynamics Simulations Bulletin of the Korean Chemical Society. 33: 862-868. DOI: 10.5012/Bkcs.2012.33.3.862  0.43
2011 Son CY, Lee S. Effects of the interaction potential and hydrodynamic interaction on the diffusion-influenced reaction rates. The Journal of Chemical Physics. 135: 224512. PMID 22168708 DOI: 10.1063/1.3665415  0.771
2011 Chong SH, Son CY, Lee S. Zwanzig-Mori equation for the time-dependent pair distribution function. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 041201. PMID 21599146 DOI: 10.1103/Physreve.83.041201  0.719
2011 Lee S, Son CY, Sung J, Chong SH. Communication: Propagator for diffusive dynamics of an interacting molecular pair. The Journal of Chemical Physics. 134: 121102. PMID 21456635 DOI: 10.1063/1.3565476  0.79
2011 Lee W, Kim J, Lee S, March R, April A. Inertial Dynamic Effect on the Rates of Diffusion-Controlled Ligand-Receptor Reactions † Bulletin of the Korean Chemical Society. 32: 2973-2977. DOI: 10.5012/Bkcs.2011.32.8.2973  0.429
2009 Kim JH, Lee S, Lee J, Lee S. Kinetics of collision-induced reactions between hard-sphere reactants. The Journal of Chemical Physics. 131: 164503. PMID 19894952 DOI: 10.1063/1.3251144  0.533
2009 Kim JH, Lee S. A rigorous foundation of the diffusion-influenced bimolecular reaction kinetics. The Journal of Chemical Physics. 131: 014503. PMID 19586106 DOI: 10.1063/1.3158469  0.546
2009 Kang A, Kim JH, Lee S, Park H. Diffusion-influenced reactions involving a reactant with two active sites. The Journal of Chemical Physics. 130: 094507. PMID 19275409 DOI: 10.1063/1.3082010  0.504
2008 Kim JH, Lee W, Sung J, Lee S. Excluded volume effects on the intrachain reaction kinetics. The Journal of Physical Chemistry. B. 112: 6250-8. PMID 18419166 DOI: 10.1021/Jp076426I  0.704
2008 Kim JH, Lee S. Theory of non-Markovian rate processes. The Journal of Physical Chemistry. B. 112: 577-84. PMID 17935319 DOI: 10.1021/Jp075099B  0.487
2007 Eun C, Kim JH, Lee J, Bae JH, Lim YR, Lee S, Sung J. Mean first passage time for the contact between the ends of a chain polymer. The Journal of Physical Chemistry. B. 111: 10468-73. PMID 17696522 DOI: 10.1021/Jp071640S  0.68
2007 Kim J, Huh D, Lee J, Lee S, Sung J, Seki K, Tachiya M. Subdiffusion-assisted reaction kinetics in disordered media Journal of Physics: Condensed Matter. 19: 065116. DOI: 10.1088/0953-8984/19/6/065116  0.717
2006 Uhm J, Lee J, Eun C, Lee S. Generalization of Wilemski-Fixman-Weiss decoupling approximation to the case involving multiple sinks of different sizes, shapes, and reactivities. The Journal of Chemical Physics. 125: 054911. PMID 16942261 DOI: 10.1063/1.2232226  0.382
2006 Uhm J, Lee J, Eun C, Lee S. Diffusion-Controlled Reactions Involving a Reactant with Two Reaction Sites: Evaluation of the Utility of Wilemski-Fixman Closure Approximation Bulletin of the Korean Chemical Society. 27: 1181-1185. DOI: 10.5012/Bkcs.2006.27.8.1181  0.477
2006 Lee J, Uhm J, Lee W, Lee S, Sung J. Reversible excited-state proton transfer : Effect of the switching of interaction potential by reaction Bulletin of the Korean Chemical Society. 27: 197-202. DOI: 10.5012/Bkcs.2006.27.2.197  0.662
2005 Lee J, Uhm J, Lee W, Lee S, Sung J. Nonequilibrium distribution function theory of many-particle effects in the reversible reactions of the type A+B ↔ C+B Bulletin of the Korean Chemical Society. 26: 1986-1990. DOI: 10.5012/Bkcs.2005.26.12.1986  0.684
2005 Huh D, Lee J, Lee S. Fractional diffusion equation approach to the anomalous diffusion on fractal lattices Bulletin of the Korean Chemical Society. 26: 1723-1727. DOI: 10.5012/Bkcs.2005.26.11.1723  0.416
2004 Kim JH, Lee S. The optimized Rouse-Zimm theory of excluded volume effects on chain dynamics. The Journal of Chemical Physics. 121: 12640-9. PMID 15606289 DOI: 10.1063/1.1822911  0.444
2004 Lee J, Yang S, Kim J, Lee S. An efficient molecular dynamics simulation method for calculating the diffusion-influenced reaction rates. The Journal of Chemical Physics. 120: 7564-75. PMID 15267669 DOI: 10.1063/1.1687680  0.523
2004 Park PJ, Lee S. Diffusion-Controlled Reaction between Polymers and Receptors on Membranes Journal of the Korean Physical Society. 44: 584-588. DOI: 10.3938/Jkps.44.584  0.355
2003 Sung J, Park PJ, Lee J, Lee W, Kim J, Lee S. Diffusion-influenced kinetics of reactions involving polymers Bulletin of the Korean Chemical Society. 24: 843-852. DOI: 10.5012/Bkcs.2003.24.6.843  0.718
2003 Kim J, Lee S. Effects of chain stiffness on the quenching of an excited polymer by small quenchers Journal of Chemical Physics. 119: 11957-11970. DOI: 10.1063/1.1624056  0.337
2003 Park PJ, Lee S. Quenching of an excitation moving on a flexible polymer Journal of Chemical Physics. 118: 1514-1520. DOI: 10.1063/1.1529191  0.406
2003 Sung J, Lee J, Lee S. Theory of intrapolymer excimer-formation kinetics Journal of Chemical Physics. 118: 414-424. DOI: 10.1063/1.1525801  0.722
2002 Park H, Seh J, Lee S. Theoretical Evaluation of the Electrophilic Catalyses in Successive Enolization and Reketonization Reactions by Δ 5 -3-Ketosteroid Isomerase Bulletin of the Korean Chemical Society. 23: 837-845. DOI: 10.5012/Bkcs.2002.23.6.837  0.418
2002 Sung J, Barkai E, Silbey RJ, Lee S. Fractional dynamics approach to diffusion-assisted reactions in disordered media Journal of Chemical Physics. 116: 2338-2341. DOI: 10.1063/1.1448294  0.745
2001 Sung J, Park H, Lee S. Green's Function Approach to Nonclassical Reaction Kinetics in Fractal Media Physical Review Letters. 86: 2463-2466. PMID 11289955 DOI: 10.1103/Physrevlett.86.2463  0.709
2001 Park PJ, Lee S. Diffusion-influenced reversible energy transfer reactions between polymers Journal of Chemical Physics. 115: 9594-9600. DOI: 10.1063/1.1413968  0.454
2001 Sung J, Lee S. Intrachain fluorescence quenching in a flexible polymer: A theory for frequency-domain fluorometric experiments Journal of Chemical Physics. 115: 9050-9054. DOI: 10.1063/1.1411992  0.649
2001 Yang S, Han aH, Lee S. An Efficient Brownian Dynamics Method for Evaluating Inertial Dynamic Effects on Diffusion-Influenced Reactions Journal of Physical Chemistry B. 105: 6017-6024. DOI: 10.1021/Jp0102419  0.438
2000 Sung J, Lee S. Relations among the modern theories of diffusion-influenced reactions. II. Reduced distribution function theory versus modified integral encounter theory The Journal of Chemical Physics. 112: 2128-2138. DOI: 10.1063/1.480780  0.723
2000 Lee J, Sung J, Lee S. Excluded volume effects on the diffusion-influenced reaction: The many-particle kernel approach Journal of Chemical Physics. 113: 8686-8692. DOI: 10.1063/1.1318738  0.732
2000 Park H, Suh J, Lee S. Ab Initio Studies on the Catalytic Mechanism of Aspartic Proteinases:  Nucleophilic versus General Acid/General Base Mechanism Journal of the American Chemical Society. 122: 3901-3908. DOI: 10.1021/Ja992849P  0.383
1999 Sung J, Lee S. Relations among the modern theories of diffusion-influenced reactions. I. Reduced distribution function theory versus memory function theory of Yang, Lee, and Shin Journal of Chemical Physics. 111: 10159-10170. DOI: 10.1063/1.480366  0.722
1999 Yang S, Kim J, Lee S. An efficient Brownian dynamics method for calculating the time-dependent rate coefficients of diffusion-influenced reactions Journal of Chemical Physics. 111: 10119-10125. DOI: 10.1063/1.480363  0.43
1999 Sung J, Lee S. Nonequilibrium distribution function formalism for diffusion-influenced bimolecular reactions: Beyond the superposition approximation The Journal of Chemical Physics. 111: 796-803. DOI: 10.1063/1.479367  0.734
1999 Sung J, Chi J, Lee S. Nonequilibrium distribution function theory of diffusion-influenced reversible energy-transfer reactions Journal of Chemical Physics. 111: 804-815. DOI: 10.1063/1.479198  0.731
1998 Sung J, Shin KJ, Lee S. Relaxation kinetics of diffusion-influenced reactions of the type A+B⇄C perturbed by flash photolysis The Journal of Chemical Physics. 109: 9101-9116. DOI: 10.1063/1.477466  0.734
1998 Choi J, Kim H, Lee S. Correlation dimension as a measure of surface roughness of protein molecules The Journal of Chemical Physics. 109: 7001-7004. DOI: 10.1063/1.477336  0.301
1998 Yang M, Lee S, Shin KJ. Kinetic theory of bimolecular reactions in liquid. III. Reversible association–dissociation: A+B⇄C The Journal of Chemical Physics. 108: 9069-9085. DOI: 10.1063/1.476353  0.514
1998 Yang M, Lee S, Shin KJ. Kinetic theory of bimolecular reactions in liquid. II. Reversible reaction A+B⇄C+B The Journal of Chemical Physics. 108: 8557-8571. DOI: 10.1063/1.476285  0.526
1998 Yang M, Lee S, Shin KJ. Kinetic theory of bimolecular reactions in liquid. I. Steady-state fluorescence quenching kinetics The Journal of Chemical Physics. 108: 117-133. DOI: 10.1063/1.475368  0.449
1997 Yang M, Lee S, Shin KJ. Power Law Behavior In The Asymptotic Relaxation Of Reversible Diffusion-Influenced Reaction A + B Ab Perturbed By Photolysis Physical Review Letters. 79: 3783-3786. DOI: 10.1103/Physrevlett.79.3783  0.411
1997 Jung Y, Hyeon C, Shin S, Lee S. Effects of a quantum-mechanically driven two-state gating mode on the diffusion-influenced bimolecular reactions The Journal of Chemical Physics. 107: 9864-9877. DOI: 10.1063/1.475284  0.72
1997 Sung J, Shin KJ, Lee S. Many-particle effects on the relaxation kinetics of fast reversible reactions of the type A+B⇄C The Journal of Chemical Physics. 107: 9418-9436. DOI: 10.1063/1.475239  0.729
1997 Jung Y, Lee S. Excluded Volume Effect on the Diffusion-Influenced Bimolecular Reactions The Journal of Physical Chemistry A. 101: 5255-5261. DOI: 10.1021/Jp9706240  0.602
1996 Kim H, Shin S, Lee S, Shin KJ. Monte Carlo simulation study of recombination dynamics in solution The Journal of Chemical Physics. 105: 7705-7711. DOI: 10.1063/1.472553  0.408
1996 Kim J, Jung Y, Jeon J, Shin KJ, Lee S. Diffusion‐influenced radical recombination in the presence of a scavenger The Journal of Chemical Physics. 104: 5784-5797. DOI: 10.1063/1.471310  0.591
1995 Jang S, Shin KJ, Lee S. Effects of excitation migration and translational diffusion in the luminescence quenching dynamics The Journal of Chemical Physics. 102: 815-827. DOI: 10.1063/1.469196  0.418
1994 Sung J, Shin KJ, Lee S. Effect of light intensity on the fluorescence quenching kinetics probed by frequency‐domain fluorometry The Journal of Chemical Physics. 101: 7241-7247. DOI: 10.1063/1.468281  0.64
1994 Jung Y, Lee S. Equivalence of the radical recombination rate theories of Waite and Szabo Chemical Physics Letters. 231: 429-438. DOI: 10.1016/0009-2614(94)01282-2  0.569
1992 Lee S, Karplus M. Erratum: Kinetics of diffusion‐influenced bimolecular reactions in solution. I. General formalism and relaxation kinetics of fast reversible reactions [J. Chem. Phys. 86, 1883 (1987)] The Journal of Chemical Physics. 96: 1663-1663. DOI: 10.1063/1.462914  0.574
1991 Lee S, Yang M, Shin KJ, Choo KY, Lee D. Theory of diffusion-influenced fluorescence quenching: Dependence of the Stern-Volmer curve on light intensity Chemical Physics. 156: 339-357. DOI: 10.1016/0301-0104(91)89003-S  0.369
1991 Kim D, Lee S. Theory of multidimensional barrier crossing processes in highly viscous medium: reaction path Smoluchowski equation approach Chemical Physics Letters. 177: 139-145. DOI: 10.1016/0009-2614(91)90059-I  0.475
1989 Borgis DC, Lee S, Hynes JT. A dynamical theory of nonadiabatic proton and hydrogen atom transfer reaction rates in solution Chemical Physics Letters. 162: 19-26. DOI: 10.1016/0009-2614(89)85059-6  0.519
1988 Lee S, Hynes JT. Solution reaction path Hamiltonian for reactions in polar solvents. II. Applications Journal of Chemical Physics. 88: 6853-6862. DOI: 10.1063/1.454383  0.632
1988 Gertner BJ, Wilson KR, Zichi DA, Lee S, Hynes JT. Non-equilibrium solvation in SN1 and SN2 reactions in polar solvents Faraday Discussions of the Chemical Society. 85: 297-308. DOI: 10.1039/Dc9888500297  0.643
1988 Lee S, Karplus M. Dynamics of reactions involving diffusive multidimensional barrier crossing The Journal of Physical Chemistry. 92: 1075-1086. DOI: 10.1021/J100316A018  0.562
1988 Lee S, Hynes JT. Solution reaction path Hamiltonian for reactions in polar solvents. II. Applications The Journal of Chemical Physics. 88: 6863-6869.  0.517
1987 Lee SY, Karplus M, Bashford D, Weaver D. Brownian dynamics simulation of protein folding: a study of the diffusion-collision model. Biopolymers. 26: 481-506. PMID 3567323 DOI: 10.1002/Bip.360260404  0.533
1987 Lee S, Karplus M. Kinetics of diffusion‐influenced bimolecular reactions in solution. II. Effects of the gating mode and orientation‐dependent reactivity The Journal of Chemical Physics. 86: 1904-1921. DOI: 10.1063/1.452757  0.605
1987 Gertner BJ, Bergsma JP, Wilson KR, Lee S, Hynes JT. Nonadiabatic solvation model for SN2 reactions in polar solvents Journal of Chemical Physics. 86: 1377-1386. DOI: 10.1063/1.452225  0.644
1987 Lee S, Karplus M. Kinetics of diffusion‐influenced bimolecular reactions in solution. I. General formalism and relaxation kinetics of fast reversible reactions The Journal of Chemical Physics. 86: 1883-1903. DOI: 10.1063/1.452140  0.626
1987 Gertner BJ, Bergsma JP, Wilson KR, Lee S, Hynes JT. Nonadiabatic solvation model for SN2 reactions in polar solvents The Journal of Chemical Physics. 86: 1377-1386.  0.489
1984 Bashford D, Weaver DL, Lee S, Karplus M. Dynamics of protein folding Acta Crystallographica Section a Foundations of Crystallography. 40: C21-C22. DOI: 10.1107/S0108767384099165  0.326
1984 Lee S, Karplus M. Brownian dynamics simulations: Statistical error of correlation functions The Journal of Chemical Physics. 81: 6106-6118. DOI: 10.1063/1.447563  0.509
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