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Jean-Paul Armache, Ph.D. - Publications

Affiliations: 
2001-2006 Technical University of Lodz 
 2007-2013 Chemistry and Pharmacy Ludwig-Maximilians-Universität München, München, Bayern, Germany 
 2013-2018 Biochemistry and Biophysics University of California San Francisco, CA, USA 
 2019- Biochemistry and Molecular Biology Pennsylvania State University, State College, PA, United States 
Area:
Structural biology, cryo-EM, chromatin, translation, ribosome, nucleosome, membrane proteins, nociception, transcription
Website:
https://www.armachelab.psu.edu
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chio US, Palovcak E, Smith AAA, Autzen H, Muñoz EN, Yu Z, Wang F, Agard DA, Armache JP, Narlikar GJ, Cheng Y. Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking. Nature Communications. 15: 2225. PMID 38472177 DOI: 10.1038/s41467-024-46178-y  0.766
2023 Chio US, Palovcak E, Autzen AAA, Autzen HE, Muñoz EN, Yu Z, Wang F, Agard DA, Armache JP, Narlikar GJ, Cheng Y. Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking. Biorxiv : the Preprint Server For Biology. PMID 37546986 DOI: 10.1101/2023.06.20.545796  0.766
2023 Chio US, Rechiche O, Bryll AR, Zhu J, Leith EM, Feldman JL, Peterson CL, Tan S, Armache JP. Cryo-EM structure of the human Sirtuin 6-nucleosome complex. Science Advances. 9: eadf7586. PMID 37058572 DOI: 10.1126/sciadv.adf7586  0.731
2023 Chio US, Rechiche O, Bryll AR, Zhu J, Feldman JL, Peterson CL, Tan S, Armache JP. Cryo-EM structure of the human Sirtuin 6-nucleosome complex. Biorxiv : the Preprint Server For Biology. PMID 36993468 DOI: 10.1101/2023.03.17.533206  0.731
2019 Armache JP, Cheng Y. Single-particle cryo-EM: beyond the resolution. National Science Review. 6: 864-866. PMID 31867130 DOI: 10.1093/Nsr/Nwz127  0.494
2019 Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ. Cryo-EM of multiple cage architectures reveals a universal mode of clathrin self-assembly. Nature Structural & Molecular Biology. 26: 890-898. PMID 31582853 DOI: 10.1038/S41594-019-0292-0  0.616
2019 Armache JP, Gamarra N, Johnson SL, Leonard JD, Wu S, Narlikar GJ, Cheng Y. Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome. Elife. 8. PMID 31210637 DOI: 10.7554/eLife.46057  0.579
2019 Armache JP, Gamarra N, Johnson SL, Leonard JD, Wu S, Narlikar GJ, Cheng Y. Author response: Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome Elife. DOI: 10.7554/Elife.46057.046  0.49
2018 Kintzer AF, Green EM, Dominik PK, Bridges M, Armache JP, Deneka D, Kim SS, Hubbell W, Kossiakoff AA, Cheng Y, Stroud RM. Structural basis for activation of voltage sensor domains in an ion channel TPC1. Proceedings of the National Academy of Sciences of the United States of America. PMID 30190435 DOI: 10.1073/pnas.1805651115  0.626
2018 Heymann JB, Marabini R, Kazemi M, Sorzano COS, Holmdahl M, Mendez JH, Stagg SM, Jonic S, Palovcak E, Armache JP, Zhao J, Cheng Y, Pintilie G, Chiu W, Patwardhan A, et al. The First Single Particle Analysis Map Challenge: A Summary of the Assessments. Journal of Structural Biology. PMID 30114512 DOI: 10.1016/J.Jsb.2018.08.010  0.669
2018 Nguyen NX, Armache JP, Lee C, Yang Y, Zeng W, Mootha VK, Cheng Y, Bai XC, Jiang Y. Author Correction: Cryo-EM structure of a fungal mitochondrial calcium uniporter. Nature. PMID 30108362 DOI: 10.1038/S41586-018-0427-1  0.485
2018 Nguyen NX, Armache JP, Lee C, Yang Y, Zeng W, Mootha VK, Cheng Y, Bai XC, Jiang Y. Cryo-EM structure of a fungal mitochondrial calcium uniporter. Nature. PMID 29995855 DOI: 10.1038/S41586-018-0333-6  0.558
2017 Zheng SQ, Palovcak E, Armache JP, Verba KA, Cheng Y, Agard DA. MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy. Nature Methods. PMID 28250466 DOI: 10.1038/Nmeth.4193  0.515
2016 Frauenfeld J, Löving R, Armache JP, Sonnen AF, Guettou F, Moberg P, Zhu L, Jegerschöld C, Flayhan A, Briggs JA, Garoff H, Löw C, Cheng Y, Nordlund P. A saposin-lipoprotein nanoparticle system for membrane proteins. Nature Methods. PMID 26950744 DOI: 10.1038/Nmeth.3801  0.575
2015 Wu S, Armache JP, Cheng Y. Single-particle cryo-EM data acquisition by using direct electron detection camera. Microscopy (Oxford, England). PMID 26546989 DOI: 10.1093/Jmicro/Dfv355  0.502
2015 Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D. Structure of the TRPA1 ion channel suggests regulatory mechanisms. Nature. 525: 552. PMID 26200340 DOI: 10.1038/Nature14871  0.464
2015 Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D. Structure of the TRPA1 ion channel suggests regulatory mechanisms. Nature. 520: 511-7. PMID 25855297 DOI: 10.1038/Nature14367  0.554
2014 Gogala M, Becker T, Beatrix B, Armache JP, Barrio-Garcia C, Berninghausen O, Beckmann R. Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion. Nature. 506: 107-10. PMID 24499919 DOI: 10.1038/Nature12950  0.631
2014 Leonard JD, Armache J, Naber N, Wu S, Pate E, Cooke R, Cheng Y, Narlikar GJ. The Mechanism of Nucleosome Spacing by a Dimeric Chromatin Remodeling Enzyme Biophysical Journal. 106: 69a-70a. DOI: 10.1016/J.Bpj.2013.11.461  0.566
2013 Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R. Structures of the human and Drosophila 80S ribosome. Nature. 497: 80-5. PMID 23636399 DOI: 10.1038/Nature12104  0.627
2013 Armache JP, Anger AM, Márquez V, Franckenberg S, Fröhlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN. Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution. Nucleic Acids Research. 41: 1284-93. PMID 23222135 DOI: 10.1093/Nar/Gks1259  0.622
2012 Grela P, Gajda MJ, Armache JP, Beckmann R, Krokowski D, Svergun DI, Grankowski N, Tchórzewski M. Solution structure of the natively assembled yeast ribosomal stalk determined by small-angle X-ray scattering. The Biochemical Journal. 444: 205-9. PMID 22458705 DOI: 10.1042/Bj20120115  0.587
2012 Becker T, Franckenberg S, Wickles S, Shoemaker CJ, Anger AM, Armache JP, Sieber H, Ungewickell C, Berninghausen O, Daberkow I, Karcher A, Thomm M, Hopfner KP, Green R, Beckmann R. Structural basis of highly conserved ribosome recycling in eukaryotes and archaea. Nature. 482: 501-6. PMID 22358840 DOI: 10.1038/Nature10829  0.6
2012 Jarasch A, Dziuk P, Becker T, Armache JP, Hauser A, Wilson DN, Beckmann R. The DARC site: a database of aligned ribosomal complexes. Nucleic Acids Research. 40: D495-500. PMID 22009674 DOI: 10.1093/Nar/Gkr824  0.651
2011 Becker T, Armache JP, Jarasch A, Anger AM, Villa E, Sieber H, Motaal BA, Mielke T, Berninghausen O, Beckmann R. Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome. Nature Structural & Molecular Biology. 18: 715-20. PMID 21623367 DOI: 10.1038/Nsmb.2057  0.624
2011 Márquez V, Fröhlich T, Armache JP, Sohmen D, Dönhöfer A, Mikolajka A, Berninghausen O, Thomm M, Beckmann R, Arnold GJ, Wilson DN. Proteomic characterization of archaeal ribosomes reveals the presence of novel archaeal-specific ribosomal proteins. Journal of Molecular Biology. 405: 1215-32. PMID 21134383 DOI: 10.1016/J.Jmb.2010.11.055  0.578
2010 Armache JP, Jarasch A, Anger AM, Villa E, Becker T, Bhushan S, Jossinet F, Habeck M, Dindar G, Franckenberg S, Marquez V, Mielke T, Thomm M, Berninghausen O, Beatrix B, et al. Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution. Proceedings of the National Academy of Sciences of the United States of America. 107: 19748-53. PMID 20980660 DOI: 10.1073/Pnas.1009999107  0.643
2010 Armache JP, Jarasch A, Anger AM, Villa E, Becker T, Bhushan S, Jossinet F, Habeck M, Dindar G, Franckenberg S, Marquez V, Mielke T, Thomm M, Berninghausen O, Beatrix B, et al. Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome. Proceedings of the National Academy of Sciences of the United States of America. 107: 19754-9. PMID 20974910 DOI: 10.1073/Pnas.1010005107  0.583
2010 Gartmann M, Blau M, Armache JP, Mielke T, Topf M, Beckmann R. Mechanism of eIF6-mediated inhibition of ribosomal subunit joining. The Journal of Biological Chemistry. 285: 14848-51. PMID 20356839 DOI: 10.1074/Jbc.C109.096057  0.618
2010 Bhushan S, Gartmann M, Halic M, Armache JP, Jarasch A, Mielke T, Berninghausen O, Wilson DN, Beckmann R. alpha-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel. Nature Structural & Molecular Biology. 17: 313-7. PMID 20139981 DOI: 10.1038/Nsmb.1756  0.591
2009 Seidelt B, Innis CA, Wilson DN, Gartmann M, Armache JP, Villa E, Trabuco LG, Becker T, Mielke T, Schulten K, Steitz TA, Beckmann R. Structural insight into nascent polypeptide chain-mediated translational stalling. Science (New York, N.Y.). 326: 1412-5. PMID 19933110 DOI: 10.1126/Science.1177662  0.565
2009 Becker T, Bhushan S, Jarasch A, Armache JP, Funes S, Jossinet F, Gumbart J, Mielke T, Berninghausen O, Schulten K, Westhof E, Gilmore R, Mandon EC, Beckmann R. Structure of monomeric yeast and mammalian Sec61 complexes interacting with the translating ribosome. Science (New York, N.Y.). 326: 1369-73. PMID 19933108 DOI: 10.1126/Science.1178535  0.758
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