| Year |
Citation |
Score |
| 2020 |
Overeem NJ, Hamming PHE, Grant OC, Di Iorio D, Tieke M, Bertolino MC, Li Z, Vos G, de Vries RP, Woods RJ, Tito NB, Boons GPH, van der Vries E, Huskens J. Hierarchical Multivalent Effects Control Influenza Host Specificity. Acs Central Science. 6: 2311-2318. PMID 33376792 DOI: 10.1021/acscentsci.0c01175 |
0.636 |
|
| 2020 |
Grant OC, Montgomery D, Ito K, Woods RJ. Analysis of the SARS-CoV-2 spike protein glycan shield reveals implications for immune recognition. Scientific Reports. 10: 14991. PMID 32929138 DOI: 10.1038/S41598-020-71748-7 |
0.365 |
|
| 2020 |
Zhao P, Praissman JL, Grant OC, Cai Y, Xiao T, Rosenbalm KE, Aoki K, Kellman BP, Bridger R, Barouch DH, Brindley MA, Lewis NE, Tiemeyer M, Chen B, Woods RJ, et al. Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor. Cell Host & Microbe. PMID 32841605 DOI: 10.1016/J.Chom.2020.08.004 |
0.381 |
|
| 2020 |
Kim SY, Jin W, Sood A, Montgomery DW, Grant OC, Fuster MM, Fu L, Dordick JS, Woods RJ, Zhang F, Linhardt RJ. Characterization of heparin and severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) spike glycoprotein binding interactions. Antiviral Research. 104873. PMID 32653452 DOI: 10.1016/J.Antiviral.2020.104873 |
0.352 |
|
| 2020 |
Meredith RJ, Woods RJ, Carmichael I, Serianni AS. Reconciling MA'AT and molecular dynamics models of linkage conformation in oligosaccharides. Physical Chemistry Chemical Physics : Pccp. PMID 32597425 DOI: 10.1039/D0Cp01389G |
0.303 |
|
| 2020 |
Mandalasi M, Kim HW, Thieker D, Sheikh MO, Gas-Pascual E, Rahman K, Zhao P, Daniel NG, van der Wel H, Ichikawa HT, Glushka JN, Wells L, Woods RJ, Wood ZA, West CM. A terminal α3-galactose modification regulates an E3 ubiquitin ligase subunit in Toxoplasma gondii. The Journal of Biological Chemistry. PMID 32414843 DOI: 10.1074/Jbc.Ra120.013792 |
0.317 |
|
| 2020 |
Tang M, Wang X, Gandhi NS, Foley BL, Burrage K, Woods RJ, Gu Y. Effect of Hydroxylysine-O-glycosylation on the structure of type I collagen molecule: A computational study. Glycobiology. PMID 32188979 DOI: 10.1093/Glycob/Cwaa026 |
0.311 |
|
| 2019 |
Chalmers GR, Eletsky A, Morris LC, Yang JY, Tian F, Woods RJ, Moremen KW, Prestegard JH. NMR Resonance Assignment Methodology: Characterizing Large Sparsely Labeled Glycoproteins. Journal of Molecular Biology. PMID 31034888 DOI: 10.1016/J.Jmb.2019.04.029 |
0.307 |
|
| 2019 |
Zhang W, Meredith R, Yoon MK, Wang X, Woods RJ, Carmichael I, Serianni AS. Synthesis and O-Glycosidic Linkage Conformational Analysis of 13C-Labeled Oligosaccharide Fragments of an Antifreeze Glycolipid. The Journal of Organic Chemistry. PMID 30624062 DOI: 10.1021/Acs.Joc.8B01411 |
0.321 |
|
| 2019 |
Zhang W, Meredith R, Pan Q, Wang X, Woods RJ, Carmichael I, Serianni AS. Use of Circular Statistics To Model αMan-(1→2)-αMan and αMan-(1→3)-α/βMan O-Glycosidic Linkage Conformation in 13C-Labeled Disaccharides and High-Mannose Oligosaccharides. Biochemistry. PMID 30605318 DOI: 10.1021/Acs.Biochem.8B01050 |
0.309 |
|
| 2018 |
Nemanichvili N, Tomris I, Turner HL, McBride R, Grant OC, van der Woude R, Aldosari MH, Pieters RJ, Woods RJ, Paulson JC, Boons GJ, Ward AB, Verheije MH, de Vries RP. Fluorescent Trimeric Hemagglutinins Reveal Multivalent Receptor Binding Properties. Journal of Molecular Biology. PMID 30597163 DOI: 10.1016/J.Jmb.2018.12.014 |
0.678 |
|
| 2018 |
Ji Y, Woods RJ. Quantifying Weak Glycan-Protein Interactions Using a Biolayer Interferometry Competition Assay: Applications to ECL Lectin and X-31 Influenza Hemagglutinin. Advances in Experimental Medicine and Biology. 1104: 259-273. PMID 30484253 DOI: 10.1007/978-981-13-2158-0_13 |
0.305 |
|
| 2018 |
Ingemann Nielsen M, Stegmayr J, Grant OC, Yang Z, Nilsson UJ, Boos I, Carlsson MC, Woods RJ, Unverzagt C, Leffler H, Wandall HH. Galectin binding to cells and glycoproteins with genetically modified glycosylation reveals galectin-glycan specificities in a natural context. The Journal of Biological Chemistry. PMID 30385505 DOI: 10.1074/Jbc.Ra118.004636 |
0.358 |
|
| 2018 |
Woods RJ. Predicting the Structures of Glycans, Glycoproteins, and Their Complexes. Chemical Reviews. PMID 30091597 DOI: 10.1021/Acs.Chemrev.8B00032 |
0.352 |
|
| 2018 |
Thieker DF, Xu Y, Chapla D, Nora C, Qiu H, Felix T, Wang L, Moremen KW, Liu J, Esko JD, Woods RJ. Downstream Products are Potent Inhibitors of the Heparan Sulfate 2-O-Sulfotransferase. Scientific Reports. 8: 11832. PMID 30087361 DOI: 10.1038/S41598-018-29602-4 |
0.31 |
|
| 2018 |
Sood A, Gerlits OO, Ji Y, Bovin N, Coates L, Woods RJ. Defining the specificity of carbohydrate-protein interactions by quantifying functional group contributions. Journal of Chemical Information and Modeling. PMID 30086239 DOI: 10.1021/Acs.Jcim.8B00120 |
0.4 |
|
| 2018 |
Amon R, Grant OC, Leviatan Ben-Arye S, Makeneni S, Nivedha AK, Marshanski T, Norn C, Yu H, Glushka JN, Fleishman SJ, Chen X, Woods RJ, Padler-Karavani V. A combined computational-experimental approach to define the structural origin of antibody recognition of sialyl-Tn, a tumor-associated carbohydrate antigen. Scientific Reports. 8: 10786. PMID 30018351 DOI: 10.1038/S41598-018-29209-9 |
0.308 |
|
| 2018 |
Zhao Y, Yang JY, Thieker DF, Xu Y, Zong C, Boons GJ, Liu J, Woods RJ, Moremen KW, Amster IJ. A Traveling Wave Ion Mobility Spectrometry (TWIMS) Study of the Robo1-Heparan Sulfate Interaction. Journal of the American Society For Mass Spectrometry. PMID 29520710 DOI: 10.1007/S13361-018-1903-4 |
0.34 |
|
| 2018 |
Peng W, Bouwman KM, McBride R, Grant OC, Woods RJ, Verheije MH, Paulson JC, de Vries RP. Enhanced human-type receptor binding by ferret transmissible H5N1 with a K193T mutation. Journal of Virology. PMID 29491160 DOI: 10.1128/Jvi.02016-17 |
0.664 |
|
| 2018 |
Makeneni S, Thieker D, Woods RJ. Applying pose clustering and MD simulations to eliminate false positives in molecular docking. Journal of Chemical Information and Modeling. PMID 29431438 DOI: 10.1021/Acs.Jcim.7B00588 |
0.327 |
|
| 2017 |
Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM. O2 sensing associated glycosylation exposes the F-box combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. The Journal of Biological Chemistry. PMID 28928219 DOI: 10.1074/Jbc.M117.809160 |
0.302 |
|
| 2017 |
Gerlits OO, Coates L, Woods RJ, Kovalevsky AY. Mannobiose binding induces changes in hydrogen bonding and protonation states of acidic residues in concanavalin A as revealed by neutron crystallography. Biochemistry. PMID 28846383 DOI: 10.1021/Acs.Biochem.7B00654 |
0.345 |
|
| 2017 |
Ji Y, White YJ, Hadden JA, Grant OC, Woods RJ. New insights into influenza A specificity: an evolution of paradigms. Current Opinion in Structural Biology. 44: 219-231. PMID 28675835 DOI: 10.1016/J.Sbi.2017.06.001 |
0.762 |
|
| 2017 |
de Vries RP, Peng W, Grant OC, Thompson AJ, Zhu X, Bouwman KM, de la Pena ATT, van Breemen MJ, Ambepitiya Wickramasinghe IN, de Haan CAM, Yu W, McBride R, Sanders RW, Woods RJ, Verheije MH, et al. Three mutations switch H7N9 influenza to human-type receptor specificity. Plos Pathogens. 13: e1006390. PMID 28617868 DOI: 10.1371/Journal.Ppat.1006390 |
0.641 |
|
| 2017 |
Hopper JTS, Ambrose S, Grant OC, Krumm SA, Allison TM, Degiacomi MT, Tully MD, Pritchard LK, Ozorowski G, Ward AB, Crispin M, Doores KJ, Woods RJ, Benesch JLP, Robinson CV, et al. The Tetrameric Plant Lectin BanLec Neutralizes HIV through Bidentate Binding to Specific Viral Glycans. Structure (London, England : 1993). PMID 28434916 DOI: 10.1016/J.Str.2017.03.015 |
0.328 |
|
| 2017 |
Zhang W, Turney T, Meredith R, Pan Q, Sernau L, Wang X, Hu X, Woods RJ, Carmichael I, Serianni AS. Conformational Populations of β-(1→4) O-Glycosidic Linkages Using Redundant NMR J-Couplings and Circular Statistics. The Journal of Physical Chemistry. B. PMID 28296420 DOI: 10.1021/Acs.Jpcb.7B02252 |
0.307 |
|
| 2016 |
Singh A, Tessier MB, Pederson K, Wang X, Venot AP, Boons GJ, Prestegard JH, Woods RJ. Extension and validation of the GLYCAM force field parameters for modeling glycosaminoglycans. Canadian Journal of Chemistry. 94: 927-935. PMID 28603292 DOI: 10.1139/Cjc-2015-0606 |
0.335 |
|
| 2016 |
Peng W, de Vries RP, Grant OC, Thompson AJ, McBride R, Tsogtbaatar B, Lee PS, Razi N, Wilson IA, Woods RJ, Paulson JC. Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity. Cell Host & Microbe. PMID 28017661 DOI: 10.1016/J.Chom.2016.11.004 |
0.653 |
|
| 2016 |
Turney T, Pan Q, Sernau L, Carmichael I, Zhang W, Wang X, Woods RJ, Serianni AS. O-Acetyl Side-Chains in Monosaccharides: Redundant NMR Spin-Couplings and Statistical Models for Acetate Ester Conformational Analysis. The Journal of Physical Chemistry. B. PMID 28001427 DOI: 10.1021/Acs.Jpcb.6B10028 |
0.313 |
|
| 2016 |
Zhao Y, Singh A, Xu Y, Zong C, Zhang F, Boons GJ, Liu J, Linhardt RJ, Woods RJ, Amster IJ. Gas-Phase Analysis of the Complex of Fibroblast GrowthFactor 1 with Heparan Sulfate: A Traveling Wave Ion Mobility Spectrometry (TWIMS) and Molecular Modeling Study. Journal of the American Society For Mass Spectrometry. PMID 27663556 DOI: 10.1007/S13361-016-1496-8 |
0.318 |
|
| 2016 |
Thieker DF, Hadden JA, Schulten K, Woods RJ. 3D Implementation of the Symbol Nomenclature for Graphical Representation of Glycans. Glycobiology. PMID 27514939 DOI: 10.1093/Glycob/Cww076 |
0.72 |
|
| 2016 |
Hsieh PH, Thieker DF, Guerrini M, Woods RJ, Liu J. Uncovering the Relationship between Sulphation Patterns and Conformation of Iduronic Acid in Heparan Sulphate. Scientific Reports. 6: 29602. PMID 27412370 DOI: 10.1038/Srep29602 |
0.311 |
|
| 2016 |
Sumer-Bayraktar Z, Grant OC, Venkatakrishnan V, Woods RJ, Packer NH, Thaysen-Andersen M. Asn347-glycosylation of corticosteroid binding globulin fine-tunes the host immune response by modulating proteolysis by P. aeruginosa and neutrophil elastase. The Journal of Biological Chemistry. PMID 27339896 DOI: 10.1074/Jbc.M116.735258 |
0.323 |
|
| 2016 |
Hsu CH, Park S, Mortenson DE, Foley BL, Wang X, Woods RJ, Case DA, Powers ET, Wong CH, Dyson HJ, Kelly JW. The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate. Journal of the American Chemical Society. PMID 27249581 DOI: 10.1021/Jacs.6B02879 |
0.327 |
|
| 2016 |
Khatri K, Klein JA, White MR, Grant OC, Leymarie N, Woods RJ, Hartshorn KL, Zaia J. Integrated omics and computational glycobiology reveal structural basis for Influenza A virus glycan microheterogeneity and host interactions. Molecular & Cellular Proteomics : McP. PMID 26984886 DOI: 10.1074/Mcp.M116.058016 |
0.354 |
|
| 2016 |
Wang X, Woods RJ. Insights into furanose solution conformations: beyond the two-state model. Journal of Biomolecular Nmr. PMID 26968894 DOI: 10.1007/S10858-016-0028-Y |
0.314 |
|
| 2016 |
Grant OC, Tessier MB, Meche L, Mahal LK, Foley BL, Woods RJ. Combining 3D Structure with Glycan Array Data Provides Insight into the Origin of Glycan Specificity. Glycobiology. PMID 26911287 DOI: 10.1093/Glycob/Cww020 |
0.367 |
|
| 2016 |
Chalmers G, Glushka JN, Foley BL, Woods RJ, Prestegard JH. Direct NOE simulation from long MD trajectories. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 265: 1-9. PMID 26826977 DOI: 10.1016/J.Jmr.2016.01.006 |
0.305 |
|
| 2016 |
Nivedha AK, Thieker DF, Hu H, Woods RJ. Vina-Carb: Improving Glycosidic Angles During Carbohydrate Docking. Journal of Chemical Theory and Computation. PMID 26744922 DOI: 10.1021/Acs.Jctc.5B00834 |
0.363 |
|
| 2015 |
Hang I, Lin CW, Grant OC, Fleurkens S, Villiger TK, Soos M, Morbidelli M, Woods RJ, Gauss R, Aebi M. Analysis of site-specific N-glycan remodeling in the endoplasmic reticulum and the Golgi. Glycobiology. PMID 26240167 DOI: 10.1093/Glycob/Cwv058 |
0.306 |
|
| 2015 |
Zhao Y, Singh A, Li L, Linhardt RJ, Xu Y, Liu J, Woods RJ, Amster IJ. Investigating changes in the gas-phase conformation of Antithrombin III upon binding of Arixtra using traveling wave ion mobility spectrometry (TWIMS). The Analyst. 140: 6980-9. PMID 26115461 DOI: 10.1039/C5An00908A |
0.37 |
|
| 2015 |
Singh A, Kett WC, Severin IC, Agyekum I, Duan J, Amster IJ, Proudfoot AE, Coombe DR, Woods RJ. The Interaction of Heparin Tetrasaccharides with Chemokine CCL5 Is Modulated by Sulfation Pattern and pH. The Journal of Biological Chemistry. 290: 15421-36. PMID 25907556 DOI: 10.1074/Jbc.M115.655845 |
0.335 |
|
| 2015 |
Ng S, Lin E, Kitov PI, Tjhung KF, Gerlits OO, Deng L, Kasper B, Sood A, Paschal BM, Zhang P, Ling CC, Klassen JS, Noren CJ, Mahal LK, Woods RJ, et al. Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteins. Journal of the American Chemical Society. 137: 5248-51. PMID 25860443 DOI: 10.1021/Ja511237N |
0.348 |
|
| 2015 |
Krishnamurthy VR, Sardar MY, Ying Y, Song X, Haller C, Dai E, Wang X, Hanjaya-Putra D, Sun L, Morikis V, Simon SI, Woods RJ, Cummings RD, Chaikof EL. Glycopeptide analogues of PSGL-1 inhibit P-selectin in vitro and in vivo. Nature Communications. 6: 6387. PMID 25824568 DOI: 10.1038/Ncomms7387 |
0.325 |
|
| 2015 |
Hadden JA, Tessier MB, Fadda E, Woods RJ. Calculating binding free energies for protein-carbohydrate complexes. Methods in Molecular Biology (Clifton, N.J.). 1273: 431-65. PMID 25753724 DOI: 10.1007/978-1-4939-2343-4_26 |
0.751 |
|
| 2015 |
Queiroz IN, Wang X, Glushka JN, Santos GR, Valente AP, Prestegard JH, Woods RJ, Mourão PA, Pomin VH. Impact of sulfation pattern on the conformation and dynamics of sulfated fucan oligosaccharides as revealed by NMR and MD. Glycobiology. 25: 535-47. PMID 25527427 DOI: 10.1093/Glycob/Cwu184 |
0.339 |
|
| 2015 |
Lak P, Makeneni S, Woods RJ, Lowary TL. Specificity of furanoside-protein recognition through antibody engineering and molecular modeling. Chemistry (Weinheim An Der Bergstrasse, Germany). 21: 1138-48. PMID 25413161 DOI: 10.1002/Chem.201405259 |
0.349 |
|
| 2014 |
Makeneni S, Ji Y, Watson DC, Young NM, Woods RJ. Predicting the Origins of Anti-Blood Group Antibody Specificity: A Case Study of the ABO A- and B-Antigens. Frontiers in Immunology. 5: 397. PMID 25202309 DOI: 10.3389/Fimmu.2014.00397 |
0.316 |
|
| 2014 |
Panagos CG, Thomson DS, Moss C, Hughes AD, Kelly MS, Liu Y, Chai W, Venkatasamy R, Spina D, Page CP, Hogwood J, Woods RJ, Mulloy B, Bavington CD, UhrÃn D. Fucosylated chondroitin sulfates from the body wall of the sea cucumber Holothuria forskali: conformation, selectin binding, and biological activity. The Journal of Biological Chemistry. 289: 28284-98. PMID 25147180 DOI: 10.1074/Jbc.M114.572297 |
0.341 |
|
| 2014 |
Grant OC, Woods RJ. Recent advances in employing molecular modelling to determine the specificity of glycan-binding proteins. Current Opinion in Structural Biology. 28: 47-55. PMID 25108191 DOI: 10.1016/J.Sbi.2014.07.001 |
0.379 |
|
| 2014 |
Hadden JA, French AD, Woods RJ. Effect of microfibril twisting on theoretical powder diffraction patterns of cellulose Iβ Cellulose (London, England). 21: 879-884. PMID 24729665 DOI: 10.1007/S10570-013-0051-Z |
0.741 |
|
| 2014 |
Nivedha AK, Makeneni S, Foley BL, Tessier MB, Woods RJ. Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaff. Journal of Computational Chemistry. 35: 526-39. PMID 24375430 DOI: 10.1002/Jcc.23517 |
0.318 |
|
| 2014 |
Grant OC, Smith HM, Firsova D, Fadda E, Woods RJ. Presentation, presentation, presentation! Molecular-level insight into linker effects on glycan array screening data. Glycobiology. 24: 17-25. PMID 24056723 DOI: 10.1093/Glycob/Cwt083 |
0.322 |
|
| 2013 |
Wood NT, Fadda E, Davis R, Grant OC, Martin JC, Woods RJ, Travers SA. The influence of N-linked glycans on the molecular dynamics of the HIV-1 gp120 V3 loop. Plos One. 8: e80301. PMID 24303005 DOI: 10.1371/Journal.Pone.0080301 |
0.301 |
|
| 2013 |
Meng L, Forouhar F, Thieker D, Gao Z, Ramiah A, Moniz H, Xiang Y, Seetharaman J, Milaninia S, Su M, Bridger R, Veillon L, Azadi P, Kornhaber G, Wells L, ... ... Woods RJ, et al. Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation. The Journal of Biological Chemistry. 288: 34680-98. PMID 24155237 DOI: 10.1074/Jbc.M113.519041 |
0.354 |
|
| 2013 |
Siriwardena A, Pulukuri KK, Kandiyal PS, Roy S, Bande O, Ghosh S, Garcia Fernández JM, Martin FA, Ghigo JM, Beloin C, Ito K, Woods RJ, Ampapathi RS, Chakraborty TK. Sugar-modified foldamers as conformationally defined and biologically distinct glycopeptide mimics. Angewandte Chemie (International Ed. in English). 52: 10221-6. PMID 23943598 DOI: 10.1002/Anie.201304239 |
0.333 |
|
| 2013 |
Hadden JA, French AD, Woods RJ. Unraveling cellulose microfibrils: a twisted tale. Biopolymers. 99: 746-56. PMID 23681971 DOI: 10.1002/Bip.22279 |
0.747 |
|
| 2013 |
Tessier MB, Grant OC, Heimburg-Molinaro J, Smith D, Jadey S, Gulick AM, Glushka J, Deutscher SL, Rittenhouse-Olson K, Woods RJ. Computational screening of the human TF-glycome provides a structural definition for the specificity of anti-tumor antibody JAA-F11. Plos One. 8: e54874. PMID 23365681 DOI: 10.1371/Journal.Pone.0054874 |
0.347 |
|
| 2012 |
Johnson MA, Cartmell J, Weisser NE, Woods RJ, Bundle DR. Molecular recognition of Candida albicans (1->2)-β-mannan oligosaccharides by a protective monoclonal antibody reveals the immunodominance of internal saccharide residues. The Journal of Biological Chemistry. 287: 18078-90. PMID 22493450 DOI: 10.1074/Jbc.M112.355578 |
0.352 |
|
| 2012 |
Ficko-Blean E, Stuart CP, Suits MD, Cid M, Tessier M, Woods RJ, Boraston AB. Carbohydrate recognition by an architecturally complex α-N-acetylglucosaminidase from Clostridium perfringens. Plos One. 7: e33524. PMID 22479408 DOI: 10.1371/Journal.Pone.0033524 |
0.338 |
|
| 2012 |
Yang L, Duggan E, Tompkins SM, Woods RJ, Nolan JP. A Multiplex Suspension Array for Screening of Carbohydrate Binding Proteins and Influenza Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.017 |
0.355 |
|
| 2011 |
Fadda E, Woods RJ. On the Role of Water Models in Quantifying the Binding Free Energy of Highly Conserved Water Molecules in Proteins: The Case of Concanavalin A. Journal of Chemical Theory and Computation. 7: 3391-8. PMID 26598169 DOI: 10.1021/Ct200404Z |
0.324 |
|
| 2011 |
DeMarco ML, Woods RJ. From agonist to antagonist: structure and dynamics of innate immune glycoprotein MD-2 upon recognition of variably acylated bacterial endotoxins. Molecular Immunology. 49: 124-33. PMID 21924775 DOI: 10.1016/J.Molimm.2011.08.003 |
0.332 |
|
| 2011 |
Kadirvelraj R, Grant OC, Goldstein IJ, Winter HC, Tateno H, Fadda E, Woods RJ. Structure and binding analysis of Polyporus squamosus lectin in complex with the Neu5Ac{alpha}2-6Gal{beta}1-4GlcNAc human-type influenza receptor. Glycobiology. 21: 973-84. PMID 21436237 DOI: 10.1093/Glycob/Cwr030 |
0.408 |
|
| 2011 |
Ju R, Tessier M, Olliff L, Woods R, Summers A, Geng Y. Supramolecular dendrimer capsules by cooperative binding. Chemical Communications (Cambridge, England). 47: 268-70. PMID 20689873 DOI: 10.1039/C0Cc01983F |
0.301 |
|
| 2010 |
Woods RJ, Tessier MB. Computational glycoscience: characterizing the spatial and temporal properties of glycans and glycan-protein complexes. Current Opinion in Structural Biology. 20: 575-83. PMID 20708922 DOI: 10.1016/J.Sbi.2010.07.005 |
0.384 |
|
| 2010 |
Fadda E, Woods RJ. Molecular simulations of carbohydrates and protein-carbohydrate interactions: motivation, issues and prospects. Drug Discovery Today. 15: 596-609. PMID 20594934 DOI: 10.1016/J.Drudis.2010.06.001 |
0.348 |
|
| 2009 |
DeMarco ML, Woods RJ. Atomic-resolution conformational analysis of the GM3 ganglioside in a lipid bilayer and its implications for ganglioside-protein recognition at membrane surfaces. Glycobiology. 19: 344-55. PMID 19056784 DOI: 10.1093/Glycob/Cwn137 |
0.314 |
|
| 2008 |
Kadirvelraj R, Foley BL, Dyekjaer JD, Woods RJ. Involvement of water in carbohydrate-protein binding: concanavalin A revisited. Journal of the American Chemical Society. 130: 16933-42. PMID 19053475 DOI: 10.1021/Ja8039663 |
0.358 |
|
| 2008 |
Yongye AB, Gonzalez-Outeiriño J, Glushka J, Schultheis V, Woods RJ. The conformational properties of methyl alpha-(2,8)-di/trisialosides and their N-acyl analogues: implications for anti-Neisseria meningitidis B vaccine design. Biochemistry. 47: 12493-514. PMID 18954144 DOI: 10.1021/Bi800431C |
0.335 |
|
| 2008 |
Charvátová O, Foley BL, Bern MW, Sharp JS, Orlando R, Woods RJ. Quantifying protein interface footprinting by hydroxyl radical oxidation and molecular dynamics simulation: application to galectin-1. Journal of the American Society For Mass Spectrometry. 19: 1692-705. PMID 18707901 DOI: 10.1016/J.Jasms.2008.07.013 |
0.321 |
|
| 2008 |
DeMarco ML, Woods RJ. Structural glycobiology: a game of snakes and ladders. Glycobiology. 18: 426-40. PMID 18390826 DOI: 10.1093/Glycob/Cwn026 |
0.352 |
|
| 2008 |
Yongye AB, Foley BL, Woods RJ. On achieving experimental accuracy from molecular dynamics simulations of flexible molecules: aqueous glycerol. The Journal of Physical Chemistry. A. 112: 2634-9. PMID 18311953 DOI: 10.1021/Jp710544S |
0.311 |
|
| 2007 |
Seyfried NT, Atwood JA, Yongye A, Almond A, Day AJ, Orlando R, Woods RJ. Fourier transform mass spectrometry to monitor hyaluronan-protein interactions: use of hydrogen/deuterium amide exchange. Rapid Communications in Mass Spectrometry : Rcm. 21: 121-31. PMID 17154353 DOI: 10.1002/Rcm.2817 |
0.363 |
|
| 2006 |
Kawatkar SP, Kuntz DA, Woods RJ, Rose DR, Boons GJ. Structural basis of the inhibition of Golgi alpha-mannosidase II by mannostatin A and the role of the thiomethyl moiety in ligand-protein interactions. Journal of the American Chemical Society. 128: 8310-9. PMID 16787095 DOI: 10.1021/Ja061216P |
0.342 |
|
| 2006 |
Kadirvelraj R, Gonzalez-Outeiriño J, Foley BL, Beckham ML, Jennings HJ, Foote S, Ford MG, Woods RJ. Understanding the bacterial polysaccharide antigenicity of Streptococcus agalactiae versus Streptococcus pneumoniae. Proceedings of the National Academy of Sciences of the United States of America. 103: 8149-54. PMID 16705032 DOI: 10.1073/Pnas.0602815103 |
0.353 |
|
| 2005 |
González-Outeiriño J, Kadirvelraj R, Woods RJ. Structural elucidation of type III group B Streptococcus capsular polysaccharide using molecular dynamics simulations: the role of sialic acid. Carbohydrate Research. 340: 1007-18. PMID 15780265 DOI: 10.1016/J.Carres.2004.12.034 |
0.335 |
|
| 2004 |
Bosques CJ, Tschampel SM, Woods RJ, Imperiali B. Effects of glycosylation on peptide conformation: a synergistic experimental and computational study. Journal of the American Chemical Society. 126: 8421-5. PMID 15237998 DOI: 10.1021/Ja0496266 |
0.302 |
|
| 2004 |
Gonzalez-Outeiriño J, Glushka J, Siriwardena A, Woods RJ. The structure and conformational behavior of sulfonium salt glycosidase inhibitors in solution: a combined quantum mechanical NMR approach. Journal of the American Chemical Society. 126: 6866-7. PMID 15174846 DOI: 10.1021/Ja049700K |
0.314 |
|
| 2004 |
Corzana F, Motawia MS, Hervé du Penhoat C, Perez S, Tschampel SM, Woods RJ, Engelsen SB. A Hydration Study of (1→4) and (1→6) Linked α-Glucans by Comparative 10 ns Molecular Dynamics Simulations and 500-MHz NMR Journal of Computational Chemistry. 25: 573-586. PMID 14735575 DOI: 10.1002/Jcc.10405 |
0.314 |
|
| 2003 |
Tschampel SM, Woods RJ. Quantifying the role of water in protein-carbohydrate interactions. The Journal of Physical Chemistry. A. 107: 9175-81. PMID 16906231 DOI: 10.1021/Jp035027U |
0.303 |
|
| 2003 |
Ford MG, Weimar T, Köhli T, Woods RJ. Molecular dynamics simulations of galectin-1-oligosaccharide complexes reveal the molecular basis for ligand diversity. Proteins. 53: 229-40. PMID 14517974 DOI: 10.1002/Prot.10428 |
0.373 |
|
| 2002 |
Tempel W, Tschampel S, Woods RJ. The xenograft antigen bound to Griffonia simplicifolia lectin 1-B(4). X-ray crystal structure of the complex and molecular dynamics characterization of the binding site. The Journal of Biological Chemistry. 277: 6615-21. PMID 11714721 DOI: 10.1074/Jbc.M109919200 |
0.349 |
|
| 2001 |
Clarke C, Woods RJ, Gluska J, Cooper A, Nutley MA, Boons GJ. Involvement of water in carbohydrate-protein binding Journal of the American Chemical Society. 123: 12238-12247. PMID 11734024 DOI: 10.1021/Ja004315Q |
0.357 |
|
| 2001 |
Kirschner KN, Woods RJ. Solvent interactions determine carbohydrate conformation Proceedings of the National Academy of Sciences of the United States of America. 98: 10541-10545. PMID 11526221 DOI: 10.1073/Pnas.191362798 |
0.358 |
|
| 2000 |
Pathiaseril A, Woods RJ. Relative energies of binding for antibody-carbohydrate-antigen complexes computed from free-energy simulations. Journal of the American Chemical Society. 122: 331-338. PMID 17211491 DOI: 10.1021/Ja9914994 |
0.351 |
|
| 1998 |
Woods RJ, Pathiaseril A, Wormald MR, Edge CJ, Dwek RA. The high degree of internal flexibility observed for an oligomannose oligosaccharide does not alter the overall topology of the molecule European Journal of Biochemistry. 258: 372-386. PMID 9874202 DOI: 10.1046/J.1432-1327.1998.2580372.X |
0.377 |
|
| 1998 |
Woods RJ. Computational carbohydrate chemistry: what theoretical methods can tell us Glycoconjugate Journal. 15: 209-216. PMID 9579797 DOI: 10.1023/A:1006984709892 |
0.375 |
|
| 1995 |
Woods RJ. Three-dimensional structures of oligosaccharides Current Opinion in Structural Biology. 5: 591-598. PMID 8574693 DOI: 10.1016/0959-440X(95)80049-2 |
0.343 |
|
| 1991 |
Woods RJ, Szarek WA, Smith Jr. VH. The proton affinities and deprotonation enthalpies of β-D-fructopyranose and α-L-sorbopyranose Canadian Journal of Chemistry. 69: 1917-1928. DOI: 10.1139/V91-277 |
0.301 |
|
| 1991 |
Woods RJ, Szarek WA, Smith VH. A comparison of semiempirical and ab initio methods for the study of structural features of relevance in carbohydrate chemistry Journal of the Chemical Society, Chemical Communications. 334-337. DOI: 10.1039/C39910000334 |
0.318 |
|
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