| Year |
Citation |
Score |
| 2024 |
Alfadhli A, Romanaggi C, Barklis RL, Barklis E. Second site reversion of HIV-1 envelope protein baseplate mutations maps to the matrix protein. Journal of Virology. e0174223. PMID 38193694 DOI: 10.1128/jvi.01742-23 |
0.388 |
|
| 2023 |
Alfadhli A, Romanaggi C, Barklis RL, Barklis E. Analysis of HIV-1 envelope cytoplasmic tail effects on viral replication. Virology. 579: 54-66. PMID 36603533 DOI: 10.1016/j.virol.2022.12.017 |
0.374 |
|
| 2021 |
Alfadhli A, Romanaggi C, Barklis RL, Merutka I, Bates TA, Tafesse FG, Barklis E. Capsid-specific nanobody effects on HIV-1 assembly and infectivity. Virology. 562: 19-28. PMID 34246112 DOI: 10.1016/j.virol.2021.07.001 |
0.397 |
|
| 2021 |
Barklis E, Alfadhli A, Kyle JE, Bramer LM, Bloodsworth KJ, Barklis RL, Leier HC, Petty RM, Zelnik ID, Metz TO, Futerman AH, Tafesse FG. Ceramide synthase 2 deletion decreases the infectivity of HIV-1. The Journal of Biological Chemistry. 100340. PMID 33515546 DOI: 10.1016/j.jbc.2021.100340 |
0.367 |
|
| 2020 |
Leier HC, Weinstein JB, Kyle JE, Lee JY, Bramer LM, Stratton KG, Kempthorne D, Navratil AR, Tafesse EG, Hornemann T, Messer WB, Dennis EA, Metz TO, Barklis E, Tafesse FG. A global lipid map defines a network essential for Zika virus replication. Nature Communications. 11: 3652. PMID 32694525 DOI: 10.1038/S41467-020-17433-9 |
0.347 |
|
| 2019 |
Tedbury PR, Novikova M, Alfadhli A, Hikichi Y, Kagiampakis I, KewalRamani VN, Barklis E, Freed EO. HIV-1 matrix trimerization-impaired mutants are rescued by matrix substitutions that enhance envelope glycoprotein incorporation. Journal of Virology. PMID 31619553 DOI: 10.1128/Jvi.01526-19 |
0.514 |
|
| 2019 |
Staubus AO, Alfadhli A, Barklis RL, Barklis E. Replication of HIV-1 envelope protein cytoplasmic domain variants in permissive and restrictive cells. Virology. 538: 1-10. PMID 31550607 DOI: 10.1016/J.Virol.2019.09.008 |
0.507 |
|
| 2019 |
Alfadhli A, Staubus AO, Tedbury PR, Novikova M, Freed EO, Barklis E. Analysis of HIV-1 matrix-envelope cytoplasmic tail interactions. Journal of Virology. PMID 31375589 DOI: 10.1128/Jvi.01079-19 |
0.433 |
|
| 2019 |
Barklis E, Stephen AG, Staubus AO, Barklis RL, Alfadhli A. Organization of Farnesylated, Carboxymethylated KRAS4B on Membranes. Journal of Molecular Biology. PMID 31330153 DOI: 10.1016/J.Jmb.2019.07.025 |
0.361 |
|
| 2018 |
Barklis E, Staubus AO, Mack A, Harper L, Barklis RL, Alfadhli A. Lipid biosensor interactions with wild type and matrix deletion HIV-1 Gag proteins. Virology. 518: 264-271. PMID 29549788 DOI: 10.1016/J.Virol.2018.03.004 |
0.516 |
|
| 2016 |
Alfadhli A, Mack A, Harper L, Berk S, Ritchie C, Barklis E. Analysis of quinolinequinone reactivity, cytotoxicity, and anti-HIV-1 properties. Bioorganic & Medicinal Chemistry. 24: 5618-5625. PMID 27663546 DOI: 10.1016/J.Bmc.2016.09.028 |
0.444 |
|
| 2016 |
Alfadhli A, Mack A, Ritchie C, Cylinder I, Harper L, Tedbury PR, Freed EO, Barklis E. TRIMER ENHANCEMENT MUTATION EFFECTS ON HIV-1 MATRIX PROTEIN BINDING ACTIVITIES. Journal of Virology. PMID 27030269 DOI: 10.1128/Jvi.00509-16 |
0.548 |
|
| 2015 |
Ritchie C, Cylinder I, Platt EJ, Barklis E. Analysis of HIV-1 Gag protein interactions via biotin ligase tagging. Journal of Virology. 89: 3988-4001. PMID 25631074 DOI: 10.1128/Jvi.03584-14 |
0.474 |
|
| 2014 |
López CS, Sloan R, Cylinder I, Kozak SL, Kabat D, Barklis E. RRE-dependent HIV-1 Env RNA effects on Gag protein expression, assembly and release. Virology. 462: 126-34. PMID 24971705 DOI: 10.1016/J.Virol.2014.05.019 |
0.485 |
|
| 2014 |
Alfadhli A, Barklis E. The roles of lipids and nucleic acids in HIV-1 assembly. Frontiers in Microbiology. 5: 253. PMID 24917853 DOI: 10.3389/Fmicb.2014.00253 |
0.529 |
|
| 2013 |
López CS, Tsagli SM, Sloan R, Eccles J, Barklis E. Second site reversion of a mutation near the amino terminus of the HIV-1 capsid protein. Virology. 447: 95-103. PMID 24210103 DOI: 10.1016/J.Virol.2013.08.023 |
0.489 |
|
| 2013 |
Alfadhli A, McNett H, Eccles J, Tsagli S, Noviello C, Sloan R, López CS, Peyton DH, Barklis E. Analysis of small molecule ligands targeting the HIV-1 matrix protein-RNA binding site. The Journal of Biological Chemistry. 288: 666-76. PMID 23135280 DOI: 10.1074/Jbc.M112.399865 |
0.695 |
|
| 2011 |
Alfadhli A, McNett H, Tsagli S, Bächinger HP, Peyton DH, Barklis E. HIV-1 matrix protein binding to RNA. Journal of Molecular Biology. 410: 653-66. PMID 21762806 DOI: 10.1016/J.Jmb.2011.04.063 |
0.492 |
|
| 2011 |
López CS, Eccles JD, Still A, Sloan RE, Barklis RL, Tsagli SM, Barklis E. Determinants of the HIV-1 core assembly pathway. Virology. 417: 137-46. PMID 21676426 DOI: 10.1016/J.Virol.2011.05.011 |
0.432 |
|
| 2011 |
Noviello CM, López CS, Kukull B, McNett H, Still A, Eccles J, Sloan R, Barklis E. Second-site compensatory mutations of HIV-1 capsid mutations. Journal of Virology. 85: 4730-8. PMID 21367891 DOI: 10.1128/Jvi.00099-11 |
0.703 |
|
| 2011 |
Still A, Huseby D, Barklis E. Analysis of the N-terminal region of the murine leukemia virus nucleocapsid protein. Virus Research. 155: 181-8. PMID 20934471 DOI: 10.1016/J.Virusres.2010.10.001 |
0.483 |
|
| 2010 |
Dikeakos JD, Atkins KM, Thomas L, Emert-Sedlak L, Byeon IJ, Jung J, Ahn J, Wortman MD, Kukull B, Saito M, Koizumi H, Williamson DM, Hiyoshi M, Barklis E, Takiguchi M, et al. Small molecule inhibition of HIV-1-induced MHC-I down-regulation identifies a temporally regulated switch in Nef action. Molecular Biology of the Cell. 21: 3279-92. PMID 20702582 DOI: 10.1091/Mbc.E10-05-0470 |
0.339 |
|
| 2009 |
Alfadhli A, Still A, Barklis E. Analysis of human immunodeficiency virus type 1 matrix binding to membranes and nucleic acids. Journal of Virology. 83: 12196-203. PMID 19776118 DOI: 10.1128/Jvi.01197-09 |
0.428 |
|
| 2009 |
Barklis E, Alfadhli A, McQuaw C, Yalamuri S, Still A, Barklis RL, Kukull B, López CS. Characterization of the in vitro HIV-1 capsid assembly pathway. Journal of Molecular Biology. 387: 376-89. PMID 19356593 DOI: 10.1016/J.Jmb.2009.01.058 |
0.423 |
|
| 2009 |
Alfadhli A, Barklis RL, Barklis E. HIV-1 matrix organizes as a hexamer of trimers on membranes containing phosphatidylinositol-(4,5)-bisphosphate. Virology. 387: 466-72. PMID 19327811 DOI: 10.1016/J.Virol.2009.02.048 |
0.541 |
|
| 2008 |
Scholz I, Still A, Dhenub TC, Coday K, Webb M, Barklis E. Analysis of human immunodeficiency virus matrix domain replacements. Virology. 371: 322-35. PMID 17996264 DOI: 10.1016/J.Virol.2007.10.010 |
0.549 |
|
| 2007 |
Hung CH, Thomas L, Ruby CE, Atkins KM, Morris NP, Knight ZA, Scholz I, Barklis E, Weinberg AD, Shokat KM, Thomas G. HIV-1 Nef assembles a Src family kinase-ZAP-70/Syk-PI3K cascade to downregulate cell-surface MHC-I. Cell Host & Microbe. 1: 121-33. PMID 18005690 DOI: 10.1016/J.Chom.2007.03.004 |
0.381 |
|
| 2007 |
Barklis E, Still A, Sabri MI, Hirsch AJ, Nikolich-Zugich J, Brien J, Dhenub TC, Scholz I, Alfadhli A. Sultam thiourea inhibition of West Nile virus. Antimicrobial Agents and Chemotherapy. 51: 2642-5. PMID 17452483 DOI: 10.1128/Aac.00007-07 |
0.347 |
|
| 2007 |
Alfadhli A, Huseby D, Kapit E, Colman D, Barklis E. Human immunodeficiency virus type 1 matrix protein assembles on membranes as a hexamer. Journal of Virology. 81: 1472-8. PMID 17108052 DOI: 10.1128/Jvi.02122-06 |
0.513 |
|
| 2005 |
Alfadhli A, Dhenub TC, Still A, Barklis E. Analysis of human immunodeficiency virus type 1 Gag dimerization-induced assembly. Journal of Virology. 79: 14498-506. PMID 16282449 DOI: 10.1128/Jvi.79.23.14498-14506.2005 |
0.535 |
|
| 2005 |
Vana ML, Chen A, Boross P, Weber I, Colman D, Barklis E, Leis J. Mutations affecting cleavage at the p10-capsid protease cleavage site block Rous sarcoma virus replication. Retrovirology. 2: 58. PMID 16188035 DOI: 10.1186/1742-4690-2-58 |
0.418 |
|
| 2005 |
Huseby D, Barklis RL, Alfadhli A, Barklis E. Assembly of human immunodeficiency virus precursor gag proteins. The Journal of Biological Chemistry. 280: 17664-70. PMID 15734744 DOI: 10.1074/Jbc.M412325200 |
0.497 |
|
| 2005 |
Scholz I, Arvidson B, Huseby D, Barklis E. Virus particle core defects caused by mutations in the human immunodeficiency virus capsid N-terminal domain. Journal of Virology. 79: 1470-9. PMID 15650173 DOI: 10.1128/Jvi.79.3.1470-1479.2005 |
0.5 |
|
| 2003 |
Arvidson B, Seeds J, Webb M, Finlay L, Barklis E. Analysis of the retrovirus capsid interdomain linker region. Virology. 308: 166-77. PMID 12706100 DOI: 10.1016/S0042-6822(02)00142-3 |
0.535 |
|
| 2003 |
Tang C, Loeliger E, Kinde I, Kyere S, Mayo K, Barklis E, Sun Y, Huang M, Summers MF. Antiviral inhibition of the HIV-1 capsid protein. Journal of Molecular Biology. 327: 1013-20. PMID 12662926 DOI: 10.1016/S0022-2836(03)00289-4 |
0.541 |
|
| 2003 |
Mayo K, Huseby D, McDermott J, Arvidson B, Finlay L, Barklis E. Retrovirus capsid protein assembly arrangements. Journal of Molecular Biology. 325: 225-37. PMID 12473464 DOI: 10.1016/S0022-2836(02)01176-2 |
0.518 |
|
| 2002 |
Mayo K, McDermott J, Barklis E. Hexagonal organization of Moloney murine leukemia virus capsid proteins. Virology. 298: 30-8. PMID 12093170 DOI: 10.1006/Viro.2002.1452 |
0.458 |
|
| 2002 |
Alfadhli A, Steel E, Finlay L, Bächinger HP, Barklis E. Hantavirus nucleocapsid protein coiled-coil domains. The Journal of Biological Chemistry. 277: 27103-8. PMID 12019266 DOI: 10.1074/Jbc.M203395200 |
0.416 |
|
| 2002 |
Mayo K, Vana ML, McDermott J, Huseby D, Leis J, Barklis E. Analysis of Rous sarcoma virus capsid protein variants assembled on lipid monolayers. Journal of Molecular Biology. 316: 667-78. PMID 11866525 DOI: 10.1006/Jmbi.2001.5354 |
0.387 |
|
| 2001 |
Alfadhli A, Love Z, Arvidson B, Seeds J, Willey J, Barklis E. Hantavirus nucleocapsid protein oligomerization Journal of Virology. 75: 2019-2023. PMID 11160704 DOI: 10.1128/Jvi.75.4.2019-2023.2001 |
0.41 |
|
| 2000 |
McDermott J, Mayo K, Barklis E. Three-dimensional organization of retroviral capsid proteins on a lipid monolayer Journal of Molecular Biology. 302: 121-133. PMID 10964565 DOI: 10.1006/Jmbi.2000.4030 |
0.419 |
|
| 2000 |
Zuber G, McDermott J, Karanjia S, Zhao W, Schmid MF, Barklis E. Assembly of Retrovirus Capsid-Nucleocapsid Proteins in the Presence of Membranes or RNA Journal of Virology. 74: 7431-7441. PMID 10906196 DOI: 10.1128/Jvi.74.16.7431-7441.2000 |
0.484 |
|
| 2000 |
McDermott J, Karanjia S, Love Z, Barklis E. Crosslink analysis of N-terminal, C-terminal, and N/B determining regions of the Moloney murine leukemia virus capsid protein. Virology. 269: 190-200. PMID 10725211 DOI: 10.1006/Viro.2000.0212 |
0.44 |
|
| 2000 |
Zuber G, Barklis E. Atomic Force Microscopy and Electron Microscopy Analysis of Retrovirus Gag Proteins Assembled in Vitro on Lipid Bilayers Biophysical Journal. 78: 373-384. PMID 10620301 DOI: 10.1016/S0006-3495(00)76600-8 |
0.392 |
|
| 1998 |
Clish CB, Peyton DH, Barklis E. Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy European Journal of Biochemistry. 257: 69-77. PMID 9799104 DOI: 10.1046/J.1432-1327.1998.2570069.X |
0.434 |
|
| 1998 |
Barklis E, McDermott J, Wilkens S, Fuller S, Thompson D. Organization of HIV-1 capsid proteins on a lipid monolayer Journal of Biological Chemistry. 273: 7177-7180. PMID 9516405 DOI: 10.1074/Jbc.273.13.7177 |
0.496 |
|
| 1998 |
Zhang Y, Qian H, Love Z, Barklis E. Analysis of the assembly function of the human immunodeficiency virus type 1 gag protein nucleocapsid domain. Journal of Virology. 72: 1782-9. PMID 9499028 DOI: 10.1128/Jvi.72.3.1782-1789.1998 |
0.493 |
|
| 1997 |
Mougel M, Barklis E. A role for two hairpin structures as a core RNA encapsidation signal in murine leukemia virus virions. Journal of Virology. 71: 8061-8065. PMID 9311905 DOI: 10.1128/Jvi.71.10.8061-8065.1997 |
0.376 |
|
| 1997 |
Zhang Y, Barklis E. Effects of nucleocapsid mutations on human immunodeficiency virus assembly and RNA encapsidation. Journal of Virology. 71: 6765-76. PMID 9261401 DOI: 10.1128/Jvi.71.9.6765-6776.1997 |
0.526 |
|
| 1997 |
Birrell GB, Hedberg KK, Barklis E, Griffith OH. Partial isolation from intact cells of a cell surface-exposed lysophosphatidylinositol-phospholipase C. Journal of Cellular Biochemistry. 65: 550-64. PMID 9178104 DOI: 10.1002/(Sici)1097-4644(19970615)65:4<550::Aid-Jcb10>3.0.Co;2-G |
0.338 |
|
| 1997 |
Barklis E, McDermott J, Wilkens S, Schabtach E, Schmid MF, Fuller S, Karanjia S, Love Z, Jones R, Rui Y, Zhao X, Thompson D. Structural analysis of membrane-bound retrovirus capsid proteins Embo Journal. 16: 1199-1213. PMID 9135137 DOI: 10.1093/Emboj/16.6.1199 |
0.465 |
|
| 1996 |
Mcdermott J, Farrell L, Ross R, Barklis E. Structural analysis of human immunodeficiency virus type 1 Gag protein interactions, using cysteine-specific reagents. Journal of Virology. 70: 5106-5114. PMID 8764018 DOI: 10.1128/Jvi.70.8.5106-5114.1996 |
0.486 |
|
| 1996 |
Mougel M, Zhang Y, Barklis E. cis-active structural motifs involved in specific encapsidation of Moloney murine leukemia virus RNA. Journal of Virology. 70: 5043-50. PMID 8764011 DOI: 10.1128/Jvi.70.8.5043-5050.1996 |
0.412 |
|
| 1996 |
Clish CB, Peyton DH, Barklis E. Spectroscopic study of an HIV-1 capsid protein major homology region peptide analog Febs Letters. 378: 43-47. PMID 8549799 DOI: 10.1016/0014-5793(95)01419-5 |
0.432 |
|
| 1995 |
Hansen MST, Barklis E. Structural interactions between retroviral Gag proteins examined by cysteine cross-linking. Journal of Virology. 69: 1150-1159. PMID 7815493 DOI: 10.1128/Jvi.69.2.1150-1159.1995 |
0.452 |
|
| 1995 |
Zhang Y, Barklis E. Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation. Journal of Virology. 69: 5716-22. PMID 7637017 DOI: 10.1128/Jvi.69.9.5716-5722.1995 |
0.517 |
|
| 1995 |
Yamauchi M, Freitag B, Khan C, Berwin B, Barklis E. Stem cell factor binding to retrovirus primer binding site silencers. Journal of Virology. 69: 1142-9. PMID 7529329 DOI: 10.1128/Jvi.69.2.1142-1149.1995 |
0.35 |
|
| 1994 |
Wang CT, Stegeman-Olsen J, Zhang Y, Barklis E. Assembly of HIV GAG-B-Galactosidase Fusion Proteins into Virus Particles Virology. 200: 524-534. PMID 8178440 DOI: 10.1006/Viro.1994.1215 |
0.521 |
|
| 1993 |
Berwin B, Barklis E. Retrovirus-mediated insertion of expressed and non-expressed genes at identical chromosomal locations. Nucleic Acids Research. 21: 2399-407. PMID 8506135 DOI: 10.1093/Nar/21.10.2399 |
0.395 |
|
| 1993 |
Kempler G, Freitag B, Berwin B, Nanassy O, Barklis E. Characterization of the Moloney murine leukemia virus stem cell-specific repressor binding site. Virology. 193: 690-9. PMID 8460481 DOI: 10.1006/Viro.1993.1177 |
0.402 |
|
| 1993 |
Hansen M, Jelinek L, Jones RS, Stegeman-Olsen J, Barklis E. Assembly and composition of intracellular particles formed by Moloney murine leukemia virus. Journal of Virology. 67: 5163-5174. PMID 8350394 DOI: 10.1128/Jvi.67.9.5163-5174.1993 |
0.403 |
|
| 1993 |
Wang C, Zhang Y, Mcdermott J, Barklis E. Conditional infectivity of a human immunodeficiency virus matrix domain deletion mutant. Journal of Virology. 67: 7067-7076. PMID 7693966 DOI: 10.1128/Jvi.67.12.7067-7076.1993 |
0.507 |
|
| 1992 |
Mace MC, Hansen M, Whiting S, Wang CT, Barklis E. Retroviral envelope protein fusions to secreted and membrane markers. Virology. 188: 869-874. PMID 1585654 DOI: 10.1016/0042-6822(92)90544-Y |
0.447 |
|
| 1991 |
Petersen R, Kempler G, Barklis E. A stem cell-specific silencer in the primer-binding site of a retrovirus. Molecular and Cellular Biology. 11: 1214-1221. PMID 1996087 DOI: 10.1128/mcb.11.3.1214-1221.1991 |
0.399 |
|
| 1990 |
Peckham I, Sobel S, Comer J, Jaenisch R, Barklis E. Retrovirus activation in embryonal carcinoma cells by cellular promoters. Genes & Development. 3: 2062-71. PMID 2628163 DOI: 10.1101/Gad.3.12B.2062 |
0.382 |
|
| 1990 |
Hansen M, Jelinek L, Whiting S, Barklis E. Transport and assembly of gag proteins into Moloney murine leukemia virus. Journal of Virology. 64: 5306-5316. PMID 1698996 DOI: 10.1128/Jvi.64.11.5306-5316.1990 |
0.491 |
|
| 1987 |
Weiher H, Barklis E, Ostertag W, Jaenisch R. Two distinct sequence elements mediate retroviral gene expression in embryonal carcinoma cells. Journal of Virology. 61: 2742-6. PMID 3612950 DOI: 10.1128/Jvi.61.9.2742-2746.1987 |
0.358 |
|
| 1986 |
Barklis E, Mulligan RC, Jaenisch R. Chromosomal position or virus mutation permits retrovirus expression in embryonal carcinoma cells. Cell. 47: 391-9. PMID 3768959 DOI: 10.1016/0092-8674(86)90596-9 |
0.352 |
|
| 1985 |
Barklis E, Pontius B, Lodish HF. Structure of the Dictyostelium discoideum prestalk D11 gene and protein. Molecular and Cellular Biology. 5: 1473-9. PMID 4033661 DOI: 10.1128/Mcb.5.6.1473 |
0.32 |
|
| 1985 |
Barklis E, Pontius B, Barfield K, Lodish HF. Structure of the promoter of the Dictyostelium discoideum prespore EB4 gene. Molecular and Cellular Biology. 5: 1465-72. PMID 3897836 DOI: 10.1128/Mcb.5.6.1465 |
0.313 |
|
| 1985 |
King ML, Barklis E. Regional distribution of maternal messenger RNA in the amphibian oocyte Developmental Biology. 112: 203-212. DOI: 10.1016/0012-1606(85)90134-4 |
0.318 |
|
| 1983 |
Barklis E, Lodish HF. Regulation of dictyostelium discoideum mRNAs specific for prespore or prestalk cells. Cell. 32: 1139-48. PMID 6301681 DOI: 10.1016/0092-8674(83)90297-0 |
0.313 |
|
| 1982 |
Blumberg DD, Margolskee JP, Barklis E, Chung SN, Cohen NS, Lodish HF. Specific cell-cell contacts are essential for induction of gene expression during differentiation of Dictyostelium discoideum. Proceedings of the National Academy of Sciences of the United States of America. 79: 127-31. PMID 16593139 DOI: 10.1073/Pnas.79.1.127 |
0.329 |
|
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