| Year |
Citation |
Score |
| 2022 |
Välikangas T, Suomi T, Chandler CE, Scott AJ, Tran BQ, Ernst RK, Goodlett DR, Elo LL. Benchmarking tools for detecting longitudinal differential expression in proteomics data allows establishing a robust reproducibility optimization regression approach. Nature Communications. 13: 7877. PMID 36550114 DOI: 10.1038/s41467-022-35564-z |
0.655 |
|
| 2019 |
Ribeiro LFC, Chelius C, Boppidi KR, Naik NS, Hossain S, Ramsey JJJ, Kumar J, Ribeiro LF, Ostermeier M, Tran B, Ah Goo Y, de Assis LJ, Ulas M, Bayram O, Goldman GH, et al. Comprehensive Analysis of Aspergillus nidulans PKA Phosphorylome Identifies a Novel Mode of CreA Regulation. Mbio. 10. PMID 31040248 DOI: 10.1128/Mbio.02825-18 |
0.333 |
|
| 2019 |
Khan MM, Chattagul S, Tran BQ, Freiberg JA, Nita-Lazar A, Shirtliff ME, Sermswan RW, Ernst RK, Goodlett DR. Temporal proteomic profiling reveals changes that support Burkholderia biofilms. Pathogens and Disease. PMID 30759239 DOI: 10.1093/Femspd/Ftz005 |
0.724 |
|
| 2019 |
Chelius CL, Ribeiro LFC, Huso W, Kumar J, Lincoln S, Tran B, Ah Goo Y, Srivastava R, Harris SD, Marten MR. Phosphoproteomic and transcriptomic analyses reveal multiple functions for Aspergillus nidulans MpkA independent of cell wall stress. Fungal Genetics and Biology : Fg & B. PMID 30639305 DOI: 10.1016/J.Fgb.2019.01.003 |
0.302 |
|
| 2017 |
Khan MM, Tran BQ, Jang YJ, Park SH, Fondrie WE, Chowdhury K, Yoon SH, Goodlett DR, Chae SW, Chae HJ, Seo SY, Goo YA. Assessment of the Therapeutic Potential of Persimmon Leaf Extract on Prediabetic Subjects. Molecules and Cells. PMID 28681595 DOI: 10.14348/Molcells.2017.2298 |
0.731 |
|
| 2016 |
Freiberg JA, Le Breton Y, Tran BQ, Scott AJ, Harro JM, Ernst RK, Goo YA, Mongodin EF, Goodlett DR, McIver KS, Shirtliff ME. Global Analysis and Comparison of the Transcriptomes and Proteomes of Group A Streptococcus Biofilms. Msystems. 1. PMID 27933318 DOI: 10.1128/mSystems.00149-16 |
0.767 |
|
| 2016 |
Kilgour DP, Hughes S, Kilgour SL, Mackay CL, Palmblad M, Tran BQ, Goo YA, Ernst RK, Clarke DJ, Goodlett DR. Autopiquer - a Robust and Reliable Peak Detection Algorithm for Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 27924495 DOI: 10.1007/S13361-016-1549-Z |
0.695 |
|
| 2016 |
Eshraghi A, Kim J, Walls AC, Ledvina HE, Miller CN, Ramsey KM, Whitney JC, Radey MC, Peterson SB, Ruhland BR, Tran BQ, Goo YA, Goodlett DR, Dove SL, Celli J, et al. Secreted Effectors Encoded within and outside of the Francisella Pathogenicity Island Promote Intramacrophage Growth. Cell Host & Microbe. 20: 573-583. PMID 27832588 DOI: 10.1016/J.Chom.2016.10.008 |
0.707 |
|
| 2016 |
Scott AJ, Flinders B, Cappell J, Liang T, Pelc RS, Tran B, Kilgour DP, Heeren RM, Goodlett DR, Ernst RK. Norharmane Matrix Enhances Detection of Endotoxin by MALDI-MS for Simultaneous Profiling of Pathogen, Host, and Vector Systems. Pathogens and Disease. PMID 27650574 DOI: 10.1093/Femspd/Ftw097 |
0.709 |
|
| 2016 |
Wexler AG, Bao Y, Whitney JC, Bobay LM, Xavier JB, Schofield WB, Barry NA, Russell AB, Tran BQ, Goo YA, Goodlett DR, Ochman H, Mougous JD, Goodman AL. Human symbionts inject and neutralize antibacterial toxins to persist in the gut. Proceedings of the National Academy of Sciences of the United States of America. PMID 26957597 DOI: 10.1073/Pnas.1525637113 |
0.674 |
|
| 2016 |
Tran BQ, Barton C, Feng J, Sandjong A, Yoon SH, Awasthi S, Liang T, Khan MM, Kilgour DP, Goodlett DR, Goo YA. Glycosylation characterization of therapeutic mAbs by top- and middle-down mass spectrometry. Data in Brief. 6: 68-76. PMID 26793758 DOI: 10.1016/J.Dib.2015.11.031 |
0.735 |
|
| 2016 |
Tran BQ, Goodlett DR, Goo YA. Advances in protein complex analysis by chemical cross-linking coupled with mass spectrometry (CXMS) and bioinformatics. Biochimica Et Biophysica Acta. 1864: 123-9. PMID 26025770 DOI: 10.1016/J.Bbapap.2015.05.015 |
0.729 |
|
| 2016 |
Tran BQ, Barton C, Feng J, Sandjong A, Yoon SH, Awasthi S, Liang T, Khan MM, Kilgour DPA, Goodlett DR, Goo YA. Glycosylation characterization of therapeutic mAbs by top- and middle-down mass spectrometry Data in Brief. 6: 68-76. DOI: 10.1016/j.dib.2015.11.031 |
0.729 |
|
| 2015 |
Tran BQ, Barton C, Feng J, Sandjong A, Yoon SH, Awasthi S, Liang T, Khan MM, Kilgour DP, Goodlett DR, Goo YA. Comprehensive glycosylation profiling of IgG and IgG-fusion proteins by top-down MS with multiple fragmentation techniques. Journal of Proteomics. PMID 26485299 DOI: 10.1016/J.Jprot.2015.10.021 |
0.735 |
|
| 2015 |
Whitney JC, Quentin D, Sawai S, LeRoux M, Harding BN, Ledvina HE, Tran BQ, Robinson H, Goo YA, Goodlett DR, Raunser S, Mougous JD. An Interbacterial NAD(P)(+) Glycohydrolase Toxin Requires Elongation Factor Tu for Delivery to Target Cells. Cell. 163: 607-19. PMID 26456113 DOI: 10.1016/J.Cell.2015.09.027 |
0.702 |
|
| 2015 |
Kilgour DPA, Van Orden SL, Tran BQ, Goo YA, Goodlett DR. Producing isotopic distribution models for fully apodized absorption mode FT-MS Analytical Chemistry. 87: 5797-5801. PMID 25938639 DOI: 10.1021/Acs.Analchem.5B01032 |
0.669 |
|
| 2015 |
Mojica SA, Hovis KM, Frieman MB, Tran B, Hsia RC, Ravel J, Jenkins-Houk C, Wilson KL, Bavoil PM. SINC, a type III secreted protein of Chlamydia psittaci, targets the inner nuclear membrane of infected cells and uninfected neighbors. Molecular Biology of the Cell. 26: 1918-34. PMID 25788290 DOI: 10.1091/Mbc.E14-11-1530 |
0.394 |
|
| 2015 |
Achermann Y, Tran B, Kang M, Harro JM, Shirtliff ME. Immunoproteomic Identification of In Vivo-Produced Propionibacterium acnes Proteins in a Rabbit Biofilm Infection Model. Clinical and Vaccine Immunology : Cvi. 22: 467-76. PMID 25694647 DOI: 10.1128/Cvi.00760-14 |
0.357 |
|
| 2015 |
LeRoux M, Kirkpatrick RL, Montauti EI, Tran BQ, Peterson SB, Harding BN, Whitney JC, Russell AB, Traxler B, Goo YA, Goodlett DR, Wiggins PA, Mougous JD. Kin cell lysis is a danger signal that activates antibacterial pathways of Pseudomonas aeruginosa. Elife. 4. PMID 25643398 DOI: 10.7554/Elife.05701 |
0.653 |
|
| 2015 |
LeRoux M, Kirkpatrick RL, Montauti EI, Tran BQ, Peterson SB, Harding BN, Whitney JC, Russell AB, Traxler B, Goo YA, Goodlett DR, Wiggins PA, Mougous JD. Author response: Kin cell lysis is a danger signal that activates antibacterial pathways of Pseudomonas aeruginosa Elife. DOI: 10.7554/Elife.05701.032 |
0.651 |
|
| 2014 |
Osborne J, Djapgne L, Tran BQ, Goo YA, Oglesby-Sherrouse AG. A method for in vivo identification of bacterial small RNA-binding proteins. Microbiologyopen. 3: 950-60. PMID 25351924 DOI: 10.1002/mbo3.220 |
0.653 |
|
| 2014 |
Russell AB, Wexler AG, Harding BN, Whitney JC, Bohn AJ, Goo YA, Tran BQ, Barry NA, Zheng H, Peterson SB, Chou S, Gonen T, Goodlett DR, Goodman AL, Mougous JD. A type VI secretion-related pathway in Bacteroidetes mediates interbacterial antagonism. Cell Host & Microbe. 16: 227-36. PMID 25070807 DOI: 10.1016/J.Chom.2014.07.007 |
0.704 |
|
| 2014 |
Whitney JC, Beck CM, Goo YA, Russell AB, Harding BN, De Leon JA, Cunningham DA, Tran BQ, Low DA, Goodlett DR, Hayes CS, Mougous JD. Genetically distinct pathways guide effector export through the type VI secretion system. Molecular Microbiology. 92: 529-42. PMID 24589350 DOI: 10.1111/Mmi.12571 |
0.702 |
|
| 2012 |
Ma ZQ, Polzin KO, Dasari S, Chambers MC, Schilling B, Gibson BW, Tran BQ, Vega-Montoto L, Liebler DC, Tabb DL. QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation. Analytical Chemistry. 84: 5845-50. PMID 22697456 DOI: 10.1021/Ac300629P |
0.348 |
|
| 2011 |
Tran BQ, Hernandez C, Waridel P, Potts A, Barblan J, Lisacek F, Quadroni M. Addressing trypsin bias in large scale (Phospho)proteome analysis by size exclusion chromatography and secondary digestion of large post-trypsin peptides Journal of Proteome Research. 10: 800-811. PMID 21166477 DOI: 10.1021/Pr100951T |
0.433 |
|
| 2008 |
Tran BQ, Loftheim H, Reubsaet L, Lundanes E, Greibrokk T. On-Line multitasking analytical proteomics: how to separate, reduce, alkylate and digest whole proteins in an on-Line multidimensional chromatography system coupled to MS. Journal of Separation Science. 31: 2913-23. PMID 18704998 DOI: 10.1002/Jssc.200800275 |
0.402 |
|
| 2008 |
Tran BQ, Pepaj M, Lundanes E, Greibrokk T. On-line method for identification of native proteins using pH-gradient SAX chromatography and reversed phase chromatography-mass spectrometry of tryptic peptides Journal of Liquid Chromatography and Related Technologies. 31: 1387-1411. DOI: 10.1080/10826070802039291 |
0.431 |
|
| 2007 |
Tran BQ, Pepaj M, Lundanes E, Greibrokk T. The behaviour of reduced, alkylated and native proteins in a pH-gradient LC system Chromatographia. 66: 709-715. DOI: 10.1365/S10337-007-0390-8 |
0.366 |
|
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