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Itamar Kass, Ph.D. - Publications

Affiliations: 
 
Area:
Protein dynamics, Drug design
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Webb CT, Yang W, Riley BT, Hayes BK, Sivaraman KK, Malcolm TR, Harrop S, Atkinson SC, Kass I, Buckle AM, Drinkwater N, McGowan S. A metal ion-dependent conformational switch modulates activity of the Plasmodium M17 aminopeptidase. The Journal of Biological Chemistry. 102119. PMID 35691342 DOI: 10.1016/j.jbc.2022.102119  0.541
2019 Fodor J, Riley BT, Kass I, Buckle AM, Borg NA. The Role of Conformational Dynamics in Abacavir-Induced Hypersensitivity Syndrome. Scientific Reports. 9: 10523. PMID 31324847 DOI: 10.1038/s41598-019-47001-1  0.542
2019 Marijanovic EM, Fodor J, Riley BT, Porebski BT, Costa MGS, Kass I, Hoke DE, McGowan S, Buckle AM. Reactive centre loop dynamics and serpin specificity. Scientific Reports. 9: 3870. PMID 30846766 DOI: 10.1038/s41598-019-40432-w  0.587
2018 Yang W, Riley B, Lei X, Porebski BT, Kass I, Buckle AM, McGowan S. Mapping the pathway and dynamics of bestatin inhibition of the Plasmodium falciparum M1 aminopeptidase, PfA-M1. Chemmedchem. PMID 30318749 DOI: 10.1002/cmdc.201800563  0.569
2018 Li C, Clark LVT, Zhang R, Porebski BT, McCoey JM, Borg NA, Webb GI, Kass I, Buckle M, Song J, Woolfson A, Buckle AM. Structural Capacitance in Protein Evolution and Human Diseases. Journal of Molecular Biology. PMID 30111491 DOI: 10.1016/j.jmb.2018.06.051  0.52
2017 Yang W, Riley BT, Lei X, Porebski BT, Kass I, Buckle AM, McGowan S. Generation of AMBER force field parameters for zinc centres of M1 and M17 family aminopeptidases. Journal of Biomolecular Structure & Dynamics. 1-29. PMID 28782419 DOI: 10.1080/07391102.2017.1364669  0.547
2016 Riley BT, Ilyichova O, Costa MG, Porebski BT, de Veer SJ, Swedberg JE, Kass I, Harris JM, Hoke DE, Buckle AM. Direct and indirect mechanisms of KLK4 inhibition revealed by structure and dynamics. Scientific Reports. 6: 35385. PMID 27767076 DOI: 10.1038/srep35385  0.567
2016 Porebski BT, Keleher S, Hollins JJ, Nickson AA, Marijanovic EM, Borg NA, Costa MG, Pearce MA, Dai W, Zhu L, Irving JA, Hoke DE, Kass I, Whisstock JC, Bottomley SP, et al. Smoothing a rugged protein folding landscape by sequence-based redesign. Scientific Reports. 6: 33958. PMID 27667094 DOI: 10.1038/srep33958  0.564
2015 Le SN, Porebski BT, McCoey J, Fodor J, Riley B, Godlewska M, Góra M, Czarnocka B, Banga JP, Hoke DE, Kass I, Buckle AM. Modelling of Thyroid Peroxidase Reveals Insights into Its Enzyme Function and Autoantigenicity. Plos One. 10: e0142615. PMID 26623656 DOI: 10.1371/journal.pone.0142615  0.553
2015 Riley BT, Broendum SS, Reboul CF, Cowieson NP, Costa MG, Kass I, Jackson C, Perahia D, Buckle AM, McGowan S. Dynamic Motion and Communication in the Streptococcal C1 Phage Lysin, PlyC. Plos One. 10: e0140219. PMID 26470022 DOI: 10.1371/Journal.Pone.0140219  0.58
2014 Kass I, Buckle AM, Borg NA. Understanding the structural dynamics of TCR-pMHC complex interactions. Trends in Immunology. 35: 604-612. PMID 25466310 DOI: 10.1016/j.it.2014.10.005  0.564
2014 Samson AL, Knaupp AS, Kass I, Kleifeld O, Marijanovic EM, Hughes VA, Lupton CJ, Buckle AM, Bottomley SP, Medcalf RL. Oxidation of an exposed methionine instigates the aggregation of glyceraldehyde-3-phosphate dehydrogenase. The Journal of Biological Chemistry. 289: 26922-36. PMID 25086035 DOI: 10.1074/jbc.M114.570275  0.534
2014 Kass I, Hoke DE, Costa MG, Reboul CF, Porebski BT, Cowieson NP, Leh H, Pennacchietti E, McCoey J, Kleifeld O, Borri Voltattorni C, Langley D, Roome B, Mackay IR, Christ D, et al. Cofactor-dependent conformational heterogeneity of GAD65 and its role in autoimmunity and neurotransmitter homeostasis. Proceedings of the National Academy of Sciences of the United States of America. 111: E2524-9. PMID 24927554 DOI: 10.1073/pnas.1403182111  0.561
2013 Wijeyewickrema LC, Yongqing T, Tran TP, Thompson PE, Viljoen JE, Coetzer TH, Duncan RC, Kass I, Buckle AM, Pike RN. Molecular determinants of the substrate specificity of the complement-initiating protease, C1r. The Journal of Biological Chemistry. 288: 15571-80. PMID 23589288 DOI: 10.1074/jbc.M113.451757  0.538
2012 Kass I, Knaupp AS, Bottomley SP, Buckle AM. Conformational properties of the disease-causing Z variant of α1-antitrypsin revealed by theory and experiment. Biophysical Journal. 102: 2856-65. PMID 22735536 DOI: 10.1016/j.bpj.2012.05.023  0.544
2011 Kass I, Reboul CF, Buckle AM. Computational methods for studying serpin conformational change and structural plasticity. Methods in Enzymology. 501: 295-323. PMID 22078540 DOI: 10.1016/B978-0-12-385950-1.00014-6  0.573
2008 Kwan AH, Macindoe I, Vukasin PV, Morris VK, Kass I, Gupte R, Mark AE, Templeton MD, Mackay JP, Sunde M. The Cys3-Cys4 loop of the hydrophobin EAS is not required for rodlet formation and surface activity. Journal of Molecular Biology. 382: 708-20. PMID 18674544 DOI: 10.1016/J.Jmb.2008.07.034  0.583
2006 Mukherjee P, Kass I, Arkin IT, Zanni MT. Structural disorder of the CD3zeta transmembrane domain studied with 2D IR spectroscopy and molecular dynamics simulations. The Journal of Physical Chemistry. B. 110: 24740-9. PMID 17134238 DOI: 10.1021/Jp0640530  0.647
2006 Arbely E, Granot Z, Kass I, Orly J, Arkin IT. A trimerizing GxxxG motif is uniquely inserted in the severe acute respiratory syndrome (SARS) coronavirus spike protein transmembrane domain. Biochemistry. 45: 11349-56. PMID 16981695 DOI: 10.1021/Bi060953V  0.627
2006 Mukherjee P, Kass I, Arkin IT, Arkin I, Zanni MT. Picosecond dynamics of a membrane protein revealed by 2D IR. Proceedings of the National Academy of Sciences of the United States of America. 103: 3528-33. PMID 16505377 DOI: 10.1073/Pnas.0508833103  0.649
2006 Kass I, Arkin IT. How pH opens a H+ channel: the gating mechanism of influenza A M2. Structure (London, England : 1993). 13: 1789-98. PMID 16338407 DOI: 10.1016/J.STR.2005.08.022  0.597
2004 Mukherjee P, Krummel AT, Fulmer EC, Kass I, Arkin IT, Zanni MT. Site-specific vibrational dynamics of the CD3zeta membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy. The Journal of Chemical Physics. 120: 10215-24. PMID 15268045 DOI: 10.1063/1.1718332  0.604
2004 Astrahan P, Kass I, Cooper MA, Arkin IT. A novel method of resistance for influenza against a channel-blocking antiviral drug. Proteins. 55: 251-7. PMID 15048819 DOI: 10.1002/prot.20018  0.565
2004 Kass I, Arbely E, Arkin IT. Modeling sample disorder in site-specific dichroism studies of uniaxial systems. Biophysical Journal. 86: 2502-7. PMID 15041686 DOI: 10.1016/S0006-3495(04)74305-2  0.59
2003 Arbely E, Kass I, Arkin IT. Site-specific dichroism analysis utilizing transmission FTIR. Biophysical Journal. 85: 2476-83. PMID 14507710 DOI: 10.1016/S0006-3495(03)74670-0  0.609
2002 Kass I, Horovitz A. Mapping pathways of allosteric communication in GroEL by analysis of correlated mutations. Proteins. 48: 611-7. PMID 12211028 DOI: 10.1002/Prot.10180  0.517
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