| Year |
Citation |
Score |
| 2023 |
Olendraite I, Brown K, Firth AE. Identification of RNA Virus-Derived RdRp Sequences in Publicly Available Transcriptomic Data Sets. Molecular Biology and Evolution. 40. PMID 37014783 DOI: 10.1093/molbev/msad060 |
0.347 |
|
| 2022 |
Kärblane K, Firth AE, Olspert A. Transcriptional Slippage Dynamics and Distribution in RNA Subpopulations. Molecular Plant-Microbe Interactions : Mpmi. 35: 835-844. PMID 35671468 DOI: 10.1094/MPMI-03-22-0060-R |
0.639 |
|
| 2022 |
Cook GM, Brown K, Shang P, Li Y, Soday L, Dinan AM, Tumescheit C, Mockett APA, Fang Y, Firth AE, Brierley I. Ribosome profiling of porcine reproductive and respiratory syndrome virus reveals novel features of viral gene expression. Elife. 11. PMID 35226596 DOI: 10.7554/eLife.75668 |
0.377 |
|
| 2022 |
Ivanov IP, Saba JA, Fan CM, Wang J, Firth AE, Cao C, Green R, Dever TE. Evolutionarily conserved inhibitory uORFs sensitize mRNA translation to start codon selection stringency. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35217614 DOI: 10.1073/pnas.2117226119 |
0.316 |
|
| 2021 |
Dietzgen RG, Firth AE, Jiāng D, Junglen S, Kondo H, Kuhn JH, Paraskevopoulou S, Vasilakis N, Ictv Report Consortium. ICTV Virus Taxonomy Profile: 2021. The Journal of General Virology. 102. PMID 34738886 DOI: 10.1099/jgv.0.001681 |
0.343 |
|
| 2021 |
Lulla V, Wandel MP, Bandyra KJ, Ulferts R, Wu M, Dendooven T, Yang X, Doyle N, Oerum S, Beale R, O'Rourke SM, Randow F, Maier HJ, Scott W, Ding Y, ... Firth AE, et al. Targeting the conserved stem loop 2 motif in the SARS-CoV-2 genome. Journal of Virology. PMID 33963053 DOI: 10.1128/JVI.00663-21 |
0.354 |
|
| 2020 |
Ho JSY, Angel M, Ma Y, Sloan E, Wang G, Martinez-Romero C, Alenquer M, Roudko V, Chung L, Zheng S, Chang M, Fstkchyan Y, Clohisey S, Dinan AM, Gibbs J, ... ... Firth AE, et al. Hybrid Gene Origination Creates Human-Virus Chimeric Proteins during Infection. Cell. PMID 32559462 DOI: 10.1016/J.Cell.2020.05.035 |
0.31 |
|
| 2019 |
Ficarelli M, Antzin-Anduetza I, Hugh-White R, Firth AE, Sertkaya H, Wilson H, Neil SJD, Schulz R, Swanson CM. CpG dinucleotides inhibit HIV-1 replication through zinc finger antiviral protein (ZAP)-dependent and -independent mechanisms. Journal of Virology. PMID 31748389 DOI: 10.1128/Jvi.01337-19 |
0.301 |
|
| 2019 |
Li Y, Firth AE, Brierley I, Cai Y, Napthine S, Wang T, Yan X, Kuhn JH, Fang Y. Programmed -2/-1 Ribosomal Frameshifting in Simarteriviruses: An Evolutionarily Conserved Mechanism. Journal of Virology. PMID 31167906 DOI: 10.1128/Jvi.00370-19 |
0.345 |
|
| 2019 |
Olendraite I, Brown K, Valles SM, Firth AE, Chen Y, Guérin DMA, Hashimoto Y, Herrero S, de Miranda JR, Ryabov E, Ictv Report Consortium. ICTV Virus Taxonomy Profile: Polycipiviridae. The Journal of General Virology. PMID 30835199 DOI: 10.1099/jgv.0.001241 |
0.348 |
|
| 2019 |
Brown K, Olendraite I, Valles SM, Firth AE, Chen Y, Guérin DMA, Hashimoto Y, Herrero S, de Miranda JR, Ryabov E, Ictv Report Consortium. ICTV Virus Taxonomy Profile: Solinviviridae. The Journal of General Virology. PMID 30835197 DOI: 10.1099/jgv.0.001242 |
0.384 |
|
| 2018 |
Stewart H, Olspert A, Butt BG, Firth AE. Propensity of a picornavirus polymerase to slip on potyvirus-derived transcriptional slippage sites. The Journal of General Virology. PMID 30507373 DOI: 10.1099/jgv.0.001189 |
0.639 |
|
| 2018 |
Charles J, Tangudu CS, Hurt SL, Tumescheit C, Firth AE, Garcia-Rejon JE, Machain-Williams C, Blitvich BJ. Detection of novel and recognized RNA viruses in mosquitoes from the Yucatan Peninsula of Mexico using metagenomics and characterization of their in vitro host ranges. The Journal of General Virology. PMID 30412047 DOI: 10.1099/Jgv.0.001165 |
0.307 |
|
| 2018 |
Stewart H, Brown K, Dinan AM, Irigoyen N, Snijder EJ, Firth AE. The transcriptional and translational landscape of equine torovirus. Journal of Virology. PMID 29950409 DOI: 10.1128/JVI.00589-18 |
0.397 |
|
| 2018 |
Nibert ML, Manny AR, Debat HJ, Firth AE, Bertini L, Caruso C. A barnavirus sequence mined from a transcriptome of the Antarctic pearlwort Colobanthus quitensis. Archives of Virology. PMID 29516246 DOI: 10.1007/S00705-018-3794-X |
0.4 |
|
| 2017 |
Charles J, Tangudu CS, Firth AE, Blitvich BJ. Complete genome sequences of two insect-specific flaviviruses. Archives of Virology. PMID 28918473 DOI: 10.1007/S00705-017-3552-5 |
0.352 |
|
| 2017 |
Olendraite I, Lukhovitskaya NI, Porter SD, Valles SM, Firth AE. Polycipiviridae: a proposed new family of polycistronic picorna-like RNA viruses. The Journal of General Virology. PMID 28857036 DOI: 10.1099/jgv.0.000902 |
0.38 |
|
| 2016 |
Valles SM, Oi DH, Becnel JJ, Wetterer JK, LaPolla JS, Firth AE. Isolation and characterization of Nylanderia fulva virus 1, a positive-sense, single-stranded RNA virus infecting the tawny crazy ant, Nylanderia fulva. Virology. 496: 244-254. PMID 27372180 DOI: 10.1016/J.Virol.2016.06.014 |
0.313 |
|
| 2016 |
Olspert A, Carr JP, Firth AE. Mutational analysis of the Potyviridae transcriptional slippage site utilized for expression of the P3N-PIPO and P1N-PISPO proteins. Nucleic Acids Research. PMID 27185887 DOI: 10.1093/Nar/Gkw441 |
0.657 |
|
| 2016 |
Irigoyen N, Firth AE, Jones JD, Chung BY, Siddell SG, Brierley I. High-Resolution Analysis of Coronavirus Gene Expression by RNA Sequencing and Ribosome Profiling. Plos Pathogens. 12: e1005473. PMID 26919232 DOI: 10.1371/journal.ppat.1005473 |
0.391 |
|
| 2016 |
Charles J, Firth AE, Loroño-Pino MA, Garcia-Rejon JE, Farfan-Ale JA, Lipkin WI, Blitvich BJ, Briese T. Merida virus, a putative novel rhabdovirus discovered in Culex and Ochlerotatus spp. mosquitoes in the Yucatan Peninsula of Mexico. The Journal of General Virology. PMID 26868915 DOI: 10.1099/Jgv.0.000424 |
0.344 |
|
| 2016 |
Untiveros M, Olspert A, Artola K, Firth AE, Kreuze JF, Valkonen JP. A novel sweet potato potyvirus open reading frame (ORF) is expressed via polymerase slippage and suppresses RNA silencing. Molecular Plant Pathology. 17: 1111-23. PMID 26757490 DOI: 10.1111/mpp.12366 |
0.639 |
|
| 2015 |
Olspert A, Chung BY, Atkins JF, Carr JP, Firth AE. Transcriptional slippage in the positive-sense RNA virus family Potyviridae. Embo Reports. PMID 26113364 DOI: 10.15252/Embr.201540509 |
0.66 |
|
| 2015 |
Smirnova E, Firth AE, Miller WA, Scheidecker D, Brault V, Reinbold C, Rakotondrafara AM, Chung BY, Ziegler-Graff V. Discovery of a Small Non-AUG-Initiated ORF in Poleroviruses and Luteoviruses That Is Required for Long-Distance Movement. Plos Pathogens. 11: e1004868. PMID 25946037 DOI: 10.1371/journal.ppat.1004868 |
0.355 |
|
| 2014 |
Li Y, Treffers EE, Napthine S, Tas A, Zhu L, Sun Z, Bell S, Mark BL, van Veelen PA, van Hemert MJ, Firth AE, Brierley I, Snijder EJ, Fang Y. Transactivation of programmed ribosomal frameshifting by a viral protein. Proceedings of the National Academy of Sciences of the United States of America. 111: E2172-81. PMID 24825891 DOI: 10.1073/Pnas.1321930111 |
0.372 |
|
| 2014 |
Jiang H, Franz CJ, Wu G, Renshaw H, Zhao G, Firth AE, Wang D. Orsay virus utilizes ribosomal frameshifting to express a novel protein that is incorporated into virions. Virology. 450: 213-21. PMID 24503084 DOI: 10.1016/J.Virol.2013.12.016 |
0.303 |
|
| 2013 |
Cook S, Chung BY, Bass D, Moureau G, Tang S, McAlister E, Culverwell CL, Glücksman E, Wang H, Brown TD, Gould EA, Harbach RE, de Lamballerie X, Firth AE. Novel virus discovery and genome reconstruction from field RNA samples reveals highly divergent viruses in dipteran hosts. Plos One. 8: e80720. PMID 24260463 DOI: 10.1371/journal.pone.0080720 |
0.36 |
|
| 2013 |
Ling R, Pate AE, Carr JP, Firth AE. An essential fifth coding ORF in the sobemoviruses. Virology. 446: 397-408. PMID 23830075 DOI: 10.1016/J.Virol.2013.05.033 |
0.629 |
|
| 2013 |
Emerson SU, Nguyen HT, Torian U, Mather K, Firth AE. An essential RNA element resides in a central region of hepatitis E virus ORF2 Journal of General Virology. 94: 1468-1476. PMID 23515023 DOI: 10.1099/vir.0.051870-0 |
0.367 |
|
| 2012 |
Fang Y, Treffers EE, Li Y, Tas A, Sun Z, van der Meer Y, de Ru AH, van Veelen PA, Atkins JF, Snijder EJ, Firth AE. Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein. Proceedings of the National Academy of Sciences of the United States of America. 109: E2920-8. PMID 23043113 DOI: 10.1073/pnas.1211145109 |
0.374 |
|
| 2011 |
Kim DY, Firth AE, Atasheva S, Frolova EI, Frolov I. Conservation of a packaging signal and the viral genome RNA packaging mechanism in alphavirus evolution. Journal of Virology. 85: 8022-36. PMID 21680508 DOI: 10.1128/Jvi.00644-11 |
0.358 |
|
| 2011 |
Baranov PV, Wills NM, Barriscale KA, Firth AE, Jud MC, Letsou A, Manning G, Atkins JF. Programmed ribosomal frameshifting in the expression of the regulator of intestinal stem cell proliferation, adenomatous polyposis coli (APC). Rna Biology. 8: 637-47. PMID 21593603 DOI: 10.4161/rna.8.4.15395 |
0.322 |
|
| 2011 |
Firth AE, Wills NM, Gesteland RF, Atkins JF. Stimulation of stop codon readthrough: frequent presence of an extended 3' RNA structural element. Nucleic Acids Research. 39: 6679-91. PMID 21525127 DOI: 10.1093/nar/gkr224 |
0.318 |
|
| 2011 |
Firth AE, Zevenhoven-Dobbe JC, Wills NM, Go YY, Balasuriya UB, Atkins JF, Snijder EJ, Posthuma CC. Discovery of a small arterivirus gene that overlaps the GP5 coding sequence and is important for virus production. The Journal of General Virology. 92: 1097-106. PMID 21307223 DOI: 10.1099/Vir.0.029264-0 |
0.372 |
|
| 2010 |
Firth AE, Blitvich BJ, Wills NM, Miller CL, Atkins JF. Evidence for ribosomal frameshifting and a novel overlapping gene in the genomes of insect-specific flaviviruses. Virology. 399: 153-66. PMID 20097399 DOI: 10.1016/J.Virol.2009.12.033 |
0.396 |
|
| 2010 |
Melian EB, Hinzman E, Nagasaki T, Firth AE, Wills NM, Nouwens AS, Blitvich BJ, Leung J, Funk A, Atkins JF, Hall R, Khromykh AA. NS1' of flaviviruses in the Japanese encephalitis virus serogroup is a product of ribosomal frameshifting and plays a role in viral neuroinvasiveness. Journal of Virology. 84: 1641-7. PMID 19906906 DOI: 10.1128/Jvi.01979-09 |
0.313 |
|
| 2008 |
Chung BY, Miller WA, Atkins JF, Firth AE. An overlapping essential gene in the Potyviridae. Proceedings of the National Academy of Sciences of the United States of America. 105: 5897-902. PMID 18408156 DOI: 10.1073/pnas.0800468105 |
0.392 |
|
| 2006 |
Chung BY, Simons C, Firth AE, Brown CM, Hellens RP. Effect of 5'UTR introns on gene expression in Arabidopsis thaliana. Bmc Genomics. 7: 120. PMID 16712733 DOI: 10.1186/1471-2164-7-120 |
0.312 |
|
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