Ruth E. Ley, Ph.D. - Publications

2001 University of Colorado, Boulder, Boulder, CO, United States 
Microbial ecology, Mycorrhizae

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Jackson M, Jeffery IB, Beaumont M, Bell JT, Clark AG, Ley RE, O'Toole PW, Spector TD, Steves CJ. Signatures of early frailty in the gut microbiota. Genome Medicine. 8: 8. PMID 26822992 DOI: 10.1186/s13073-016-0262-7  1
2015 Friedman ES, McPhillips LE, Werner JJ, Poole AC, Ley RE, Walter MT, Angenent LT. Methane Emission in a Specific Riparian-Zone Sediment Decreased with Bioelectrochemical Manipulation and Corresponded to the Microbial Community Dynamics. Frontiers in Microbiology. 6: 1523. PMID 26793170 DOI: 10.3389/fmicb.2015.01523  1
2015 Sun S, Lourie R, Cohen SB, Ji Y, Goodrich JK, Poole AC, Ley RE, Denkers EY, McGuckin MA, Long Q, Duhamel GE, Simpson KW, Qi L. Epithelial Sel1L is required for the maintenance of intestinal homeostasis. Molecular Biology of the Cell. PMID 26631554 DOI: 10.1091/mbc.E15-10-0724  1
2015 Blekhman R, Goodrich JK, Huang K, Sun Q, Bukowski R, Bell JT, Spector TD, Keinan A, Ley RE, Gevers D, Clark AG. Host genetic variation impacts microbiome composition across human body sites. Genome Biology. 16: 191. PMID 26374288 DOI: 10.1186/s13059-015-0759-1  1
2015 Chassaing B, Koren O, Goodrich JK, Poole AC, Srinivasan S, Ley RE, Gewirtz AT. Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome. Nature. 519: 92-6. PMID 25731162 DOI: 10.1038/nature14232  1
2014 Goodrich JK, Waters JL, Poole AC, Sutter JL, Koren O, Blekhman R, Beaumont M, Van Treuren W, Knight R, Bell JT, Spector TD, Clark AG, Ley RE. Human genetics shape the gut microbiome. Cell. 159: 789-99. PMID 25417156 DOI: 10.1016/j.cell.2014.09.053  1
2014 Huttenhower C, Knight R, Brown CT, Caporaso JG, Clemente JC, Gevers D, Franzosa EA, Kelley ST, Knights D, Ley RE, Mahurkar A, Ravel J, White O. Advancing the microbiome research community. Cell. 159: 227-30. PMID 25303518 DOI: 10.1016/j.cell.2014.09.022  1
2014 Ravel J, Blaser MJ, Braun J, Brown E, Bushman FD, Chang EB, Davies J, Dewey KG, Dinan T, Dominguez-Bello M, Erdman SE, Finlay BB, Garrett WS, Huffnagle GB, Huttenhower C, ... ... Ley RE, et al. Human microbiome science: Vision for the future, Bethesda, MD, July 24 to 26, 2013 Microbiome. 2.  1
2013 Cullender TC, Chassaing B, Janzon A, Kumar K, Muller CE, Werner JJ, Angenent LT, Bell ME, Hay AG, Peterson DA, Walter J, Vijay-Kumar M, Gewirtz AT, Ley RE. Innate and adaptive immunity interact to quench microbiome flagellar motility in the gut. Cell Host & Microbe. 14: 571-81. PMID 24237702 DOI: 10.1016/j.chom.2013.10.009  1
2013 Di Rienzi SC, Sharon I, Wrighton KC, Koren O, Hug LA, Thomas BC, Goodrich JK, Bell JT, Spector TD, Banfield JF, Ley RE. The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria. Elife. 2: e01102. PMID 24137540 DOI: 10.7554/eLife.01102  1
2013 Peiffer JA, Spor A, Koren O, Jin Z, Tringe SG, Dangl JL, Buckler ES, Ley RE. Diversity and heritability of the maize rhizosphere microbiome under field conditions. Proceedings of the National Academy of Sciences of the United States of America. 110: 6548-53. PMID 23576752 DOI: 10.1073/pnas.1302837110  1
2012 Lundberg DS, Lebeis SL, Paredes SH, Yourstone S, Gehring J, Malfatti S, Tremblay J, Engelbrektson A, Kunin V, del Rio TG, Edgar RC, Eickhorst T, Ley RE, Hugenholtz P, Tringe SG, et al. Defining the core Arabidopsis thaliana root microbiome. Nature. 488: 86-90. PMID 22859206 DOI: 10.1038/nature11237  1
2012 Brook SM, van Coeverden de Groot P, Scott C, Boag P, Long B, Ley RE, Reischer GH, Williams AC, Mahood SP, Hien TM, Polet G, Cox N, Hai BT. Integrated and novel survey methods for rhinoceros populations confirm the extinction of Rhinoceros sondaicus annamiticus from Vietnam Biological Conservation. 155: 59-67. DOI: 10.1016/j.biocon.2012.06.008  1
2011 Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Ley RE, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/nbt.1823  1
2010 Goodrich-Blair H, Ané JM, Bever JD, Bordenstein SR, Bright M, Chaston JM, Clay K, Currie CR, Douglas AE, Gerardo N, Harrison MJ, Ley RE, McFall-Ngai M, Mukherjee A, Rader B, et al. Symbiosis research, technology, and education: Proceedings of the 6th International Symbiosis Society Congress held in Madison Wisconsin, USA, August 2009 Symbiosis. 51: 1-12. DOI: 10.1007/s13199-010-0076-0  1
2009 Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI. A core gut microbiome in obese and lean twins. Nature. 457: 480-4. PMID 19043404 DOI: 10.1038/nature07540  1
2008 Feazel LM, Spear JR, Berger AB, Harris JK, Frank DN, Ley RE, Pace NR. Eucaryotic diversity in a hypersaline microbial mat. Applied and Environmental Microbiology. 74: 329-32. PMID 17993566 DOI: 10.1128/AEM.01448-07  1
2007 Xu J, Mahowald MA, Ley RE, Lozupone CA, Hamady M, Martens EC, Henrissat B, Coutinho PM, Minx P, Latreille P, Cordum H, Van Brunt A, Kim K, Fulton RS, Fulton LA, et al. Evolution of symbiotic bacteria in the distal human intestine. Plos Biology. 5: e156. PMID 17579514 DOI: 10.1371/journal.pbio.0050156  1
2006 Rawls JF, Mahowald MA, Ley RE, Gordon JI. Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell. 127: 423-33. PMID 17055441 DOI: 10.1016/j.cell.2006.08.043  1
2006 Ley RE, Harris JK, Wilcox J, Spear JR, Miller SR, Bebout BM, Maresca JA, Bryant DA, Sogin ML, Pace NR. Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat. Applied and Environmental Microbiology. 72: 3685-95. PMID 16672518 DOI: 10.1128/AEM.72.5.3685-3695.2006  1
2004 Schmidt SK, Lipson DA, Ley RE, Fisk MC, West AE. Impacts of chronic nitrogen additions vary seasonally and by microbial functional group in tundra soils Biogeochemistry. 69: 1-17. DOI: 10.1023/B:BIOG.0000031028.53116.9b  1
2004 Cleveland CC, Townsend AR, Constance BC, Ley RE, Schmidt SK. Soil microbial dynamics in Costa Rica: Seasonal and biogeochemical constraints Biotropica. 36: 184-195.  1
2004 Ley RE, Williams MW, Schmidt SK. Microbial population dynamics in an extreme environment: Controlling factors in talus soils at 3750 m in the Colorado Rocky Mountains Biogeochemistry. 68: 313-335.  1
2003 Spear JR, Ley RE, Berger AB, Pace NR. Complexity in natural microbial ecosystems: the Guerrero Negro experience. The Biological Bulletin. 204: 168-73. PMID 12700148  1
2002 Ley RE, Schmidt SK. Fungal and bacterial responses to phenolic compounds and amino acids in high altitude barren soils Soil Biology and Biochemistry. 34: 989-995. DOI: 10.1016/S0038-0717(02)00032-9  1
2001 González G, Ley RE, Schmidt SK, Zou X, Seastedt TR. Soil ecological interactions: comparisons between tropical and subalpine forests. Oecologia. 128: 549-556. PMID 28547400 DOI: 10.1007/s004420100685  1
2001 González G, Ley RE, Schmidt SK, Zou X, Seastedt TR. Soil ecological interactions: Comparisons between tropical and subalpine forests Oecologia. 128: 549-556. DOI: 10.1007/s004420100685  1
2001 Ley RE, Lipson DA, Schmidt SK. Division S-3 - Soil biology & biochemistry: Microbial biomass levels in barren and vegetated high altitude talus soils Soil Science Society of America Journal. 65: 111-117.  1
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