Elizabeth K. Costello, Ph.D. - Publications

Affiliations: 
2007 Ecology and Evolutionary Biology University of Colorado, Boulder, Boulder, CO, United States 
Area:
Microbial ecology, Mycorrhizae

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Bik EM, Costello EK, Switzer AD, Callahan BJ, Holmes SP, Wells RS, Carlin KP, Jensen ED, Venn-Watson S, Relman DA. Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea. Nature Communications. 7: 10516. PMID 26839246 DOI: 10.1038/ncomms10516  0.76
2015 DiGiulio DB, Callahan BJ, McMurdie PJ, Costello EK, Lyell DJ, Robaczewska A, Sun CL, Goltsman DS, Wong RJ, Shaw G, Stevenson DK, Holmes SP, Relman DA. Temporal and spatial variation of the human microbiota during pregnancy. Proceedings of the National Academy of Sciences of the United States of America. 112: 11060-5. PMID 26283357 DOI: 10.1073/pnas.1502875112  0.76
2014 Costello EK, Relman DA. Population health: immaturity in the gut microbial community. Nature. 510: 344-5. PMID 24896185 DOI: 10.1038/nature13347  0.76
2013 Costello EK, Carlisle EM, Bik EM, Morowitz MJ, Relman DA. Microbiome assembly across multiple body sites in low-birthweight infants. Mbio. 4: e00782-13. PMID 24169577 DOI: 10.1128/mBio.00782-13  0.76
2013 Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL. Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110: 17059-64. PMID 24062455 DOI: 10.1073/pnas.1306070110  0.76
2013 Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, Caporaso JG, Knights D, Clemente JC, Nakielny S, Gordon JI, Fierer N, Knight R. Cohabiting family members share microbiota with one another and with their dogs. Elife. 2: e00458. PMID 23599893 DOI: 10.7554/eLife.00458  0.76
2013 Pantoja-Feliciano IG, Clemente JC, Costello EK, Perez ME, Blaser MJ, Knight R, Dominguez-Bello MG. Biphasic assembly of the murine intestinal microbiota during early development. The Isme Journal. 7: 1112-5. PMID 23535917 DOI: 10.1038/ismej.2013.15  0.76
2013 Lin A, Bik EM, Costello EK, Dethlefsen L, Haque R, Relman DA, Singh U. Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States. Plos One. 8: e53838. PMID 23349750 DOI: 10.1371/journal.pone.0053838  0.76
2013 Sharon I, Morowitz MJ, Thomas BC, Costello EK, Relman DA, Banfield JF. Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization. Genome Research. 23: 111-20. PMID 22936250 DOI: 10.1101/gr.142315.112  0.76
2012 Costello EK, Stagaman K, Dethlefsen L, Bohannan BJ, Relman DA. The application of ecological theory toward an understanding of the human microbiome. Science (New York, N.Y.). 336: 1255-62. PMID 22674335 DOI: 10.1126/science.1224203  0.76
2011 Bowers RM, Sullivan AP, Costello EK, Collett JL, Knight R, Fierer N. Sources of bacteria in outdoor air across cities in the midwestern United States Applied and Environmental Microbiology. 77: 6350-6356. PMID 21803902 DOI: 10.1128/AEM.05498-11  0.76
2011 Caporaso JG, Lauber CL, Costello EK, Berg-Lyons D, Gonzalez A, Stombaugh J, Knights D, Gajer P, Ravel J, Fierer N, Gordon JI, Knight R. Moving pictures of the human microbiome. Genome Biology. 12: R50. PMID 21624126 DOI: 10.1186/gb-2011-12-5-r50  0.76
2011 Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Costello EK, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/nbt.1823  0.76
2011 Nemergut DR, Costello EK, Hamady M, Lozupone C, Jiang L, Schmidt SK, Fierer N, Townsend AR, Cleveland CC, Stanish L, Knight R. Global patterns in the biogeography of bacterial taxa. Environmental Microbiology. 13: 135-44. PMID 21199253 DOI: 10.1111/j.1462-2920.2010.02315.x  0.76
2011 Morowitz MJ, Denef VJ, Costello EK, Thomas BC, Poroyko V, Relman DA, Banfield JF. Strain-resolved community genomic analysis of gut microbial colonization in a premature infant. Proceedings of the National Academy of Sciences of the United States of America. 108: 1128-33. PMID 21191099 DOI: 10.1073/pnas.1010992108  0.76
2011 Knights D, Costello EK, Knight R. Supervised classification of human microbiota. Fems Microbiology Reviews. 35: 343-59. PMID 21039646 DOI: 10.1111/j.1574-6976.2010.00251.x  0.76
2011 Morowitz MJ, Denef VJ, Costello EK, Thomas BC, Poroyko V, Relman DA, Banfield JF. Strain-resolved community genomic analysis of gut microbial colonization in a premature infant (Proceedings of the National Academy of Sciences of the United States of America (2011) 108, 3 (1128-1133) DOI: 10.1073/pnas.1010992108) Proceedings of the National Academy of Sciences of the United States of America. 108: 4512. DOI: 10.1073/pnas.1102689108  0.76
2010 Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, Knights D, Koren O, Fierer N, Kelley ST, Ley RE, Gordon JI, Knight R. Direct sequencing of the human microbiome readily reveals community differences. Genome Biology. 11: 210. PMID 20441597 DOI: 10.1186/gb-2010-11-5-210  0.76
2010 Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, et al. QIIME allows analysis of high-throughput community sequencing data. Nature Methods. 7: 335-6. PMID 20383131 DOI: 10.1038/nmeth.f.303  0.76
2010 Fierer N, Lauber CL, Zhou N, McDonald D, Costello EK, Knight R. Forensic identification using skin bacterial communities. Proceedings of the National Academy of Sciences of the United States of America. 107: 6477-81. PMID 20231444 DOI: 10.1073/pnas.1000162107  0.76
2009 Robeson MS, Costello EK, Freeman KR, Whiting J, Adams B, Martin AP, Schmidt SK. Environmental DNA sequencing primers for eutardigrades and bdelloid rotifers. Bmc Ecology. 9: 25. PMID 20003362 DOI: 10.1186/1472-6785-9-25  0.76
2009 Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Bacterial community variation in human body habitats across space and time. Science (New York, N.Y.). 326: 1694-7. PMID 19892944 DOI: 10.1126/science.1177486  0.76
2009 Crawford PA, Crowley JR, Sambandam N, Muegge BD, Costello EK, Hamady M, Knight R, Gordon JI. Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation. Proceedings of the National Academy of Sciences of the United States of America. 106: 11276-81. PMID 19549860 DOI: 10.1073/pnas.0902366106  0.76
2009 Freeman KR, Pescador MY, Reed SC, Costello EK, Robeson MS, Schmidt SK. Soil CO2 flux and photoautotrophic community composition in high-elevation, 'barren' soil. Environmental Microbiology. 11: 674-86. PMID 19187281 DOI: 10.1111/j.1462-2920.2008.01844.x  0.76
2009 Costello EK, Halloy SR, Reed SC, Sowell P, Schmidt SK. Fumarole-supported islands of biodiversity within a hyperarid, high-elevation landscape on Socompa Volcano, Puna de Atacama, Andes. Applied and Environmental Microbiology. 75: 735-47. PMID 19074608 DOI: 10.1128/AEM.01469-08  0.76
2008 Schmidt SK, Reed SC, Nemergut DR, Grandy AS, Cleveland CC, Weintraub MN, Hill AW, Costello EK, Meyer AF, Neff JC, Martin AM. The earliest stages of ecosystem succession in high-elevation (5000 metres above sea level), recently deglaciated soils. Proceedings. Biological Sciences / the Royal Society. 275: 2793-802. PMID 18755677 DOI: 10.1098/rspb.2008.0808  0.76
2007 Schmidt SK, Costello EK, Nemergut DR, Cleveland CC, Reed SC, Weintraub MN, Meyer AF, Martin AM. Biogeochemical consequences of rapid microbial turnover and seasonal succession in soil. Ecology. 88: 1379-85. PMID 17601130 DOI: 10.1890/06-0164  0.76
2006 Costello EK, Schmidt SK. Microbial diversity in alpine tundra wet meadow soil: novel Chloroflexi from a cold, water-saturated environment. Environmental Microbiology. 8: 1471-86. PMID 16872409 DOI: 10.1111/j.1462-2920.2006.01041.x  0.76
2005 Nemergut DR, Costello EK, Meyer AF, Pescador MY, Weintraub MN, Schmidt SK. Structure and function of alpine and arctic soil microbial communities. Research in Microbiology. 156: 775-84. PMID 15922566 DOI: 10.1016/j.resmic.2005.03.004  0.76
2004 Martin AP, Costello EK, Meyer AF, Nemergut DR, Schmidt SK. The rate and pattern of cladogenesis in microbes. Evolution; International Journal of Organic Evolution. 58: 946-55. PMID 15212376  0.76
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