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Mary Berbee, PhD - Publications

Affiliations: 
Botany University of British Columbia, Vancouver, Vancouver, BC, Canada 
Area:
Mycology, evolution, systematics
Website:
http://www.botany.ubc.ca/people/mberbee.html
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Berbee ML, Strullu-Derrien C, Delaux PM, Strother PK, Kenrick P, Selosse MA, Taylor JW. Genomic and fossil windows into the secret lives of the most ancient fungi. Nature Reviews. Microbiology. PMID 32908302 DOI: 10.1038/S41579-020-0426-8  0.45
2020 Le Renard L, Stockey RA, Upchurch G, Berbee ML. A new epiphyllous fly-speck fungus from the Early Cretaceous Potomac Group of Virginia (125-112 Ma): , gen. et sp. nov. Mycologia. 1-15. PMID 32167869 DOI: 10.1080/00275514.2020.1718441  0.315
2017 Bazzicalupo AL, Buyck B, Saar I, Vauras J, Carmean D, Berbee ML. Troubles with mycorrhizal mushroom identification where morphological differentiation lags behind barcode sequence divergence Taxon. 66: 791-810. DOI: 10.12705/664.1  0.415
2016 Spatafora JW, Chang Y, Benny GL, Lazarus K, Smith ME, Berbee ML, Bonito G, Corradi N, Grigoriev I, Gryganskyi A, James TY, O'Donnell K, Roberson RW, Taylor TN, Uehling J, et al. A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data. Mycologia. 108: 1028-1046. PMID 27738200 DOI: 10.3852/16-042  0.551
2015 Chang Y, Wang S, Sekimoto S, Aerts AL, Choi C, Clum A, LaButti KM, Lindquist EA, Yee Ngan C, Ohm RA, Salamov AA, Grigoriev IV, Spatafora JW, Berbee ML. Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants. Genome Biology and Evolution. 7: 1590-601. PMID 25977457 DOI: 10.1093/Gbe/Evv090  0.302
2015 Dee J, Mollicone MR, Longcore JE, Roberson RW, Berbee M. Cytology and molecular phylogenetics of Monoblepharidomycetes provide evidence for multiple independent origins of the hyphal habit in the Fungi. Mycologia. PMID 25911696 DOI: 10.3852/14-275  0.314
2014 Bose T, Reynolds DR, Berbee ML. Common, unsightly and until now undescribed: Fumiglobus pieridicola sp. nov., a sooty mold infesting Pieris japonica from western North America. Mycologia. 106: 746-56. PMID 24891416 DOI: 10.3852/13-288  0.356
2011 Sekimoto S, Rochon D, Long JE, Dee JM, Berbee ML. A multigene phylogeny of Olpidium and its implications for early fungal evolution. Bmc Evolutionary Biology. 11: 331. PMID 22085768 DOI: 10.1186/1471-2148-11-331  0.369
2011 Harrower E, Ammirati JF, Cappuccino AA, Ceska O, Kranabetter JM, Kroeger P, Lim S, Taylor T, Berbee ML. Cortinarius species diversity in British Columbia and molecular phylogenetic comparison with European specimen sequences Botany. 89: 799-810. DOI: 10.1139/b11-065  0.418
2010 Berbee ML, Taylor JW. Dating the molecular clock in fungi - how close are we? Fungal Biology Reviews. 24: 1-16. DOI: 10.1016/J.Fbr.2010.03.001  0.425
2009 Stajich JE, Berbee ML, Blackwell M, Hibbett DS, James TY, Spatafora JW, Taylor JW. The fungi. Current Biology : Cb. 19: R840-5. PMID 19788875 DOI: 10.1016/J.Cub.2009.07.004  0.633
2009 Tsui CK, Marshall W, Yokoyama R, Honda D, Lippmeier JC, Craven KD, Peterson PD, Berbee ML. Labyrinthulomycetes phylogeny and its implications for the evolutionary loss of chloroplasts and gain of ectoplasmic gliding. Molecular Phylogenetics and Evolution. 50: 129-40. PMID 18977305 DOI: 10.1016/j.ympev.2008.09.027  0.573
2008 Bruns TD, Blackwell M, Edwards I, Taylor AFS, Horton T, Zhang N, Kõljalg U, May G, Kuyper TW, Bever JD, Gilbert G, Taylor JW, DeSantis TZ, Pringle A, Borneman J, ... ... Berbee M, et al. Preserving accuracy in GenBank Science. 319: 1616. PMID 18356505 DOI: 10.1126/Science.319.5870.1616A  0.388
2007 Tsui CK, Sivichai S, Rossman AY, Berbee ML. Tubeufia asiana, the teleomorph of Aquaphila albicans in the tubeufiaceae, pleosporales, based on cultural and molecular data. Mycologia. 99: 884-94. PMID 18333512 DOI: 10.3852/mycologia.99.6.884  0.596
2007 Berbee ML, Taylor JW. Rhynie chert: a window into a lost world of complex plant-fungus interactions. The New Phytologist. 174: 475-9. PMID 17447903 DOI: 10.1111/J.1469-8137.2007.02080.X  0.31
2006 Taylor JW, Berbee ML. Dating divergences in the Fungal Tree of Life: review and new analyses. Mycologia. 98: 838-49. PMID 17486961 DOI: 10.3852/Mycologia.98.6.838  0.418
2006 Tsui CK, Sivichai S, Berbee ML. Molecular systematics of Helicoma, Helicomyces and Helicosporium and their teleomorphs inferred from rDNA sequences. Mycologia. 98: 94-104. PMID 16800307 DOI: 10.3852/mycologia.98.1.94  0.59
2006 Tsui CK, Berbee ML. Phylogenetic relationships and convergence of helicosporous fungi inferred from ribosomal DNA sequences. Molecular Phylogenetics and Evolution. 39: 587-97. PMID 16529956 DOI: 10.1016/j.ympev.2006.01.025  0.605
2004 Inderbitzin P, Lim SR, Volkmann-Kohlmeyer B, Kohlmeyer J, Berbee ML. The phylogenetic position of Spathulospora based on DNA sequences from dried herbarium material. Mycological Research. 108: 737-48. PMID 15446706 DOI: 10.1017/S0953756204000206  0.356
2001 Zhang G, Berbee ML. Pyrenophora phylogenetics inferred from ITS and glyceradehyde-3-phosphate dehydrogenase gene sequences Mycologia. 93: 1048-1063.  0.358
2000 Ganders FR, Berbee M, Pirseyedi M. ITS base sequence phylogeny in Bidens (Asteraceae): Evidence for the continental relatives of Hawaiian and Marquesan Bidens Systematic Botany. 25: 122-133.  0.403
1999 Sussmann AV, Mable BK, DeWreede RE, Berbee ML. Identification of green algal endophytes as the alternate phase of Acrosiphonia (Codiolales, Chlorophyta) using ITS1 and ITS2 ribosomal DNA sequence data Journal of Phycology. 35: 607-614. DOI: 10.1046/J.1529-8817.1999.3530607.X  0.332
1999 Berbee ML, Pirseyedi M, Hubbard S. Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences Mycologia. 91: 964-977.  0.349
1999 Kim SC, Crawford DJ, Tadesse M, Berbee M, Ganders FR, Pirseyedi M, Esselman EJ. ITS sequences and phylogenetic relationships in Bidens and Coreopsis (Asteraceae) Systematic Botany. 24: 480-493.  0.416
1998 Thell A, Berbee M, Miao V. Phylogeny within the genus platismatia based on rDNA its sequences (lichenized ascomycota) Cryptogamie: Bryologie Et Lichenologie. 19: 307-319.  0.432
1996 LoBuglio KF, Berbee ML, Taylor JW. Phylogenetic origins of the asexual mycorrhizal symbiont Cenococcum geophilum Fr. and other mycorrhizal fungi among the ascomycetes. Molecular Phylogenetics and Evolution. 6: 287-94. PMID 8899729 DOI: 10.1006/Mpev.1996.0077  0.536
1996 Berbee ML. Loculoascomycete origins and evolution of filamentous ascomycete morphology based on 18S rRNA gene sequence data. Molecular Biology and Evolution. 13: 462-70. PMID 8742635  0.313
1995 Berbee ML, Taylor JW. From 18S ribosomal sequence data to evolution of morphology among the fungi Canadian Journal of Botany. 73: 677-683. DOI: 10.1139/B95-310  0.571
1992 Berbee ML, Taylor JW. Two ascomycete classes based on fruiting-body characters and ribosomal DNA sequence. Molecular Biology and Evolution. 9: 278-84. PMID 1560763 DOI: 10.1093/Oxfordjournals.Molbev.A040719  0.461
1992 Berbee ML, Kloeckener B, Taylor JW. Yeast biology. Science (New York, N.Y.). 257: 1610-1. PMID 1529345  0.383
1992 Carmean D, Kimsey LS, Berbee ML. 18S rDNA sequences and the holometabolous insects. Molecular Phylogenetics and Evolution. 1: 270-8. PMID 1342942 DOI: 10.1016/1055-7903(92)90002-X  0.411
1992 Berbee ML, Taylor JW. Convergence in ascospore discharge mechanism among pyrenomycete fungi based on 18S ribosomal RNA gene sequence. Molecular Phylogenetics and Evolution. 1: 59-71. PMID 1342925 DOI: 10.1016/1055-7903(92)90036-G  0.51
1992 Berbee ML, Taylor JW. Detecting morphological convergence in true fungi, using 18S rRNA gene sequence data. Bio Systems. 28: 117-25. PMID 1292657 DOI: 10.1016/0303-2647(92)90014-P  0.571
1992 Berbee ML, Taylor JW. 18S Ribosomal RNA gene sequence characters place the human pathogenSporothrix schenckii in the genusOphiostoma Experimental Mycology. 16: 87-91. DOI: 10.1016/0147-5975(92)90044-R  0.51
1989 Berbee ML, Wells K. Light and Electron Microscopic Studies of Meiosis and Basidium Ontogeny in Clavicorona Pyxidata Mycologia. 81: 20-41. DOI: 10.1080/00275514.1989.12025621  0.329
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