| Year |
Citation |
Score |
| 2022 |
Rizzo S, Sikorski E, Hart W, Gerristen J, Lazzarra M, White F, Thévenin D. Development of Tumor-selective Transmembrane Peptides to Promote the Activity of the Receptor Protein Tyrosine Phosphatase J by Disrupting its Homodimerization. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 35552736 DOI: 10.1096/fasebj.2022.36.S1.R3882 |
0.322 |
|
| 2021 |
Stopfer LE, Conage-Pough JE, White FM. Quantitative consequences of protein carriers in immunopeptidomics and tyrosine phosphorylation MS analyses. Molecular & Cellular Proteomics : McP. 100104. PMID 34052394 DOI: 10.1016/j.mcpro.2021.100104 |
0.313 |
|
| 2020 |
Stopfer LE, Mesfin JM, Joughin BA, Lauffenburger DA, White FM. Multiplexed relative and absolute quantitative immunopeptidomics reveals MHC I repertoire alterations induced by CDK4/6 inhibition. Nature Communications. 11: 2760. PMID 32488085 DOI: 10.1038/S41467-020-16588-9 |
0.394 |
|
| 2019 |
Dittmann A, Kennedy NJ, Soltero NL, Morshed N, Mana MD, Yilmaz ÖH, Davis RJ, White FM. High-fat diet in a mouse insulin-resistant model induces widespread rewiring of the phosphotyrosine signaling network. Molecular Systems Biology. 15: e8849. PMID 31464373 DOI: 10.15252/Msb.20198849 |
0.33 |
|
| 2019 |
Jaeger AM, Stopfer L, Lee S, Gaglia G, Sandel D, Santagata S, Lin NU, Trepel JB, White FM, Jacks T, Lindquist S, Whitesell L. Rebalancing protein homeostasis enhances tumor antigen presentation. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 31213460 DOI: 10.1158/1078-0432.Ccr-19-0596 |
0.342 |
|
| 2019 |
Del Rosario BC, Kriz AJ, Del Rosario AM, Anselmo A, Frye CJ, White FM, Sadreyev RI, Lee JT. Exploration of CTCF post-translation modifications uncovers Serine-224 phosphorylation by PLK1 at pericentric regions during the G2/M transition. Elife. 8. PMID 30676316 DOI: 10.7554/Elife.42341 |
0.646 |
|
| 2019 |
Schwill M, Tamaskovic R, Gajadhar AS, Kast F, White FM, Plückthun A. Systemic analysis of tyrosine kinase signaling reveals a common adaptive response program in a HER2-positive breast cancer. Science Signaling. 12. PMID 30670633 DOI: 10.1126/Scisignal.Aau2875 |
0.428 |
|
| 2018 |
Rothenberg DA, Taliaferro JM, Huber SM, Begley TJ, Dedon PC, White FM. A Proteomics Approach to Profiling the Temporal Translational Response to Stress and Growth. Iscience. 9: 367-381. PMID 30466063 DOI: 10.1016/J.Isci.2018.11.004 |
0.312 |
|
| 2018 |
Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, ... ... White FM, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576 |
0.769 |
|
| 2018 |
Johnson H, White FM. Quantitative Analysis of Tyrosine Kinase Signaling Across Differentially Embedded Human Glioblastoma Tumors. Methods in Molecular Biology (Clifton, N.J.). 1711: 149-164. PMID 29344889 DOI: 10.1007/978-1-4939-7493-1_8 |
0.563 |
|
| 2018 |
Flashner-Abramson E, Abramson J, White FM, Kravchenko-Balasha N. A thermodynamic-based approach for the resolution and prediction of protein network structures Chemical Physics. 514: 20-30. DOI: 10.1016/J.Chemphys.2018.03.005 |
0.339 |
|
| 2017 |
Soltis AR, Kennedy NJ, Xin X, Zhou F, Ficarro SB, Yap YS, Matthews BJ, Lauffenburger DA, White FM, Marto JA, Davis RJ, Fraenkel E. Hepatic Dysfunction Caused by Consumption of a High-Fat Diet. Cell Reports. 21: 3317-3328. PMID 29241556 DOI: 10.1016/J.Celrep.2017.11.059 |
0.651 |
|
| 2017 |
Jadwin JA, Curran TG, Lafontaine AT, White FM, Mayer BJ. Src Homology 2 domains enhance tyrosine phosphorylation in vivo by protecting binding sites in their target proteins from dephosphorylation. The Journal of Biological Chemistry. PMID 29162725 DOI: 10.1074/Jbc.M117.794412 |
0.346 |
|
| 2017 |
Emdal KB, Dittmann A, Reddy RJ, Lescarbeau RS, Moores SL, Laquerre S, White FM. Characterization of in vivo resistance to osimertinib and JNJ-61186372, an EGFR/Met bi-specific antibody, reveals unique and consensus mechanisms of resistance. Molecular Cancer Therapeutics. PMID 28830985 DOI: 10.1158/1535-7163.Mct-17-0413 |
0.345 |
|
| 2017 |
Valdez J, Cook CD, Ahrens CC, Wang AJ, Brown A, Kumar M, Stockdale L, Rothenberg D, Renggli K, Gordon E, Lauffenburger D, White F, Griffith L. On-demand dissolution of modular, synthetic extracellular matrix reveals local epithelial-stromal communication networks. Biomaterials. 130: 90-103. PMID 28371736 DOI: 10.1016/J.Biomaterials.2017.03.030 |
0.358 |
|
| 2016 |
Pirhaji L, Milani P, Leidl M, Curran T, Avila-Pacheco J, Clish CB, White FM, Saghatelian A, Fraenkel E. Revealing disease-associated pathways by network integration of untargeted metabolomics. Nature Methods. PMID 27479327 DOI: 10.1038/Nmeth.3940 |
0.317 |
|
| 2016 |
Tuncbag N, Milani P, Pokorny JL, Johnson H, Sio TT, Dalin S, Iyekegbe DO, White FM, Sarkaria JN, Fraenkel E. Network Modeling Identifies Patient-specific Pathways in Glioblastoma. Scientific Reports. 6: 28668. PMID 27354287 DOI: 10.1038/Srep28668 |
0.538 |
|
| 2016 |
Jadwin JA, Oh D, Curran TG, Ogiue-Ikeda M, Jia L, White FM, Machida K, Yu J, Mayer BJ. Time-resolved multimodal analysis of Src Homology 2 (SH2) domain binding in signaling by receptor tyrosine kinases. Elife. 5. PMID 27071344 DOI: 10.7554/Elife.11835 |
0.341 |
|
| 2016 |
White FM, Wolf-Yadlin A. Methods for the Analysis of Protein Phosphorylation-Mediated Cellular Signaling Networks. Annual Review of Analytical Chemistry (Palo Alto, Calif.). PMID 27049636 DOI: 10.1146/Annurev-Anchem-071015-041542 |
0.383 |
|
| 2016 |
Kravchenko-Balasha N, Johnson H, White FM, Heath JR, Levine RD. A Thermodynamic Based Interpretation of Protein Expression Heterogeneity in Different GBM Tumors Identifies Tumor Specific Unbalanced Processes. The Journal of Physical Chemistry. B. PMID 27035264 DOI: 10.1021/Acs.Jpcb.6B01692 |
0.507 |
|
| 2016 |
Lescarbeau RS, Lei L, Bakken KK, Sims PA, Sarkaria JN, Canoll P, White FM. Quantitative phosphoproteomics reveals Wee1 kinase as a therapeutic target in a model of proneural glioblastoma. Molecular Cancer Therapeutics. PMID 27009214 DOI: 10.1158/1535-7163.Mct-15-0692-T |
0.374 |
|
| 2016 |
Reddy RJ, Gajadhar AS, Swenson EJ, Rothenberg DA, Curran TG, White FM. Early signaling dynamics of the epidermal growth factor receptor. Proceedings of the National Academy of Sciences of the United States of America. PMID 26929352 DOI: 10.1073/Pnas.1521288113 |
0.39 |
|
| 2016 |
Reddy RJ, Curran TG, Zhang Y, White FM. Measurement of Phosphorylated Peptides with Absolute Quantification. Methods in Molecular Biology (Clifton, N.J.). 1410: 281-92. PMID 26867751 DOI: 10.1007/978-1-4939-3524-6_17 |
0.402 |
|
| 2016 |
Rothenberg DA, Gordon EA, White FM, Lourido S. Identification of Direct Kinase Substrates Using Analogue-Sensitive Alleles. Methods in Molecular Biology (Clifton, N.J.). 1355: 71-84. PMID 26584919 DOI: 10.1007/978-1-4939-3049-4_5 |
0.376 |
|
| 2016 |
Jadwin JA, Oh D, Curran TG, Ogiue-Ikeda M, Jia L, White FM, Machida K, Yu J, Mayer BJ. Author response: Time-resolved multimodal analysis of Src Homology 2 (SH2) domain binding in signaling by receptor tyrosine kinases Elife. DOI: 10.7554/Elife.11835.028 |
0.322 |
|
| 2015 |
Hughes SK, Oudin MJ, Tadros J, Neil J, Del Rosario A, Joughin BA, Ritsma L, Wyckoff J, Vasile E, Eddy R, Philippar U, Lussiez A, Condeelis JS, van Rheenen J, White F, et al. PTP1B-dependent regulation of receptor tyrosine kinase signaling by the actin-binding protein Mena. Molecular Biology of the Cell. PMID 26337385 DOI: 10.1091/Mbc.E15-06-0442 |
0.648 |
|
| 2015 |
Bryson BD, White FM. Quantitative Profiling of Lysine Acetylation Reveals Dynamic Crosstalk between Receptor Tyrosine Kinases and Lysine Acetylation. Plos One. 10: e0126242. PMID 25978619 DOI: 10.1371/Journal.Pone.0126242 |
0.38 |
|
| 2015 |
Gajadhar AS, Johnson H, Slebos RJ, Shaddox K, Wiles K, Washington MK, Herline AJ, Levine DA, Liebler DC, White FM. Phosphotyrosine signaling analysis in human tumors is confounded by systemic ischemia-driven artifacts and intra-specimen heterogeneity. Cancer Research. 75: 1495-503. PMID 25670172 DOI: 10.1158/0008-5472.Can-14-2309 |
0.532 |
|
| 2015 |
Bryson BD, Del Rosario AM, Gootenberg JS, Yaffe MB, White FM. Engineered bromodomains to explore the acetylproteome. Proteomics. 15: 1470-5. PMID 25641834 DOI: 10.1002/Pmic.201400401 |
0.679 |
|
| 2015 |
Curran TG, Zhang Y, Ma DJ, Sarkaria JN, White FM. MARQUIS: a multiplex method for absolute quantification of peptides and posttranslational modifications. Nature Communications. 6: 5924. PMID 25581283 DOI: 10.1038/Ncomms6924 |
0.453 |
|
| 2015 |
Shah AK, Sachdew V, Taylor-Parker J, Tapan U, Tohme YH, Malinkovich Y, Tran B, Gibbs P, Salgia R, White FM, Parvin J, Bharti A. Effect of DNA-PK dependent phosphorylation of topo-I-S10 on its rate of proteasomal degradation and CPT response. Journal of Clinical Oncology. 33: 606-606. DOI: 10.1200/Jco.2015.33.3_Suppl.606 |
0.338 |
|
| 2015 |
Sarma K, Cifuentes-Rojas C, Ergun A, Del Rosario A, Jeon Y, White F, Sadreyev R, Lee JT. ATRX directs binding of PRC2 to Xist RNA and polycomb targets Cell. 160: 568-569. DOI: 10.1016/j.cell.2015.01.030 |
0.528 |
|
| 2014 |
Sarma K, Cifuentes-Rojas C, Ergun A, Del Rosario A, Jeon Y, White F, Sadreyev R, Lee JT. ATRX Directs Binding of PRC2 to Xist RNA and Polycomb Targets. Cell. 159: 1228. PMID 28898627 DOI: 10.1016/j.cell.2014.11.010 |
0.528 |
|
| 2014 |
Sarma K, Cifuentes-Rojas C, Ergun A, Del Rosario A, Jeon Y, White F, Sadreyev R, Lee JT. ATRX directs binding of PRC2 to Xist RNA and Polycomb targets. Cell. 159: 869-83. PMID 25417162 DOI: 10.1016/J.Cell.2014.10.019 |
0.591 |
|
| 2014 |
Bell EL, Nagamori I, Williams EO, Del Rosario AM, Bryson BD, Watson N, White FM, Sassone-Corsi P, Guarente L. SirT1 is required in the male germ cell for differentiation and fecundity in mice. Development (Cambridge, England). 141: 3495-504. PMID 25142464 DOI: 10.1242/Dev.110627 |
0.596 |
|
| 2014 |
Haley J, White FM. Adaptive protein and phosphoprotein networks which promote therapeutic sensitivity or acquired resistance. Biochemical Society Transactions. 42: 758-64. PMID 25109954 DOI: 10.1042/Bst20140038 |
0.324 |
|
| 2014 |
Johnson H, White FM. Quantitative analysis of signaling networks across differentially embedded tumors highlights interpatient heterogeneity in human glioblastoma. Journal of Proteome Research. 13: 4581-93. PMID 24927040 DOI: 10.1021/Pr500418W |
0.543 |
|
| 2014 |
Mertins P, Yang F, Liu T, Mani DR, Petyuk VA, Gillette MA, Clauser KR, Qiao JW, Gritsenko MA, Moore RJ, Levine DA, Townsend R, Erdmann-Gilmore P, Snider JE, Davies SR, ... ... White F, et al. Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels. Molecular & Cellular Proteomics : McP. 13: 1690-704. PMID 24719451 DOI: 10.1074/Mcp.M113.036392 |
0.448 |
|
| 2014 |
Gajadhar AS, White FM. System level dynamics of post-translational modifications. Current Opinion in Biotechnology. 28: 83-7. PMID 24441143 DOI: 10.1016/J.Copbio.2013.12.009 |
0.345 |
|
| 2014 |
Arneja A, Johnson H, Gabrovsek L, Lauffenburger DA, White FM. Qualitatively different T cell phenotypic responses to IL-2 versus IL-15 are unified by identical dependences on receptor signal strength and duration. Journal of Immunology (Baltimore, Md. : 1950). 192: 123-35. PMID 24298013 DOI: 10.4049/Jimmunol.1302291 |
0.478 |
|
| 2013 |
Berchowitz LE, Gajadhar AS, van Werven FJ, De Rosa AA, Samoylova ML, Brar GA, Xu Y, Xiao C, Futcher B, Weissman JS, White FM, Amon A. A developmentally regulated translational control pathway establishes the meiotic chromosome segregation pattern. Genes & Development. 27: 2147-63. PMID 24115771 DOI: 10.1101/Gad.224253.113 |
0.312 |
|
| 2013 |
Floyd SR, Pacold ME, Huang Q, Clarke SM, Lam FC, Cannell IG, Bryson BD, Rameseder J, Lee MJ, Blake EJ, Fydrych A, Ho R, Greenberger BA, Chen GC, Maffa A, ... ... White FM, et al. The bromodomain protein Brd4 insulates chromatin from DNA damage signalling. Nature. 498: 246-50. PMID 23728299 DOI: 10.1038/Nature12147 |
0.592 |
|
| 2013 |
Miraldi ER, Sharfi H, Friedline RH, Johnson H, Zhang T, Lau KS, Ko HJ, Curran TG, Haigis KM, Yaffe MB, Bonneau R, Lauffenburger DA, Kahn BB, Kim JK, Neel BG, ... ... White FM, et al. Molecular network analysis of phosphotyrosine and lipid metabolism in hepatic PTP1b deletion mice. Integrative Biology : Quantitative Biosciences From Nano to Macro. 5: 940-63. PMID 23685806 DOI: 10.1039/C3Ib40013A |
0.502 |
|
| 2013 |
Curran TG, Bryson BD, Reigelhaupt M, Johnson H, White FM. Computer aided manual validation of mass spectrometry-based proteomic data. Methods (San Diego, Calif.). 61: 219-26. PMID 23500044 DOI: 10.1016/J.Ymeth.2013.03.004 |
0.533 |
|
| 2013 |
Johnson H, Lescarbeau RS, Gutierrez JA, White FM. Phosphotyrosine profiling of NSCLC cells in response to EGF and HGF reveals network specific mediators of invasion. Journal of Proteome Research. 12: 1856-67. PMID 23438512 DOI: 10.1021/Pr301192T |
0.559 |
|
| 2012 |
Winter GE, Rix U, Carlson SM, Gleixner KV, Grebien F, Gridling M, Müller AC, Breitwieser FP, Bilban M, Colinge J, Valent P, Bennett KL, White FM, Superti-Furga G. Systems-pharmacology dissection of a drug synergy in imatinib-resistant CML. Nature Chemical Biology. 8: 905-12. PMID 23023260 DOI: 10.1038/Nchembio.1085 |
0.321 |
|
| 2012 |
Johnson H, Del Rosario AM, Bryson BD, Schroeder MA, Sarkaria JN, White FM. Molecular characterization of EGFR and EGFRvIII signaling networks in human glioblastoma tumor xenografts. Molecular & Cellular Proteomics : McP. 11: 1724-40. PMID 22964225 DOI: 10.1074/Mcp.M112.019984 |
0.702 |
|
| 2012 |
Naegle KM, White FM, Lauffenburger DA, Yaffe MB. Robust co-regulation of tyrosine phosphorylation sites on proteins reveals novel protein interactions. Molecular Biosystems. 8: 2771-82. PMID 22851037 DOI: 10.1039/C2Mb25200G |
0.394 |
|
| 2012 |
Bryson BD, White FM. Signaling for death: tyrosine phosphorylation in the response to glucose deprivation. Molecular Systems Biology. 8: 591. PMID 22735337 DOI: 10.1038/Msb.2012.27 |
0.347 |
|
| 2012 |
Johnson H, White FM. Toward quantitative phosphotyrosine profiling in vivo. Seminars in Cell & Developmental Biology. 23: 854-62. PMID 22677333 DOI: 10.1016/J.Semcdb.2012.05.008 |
0.594 |
|
| 2012 |
Carlson SM, White FM. Labeling and identification of direct kinase substrates. Science Signaling. 5: pl3. PMID 22669844 DOI: 10.1126/Scisignal.2002568 |
0.441 |
|
| 2012 |
Jun HJ, Johnson H, Bronson RT, de Feraudy S, White F, Charest A. The oncogenic lung cancer fusion kinase CD74-ROS activates a novel invasiveness pathway through E-Syt1 phosphorylation. Cancer Research. 72: 3764-74. PMID 22659450 DOI: 10.1158/0008-5472.Can-11-3990 |
0.531 |
|
| 2012 |
Carlson SM, White FM. Expanding applications of chemical genetics in signal transduction. Cell Cycle (Georgetown, Tex.). 11: 1903-9. PMID 22544320 DOI: 10.4161/Cc.19956 |
0.337 |
|
| 2012 |
Hackel BJ, Neil JR, White FM, Wittrup KD. Epidermal growth factor receptor downregulation by small heterodimeric binding proteins. Protein Engineering, Design & Selection : Peds. 25: 47-57. PMID 22160867 DOI: 10.1093/Protein/Gzr056 |
0.306 |
|
| 2012 |
Jun HJ, Acquaviva J, Chi D, Lessard J, Zhu H, Woolfenden S, Bronson RT, Pfannl R, White F, Housman DE, Iyer L, Whittaker CA, Boskovitz A, Raval A, Charest A. Acquired MET expression confers resistance to EGFR inhibition in a mouse model of glioblastoma multiforme. Oncogene. 31: 3039-50. PMID 22020333 DOI: 10.1038/Onc.2011.474 |
0.32 |
|
| 2011 |
Carlson SM, Chouinard CR, Labadorf A, Lam CJ, Schmelzle K, Fraenkel E, White FM. Large-scale discovery of ERK2 substrates identifies ERK-mediated transcriptional regulation by ETV3. Science Signaling. 4: rs11. PMID 22028470 DOI: 10.1126/Scisignal.2002010 |
0.37 |
|
| 2011 |
Naegle KM, Welsch RE, Yaffe MB, White FM, Lauffenburger DA. MCAM: multiple clustering analysis methodology for deriving hypotheses and insights from high-throughput proteomic datasets. Plos Computational Biology. 7: e1002119. PMID 21799663 DOI: 10.1371/Journal.Pcbi.1002119 |
0.353 |
|
| 2011 |
White FM. The potential cost of high-throughput proteomics. Science Signaling. 4: pe8. PMID 21325204 DOI: 10.1126/Scisignal.2001813 |
0.323 |
|
| 2011 |
Liu H, Ong SE, Badu-Nkansah K, Schindler J, White FM, Hynes RO. CUB-domain-containing protein 1 (CDCP1) activates Src to promote melanoma metastasis. Proceedings of the National Academy of Sciences of the United States of America. 108: 1379-84. PMID 21220330 DOI: 10.1073/Pnas.1017228108 |
0.359 |
|
| 2011 |
Carlson SM, White FM. Using small molecules and chemical genetics to interrogate signaling networks. Acs Chemical Biology. 6: 75-85. PMID 21077690 DOI: 10.1021/Cb1002834 |
0.324 |
|
| 2010 |
Lahesmaa-Korpinen AM, Carlson SM, White FM, Hautaniemi S. Integrated data management and validation platform for phosphorylated tandem mass spectrometry data. Proteomics. 10: 3515-24. PMID 20827731 DOI: 10.1002/Pmic.200900727 |
0.348 |
|
| 2010 |
Pines G, Huang PH, Zwang Y, White FM, Yarden Y. EGFRvIV: a previously uncharacterized oncogenic mutant reveals a kinase autoinhibitory mechanism. Oncogene. 29: 5850-60. PMID 20676128 DOI: 10.1038/Onc.2010.313 |
0.355 |
|
| 2010 |
Naegle KM, Gymrek M, Joughin BA, Wagner JP, Welsch RE, Yaffe MB, Lauffenburger DA, White FM. PTMScout, a Web resource for analysis of high throughput post-translational proteomics studies. Molecular & Cellular Proteomics : McP. 9: 2558-70. PMID 20631208 DOI: 10.1074/Mcp.M110.001206 |
0.357 |
|
| 2010 |
Huang PH, Miraldi ER, Xu AM, Kundukulam VA, Del Rosario AM, Flynn RA, Cavenee WK, Furnari FB, White FM. Phosphotyrosine signaling analysis of site-specific mutations on EGFRvIII identifies determinants governing glioblastoma cell growth. Molecular Biosystems. 6: 1227-37. PMID 20461251 DOI: 10.1039/C001196G |
0.654 |
|
| 2010 |
Iwai LK, Benoist C, Mathis D, White FM. Quantitative phosphoproteomic analysis of T cell receptor signaling in diabetes prone and resistant mice. Journal of Proteome Research. 9: 3135-45. PMID 20438120 DOI: 10.1021/Pr100035B |
0.343 |
|
| 2010 |
Del Rosario AM, White FM. Quantifying oncogenic phosphotyrosine signaling networks through systems biology. Current Opinion in Genetics & Development. 20: 23-30. PMID 20074929 DOI: 10.1016/J.Gde.2009.12.005 |
0.651 |
|
| 2009 |
Huang PH, Xu AM, White FM. Oncogenic EGFR signaling networks in glioma. Science Signaling. 2: re6. PMID 19738203 DOI: 10.1126/Scisignal.287Re6 |
0.303 |
|
| 2009 |
Morel C, Carlson SM, White FM, Davis RJ. Mcl-1 integrates the opposing actions of signaling pathways that mediate survival and apoptosis. Molecular and Cellular Biology. 29: 3845-52. PMID 19433446 DOI: 10.1128/Mcb.00279-09 |
0.365 |
|
| 2009 |
Nichols AM, White FM. Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra. Methods in Molecular Biology (Clifton, N.J.). 492: 143-60. PMID 19241031 DOI: 10.1007/978-1-59745-493-3_8 |
0.436 |
|
| 2009 |
Joughin BA, Naegle KM, Huang PH, Yaffe MB, Lauffenburger DA, White FM. An integrated comparative phosphoproteomic and bioinformatic approach reveals a novel class of MPM-2 motifs upregulated in EGFRvIII-expressing glioblastoma cells. Molecular Biosystems. 5: 59-67. PMID 19081932 DOI: 10.1039/B815075C |
0.397 |
|
| 2008 |
Nita-Lazar A, Saito-Benz H, White FM. Quantitative phosphoproteomics by mass spectrometry: past, present, and future. Proteomics. 8: 4433-43. PMID 18846511 DOI: 10.1002/Pmic.200800231 |
0.394 |
|
| 2008 |
Tedford NC, White FM, Radding JA. Illuminating signaling network functional biology through quantitative phosphoproteomic mass spectrometry. Briefings in Functional Genomics & Proteomics. 7: 383-94. PMID 18836207 DOI: 10.1093/Bfgp/Eln037 |
0.38 |
|
| 2008 |
White FM. Quantitative phosphoproteomic analysis of signaling network dynamics. Current Opinion in Biotechnology. 19: 404-9. PMID 18619541 DOI: 10.1016/J.Copbio.2008.06.006 |
0.38 |
|
| 2007 |
Huang PH, Cavenee WK, Furnari FB, White FM. Uncovering therapeutic targets for glioblastoma: a systems biology approach. Cell Cycle (Georgetown, Tex.). 6: 2750-4. PMID 17986864 DOI: 10.4161/Cc.6.22.4922 |
0.366 |
|
| 2007 |
White FM. On the iTRAQ of kinase inhibitors. Nature Biotechnology. 25: 994-6. PMID 17846628 DOI: 10.1038/Nbt0907-994 |
0.348 |
|
| 2007 |
Huang PH, Mukasa A, Bonavia R, Flynn RA, Brewer ZE, Cavenee WK, Furnari FB, White FM. Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma. Proceedings of the National Academy of Sciences of the United States of America. 104: 12867-72. PMID 17646646 DOI: 10.1073/Pnas.0705158104 |
0.386 |
|
| 2007 |
Zhang Y, Wolf-Yadlin A, White FM. Quantitative proteomic analysis of phosphotyrosine-mediated cellular signaling networks. Methods in Molecular Biology (Clifton, N.J.). 359: 203-12. PMID 17484120 DOI: 10.1007/978-1-59745-255-7_14 |
0.466 |
|
| 2007 |
Wolf-Yadlin A, Hautaniemi S, Lauffenburger DA, White FM. Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks. Proceedings of the National Academy of Sciences of the United States of America. 104: 5860-5. PMID 17389395 DOI: 10.1073/Pnas.0608638104 |
0.403 |
|
| 2007 |
Wilker EW, van Vugt MA, Artim SA, Huang PH, Petersen CP, Reinhardt HC, Feng Y, Sharp PA, Sonenberg N, White FM, Yaffe MB. 14-3-3sigma controls mitotic translation to facilitate cytokinesis. Nature. 446: 329-32. PMID 17361185 DOI: 10.1038/Nature05584 |
0.368 |
|
| 2007 |
Yaffe MB, White FM. Signaling netwErks get the global treatment. Genome Biology. 8: 202. PMID 17274840 DOI: 10.1186/Gb-2007-8-1-202 |
0.33 |
|
| 2007 |
Kumar N, Wolf-Yadlin A, White FM, Lauffenburger DA. Modeling HER2 effects on cell behavior from mass spectrometry phosphotyrosine data. Plos Computational Biology. 3: e4. PMID 17206861 DOI: 10.1371/Journal.Pcbi.0030004 |
0.403 |
|
| 2006 |
Wolf-Yadlin A, Kumar N, Zhang Y, Hautaniemi S, Zaman M, Kim HD, Grantcharova V, Lauffenburger DA, White FM. Effects of HER2 overexpression on cell signaling networks governing proliferation and migration. Molecular Systems Biology. 2: 54. PMID 17016520 DOI: 10.1038/Msb4100094 |
0.37 |
|
| 2006 |
Schmelzle K, Kane S, Gridley S, Lienhard GE, White FM. Temporal dynamics of tyrosine phosphorylation in insulin signaling. Diabetes. 55: 2171-9. PMID 16873679 DOI: 10.2337/Db06-0148 |
0.308 |
|
| 2006 |
Schmelzle K, White FM. Phosphoproteomic approaches to elucidate cellular signaling networks. Current Opinion in Biotechnology. 17: 406-14. PMID 16806894 DOI: 10.1016/J.Copbio.2006.06.004 |
0.421 |
|
| 2006 |
Kim JE, White FM. Quantitative analysis of phosphotyrosine signaling networks triggered by CD3 and CD28 costimulation in Jurkat cells. Journal of Immunology (Baltimore, Md. : 1950). 176: 2833-43. PMID 16493040 DOI: 10.4049/Jimmunol.176.5.2833 |
0.318 |
|
| 2006 |
Moser K, White FM. Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS. Journal of Proteome Research. 5: 98-104. PMID 16396499 DOI: 10.1021/Pr0503073 |
0.398 |
|
| 2005 |
Behr JR, Matsumoto Y, White FM, Sasisekharan R. Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 19: 2553-62. PMID 16124039 DOI: 10.1002/Rcm.2079 |
0.322 |
|
| 2005 |
Kim JE, Tannenbaum SR, White FM. Global phosphoproteome of HT-29 human colon adenocarcinoma cells. Journal of Proteome Research. 4: 1339-46. PMID 16083285 DOI: 10.1021/Pr050048H |
0.449 |
|
| 2005 |
Zhang Y, Wolf-Yadlin A, Ross PL, Pappin DJ, Rush J, Lauffenburger DA, White FM. Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. Molecular & Cellular Proteomics : McP. 4: 1240-50. PMID 15951569 DOI: 10.1074/Mcp.M500089-Mcp200 |
0.464 |
|
| 2004 |
Chen WG, White FM. Proteomic analysis of cellular signaling. Expert Review of Proteomics. 1: 343-54. PMID 15966830 DOI: 10.1586/14789450.1.3.343 |
0.382 |
|
| 2003 |
Zarling AL, Luckey CJ, Marto JA, White FM, Brame CJ, Evans AM, Lehner PJ, Cresswell P, Shabanowitz J, Hunt DF, Engelhard VH. Tapasin is a facilitator, not an editor, of class I MHC peptide binding. Journal of Immunology (Baltimore, Md. : 1950). 171: 5287-95. PMID 14607930 DOI: 10.4049/Jimmunol.171.10.5287 |
0.764 |
|
| 2003 |
Saibil SD, Ohteki T, White FM, Luscher M, Zakarian A, Elford A, Shabanowitz J, Nishina H, Hugo P, Penninger J, Barber B, Hunt DF, Ohashi PS. Weak agonist self-peptides promote selection and tuning of virus-specific T cells. European Journal of Immunology. 33: 685-96. PMID 12616489 DOI: 10.1002/Eji.200323143 |
0.552 |
|
| 2003 |
Ficarro S, Chertihin O, Westbrook VA, White F, Jayes F, Kalab P, Marto JA, Shabanowitz J, Herr JC, Hunt DF, Visconti PE. Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation. The Journal of Biological Chemistry. 278: 11579-89. PMID 12509440 DOI: 10.1074/Jbc.M202325200 |
0.778 |
|
| 2002 |
Lippolis JD, White FM, Marto JA, Luckey CJ, Bullock TN, Shabanowitz J, Hunt DF, Engelhard VH. Analysis of MHC class II antigen processing by quantitation of peptides that constitute nested sets. Journal of Immunology (Baltimore, Md. : 1950). 169: 5089-97. PMID 12391225 DOI: 10.4049/Jimmunol.169.9.5089 |
0.723 |
|
| 2002 |
Gioeli D, Ficarro SB, Kwiek JJ, Aaronson D, Hancock M, Catling AD, White FM, Christian RE, Settlage RE, Shabanowitz J, Hunt DF, Weber MJ. Androgen receptor phosphorylation. Regulation and identification of the phosphorylation sites. The Journal of Biological Chemistry. 277: 29304-14. PMID 12015328 DOI: 10.1074/Jbc.M204131200 |
0.751 |
|
| 2002 |
Flyer DC, Ramakrishna V, Miller C, Myers H, McDaniel M, Root K, Flournoy C, Engelhard VH, Canaday DH, Marto JA, Ross MM, Hunt DF, Shabanowitz J, White FM. Identification by mass spectrometry of CD8(+)-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product. Infection and Immunity. 70: 2926-32. PMID 12010981 DOI: 10.1128/Iai.70.6.2926-2932.2002 |
0.712 |
|
| 2002 |
Ficarro SB, McCleland ML, Stukenberg PT, Burke DJ, Ross MM, Shabanowitz J, Hunt DF, White FM. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nature Biotechnology. 20: 301-5. PMID 11875433 DOI: 10.1038/Nbt0302-301 |
0.765 |
|
| 2002 |
Caldwell JA, Orsi C, Root KE, Dharsee M, Wang Z, Stewart II, White FM, Brame CJ, Guha A, Micaleff J, Ornatsky O, Marto JA. Comprehensive comparative proteome analysis Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 57-58. |
0.655 |
|
| 2002 |
Larsen B, White F, Chen J, Ornatsky O, Marto J, Caldwell J, Orsi C, Dahzee M, Wang Z, Figeys D. Phosphorylation analysis (phosmap) of complex protein mixtures Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 165-166. |
0.683 |
|
| 2001 |
Luckey CJ, Marto JA, Partridge M, Hall E, White FM, Lippolis JD, Shabanowitz J, Hunt DF, Engelhard VH. Differences in the expression of human class I MHC alleles and their associated peptides in the presence of proteasome inhibitors. Journal of Immunology (Baltimore, Md. : 1950). 167: 1212-21. PMID 11466336 DOI: 10.4049/Jimmunol.167.3.1212 |
0.728 |
|
| 2001 |
Nepom GT, Lippolis JD, White FM, Masewicz S, Marto JA, Herman A, Luckey CJ, Falk B, Shabanowitz J, Hunt DF, Engelhard VH, Nepom BS. Identification and modulation of a naturally processed T cell epitope from the diabetes-associated autoantigen human glutamic acid decarboxylase 65 (hGAD65). Proceedings of the National Academy of Sciences of the United States of America. 98: 1763-8. PMID 11172025 DOI: 10.1073/Pnas.98.4.1763 |
0.705 |
|
| 2000 |
Zarling AL, Ficarro SB, White FM, Shabanowitz J, Hunt DF, Engelhard VH. Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo. The Journal of Experimental Medicine. 192: 1755-62. PMID 11120772 DOI: 10.1084/Jem.192.12.1755 |
0.75 |
|
| 2000 |
Gimenez-Bonafé P, Laszczak M, Kasinsky HE, Lemke MJ, Lewis JD, Iskandar M, He T, Ikonomou MG, White FM, Hunt DF, Chiva M, Ausió J. Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish. Molecular Reproduction and Development. 57: 185-93. PMID 10984419 DOI: 10.1002/1098-2795(200010)57:2<185::Aid-Mrd10>3.0.Co;2-5 |
0.492 |
|
| 2000 |
Huberman A, Aguilar MB, Navarro-Quiroga I, Ramos L, Fernandez I, White FM, Hunt DF. Corrigendum to 'A hyperglycemic peptide hormone from the caribbean shrimp penaeus (litopenaeus) schmitti'*(1) Peptides. 21: 753. PMID 10876060 DOI: 10.1016/S0196-9781(00)00223-0 |
0.524 |
|
| 2000 |
Crotzer VL, Christian RE, Brooks JM, Shabanowitz J, Settlage RE, Marto JA, White FM, Rickinson AB, Hunt DF, Engelhard VH. Immunodominance among EBV-derived epitopes restricted by HLA-B27 does not correlate with epitope abundance in EBV-transformed B-lymphoblastoid cell lines. Journal of Immunology (Baltimore, Md. : 1950). 164: 6120-9. PMID 10843661 DOI: 10.4049/Jimmunol.164.12.6120 |
0.711 |
|
| 2000 |
Huberman A, Aguilar MB, Navarro-Quiroga I, Ramos L, Fernández I, White FM, Hunt DF, Shabanowitz J. A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti. Peptides. 21: 331-8. PMID 10793213 DOI: 10.1016/S0196-9781(00)00155-8 |
0.527 |
|
| 1999 |
Pierce RA, Field ED, den Haan JM, Caldwell JA, White FM, Marto JA, Wang W, Frost LM, Blokland E, Reinhardus C, Shabanowitz J, Hunt DF, Goulmy E, Engelhard VH. Cutting edge: the HLA-A*0101-restricted HY minor histocompatibility antigen originates from DFFRY and contains a cysteinylated cysteine residue as identified by a novel mass spectrometric technique. Journal of Immunology (Baltimore, Md. : 1950). 163: 6360-4. PMID 10586024 |
0.766 |
|
| 1998 |
Emmett MR, White FM, Hendrickson CL, Shi SD, Marshall AG. Application of micro-electrospray liquid chromatography techniques to FT-ICR MS to enable high-sensitivity biological analysis. Journal of the American Society For Mass Spectrometry. 9: 333-40. PMID 9879363 DOI: 10.1016/S1044-0305(97)00287-0 |
0.302 |
|
| 1996 |
White FM, Marto JA, Marshall AG. An external source 7 T Fourier transform ion cyclotron resonance mass spectrometer with electrostatic ion guide. Rapid Communications in Mass Spectrometry : Rcm. 10: 1845-9. PMID 8953787 DOI: 10.1002/(Sici)1097-0231(199611)10:14<1845::Aid-Rcm749>3.0.Co;2-# |
0.506 |
|
| 1996 |
Senko MW, Hendrickson CL, Pasa-Tolić L, Marto JA, White FM, Guan S, Marshall AG. Electrospray ionization Fourier transform ion cyclotron resonance at 9.4 T. Rapid Communications in Mass Spectrometry : Rcm. 10: 1824-8. PMID 8953784 DOI: 10.1002/(Sici)1097-0231(199611)10:14<1824::Aid-Rcm695>3.0.Co;2-E |
0.516 |
|
| 1995 |
Solouki T, Marto JA, White FM, Guan S, Marshall AG. Attomole biomolecule mass analysis by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance. Analytical Chemistry. 67: 4139-44. PMID 8633766 DOI: 10.1021/Ac00118A017 |
0.535 |
|
| 1995 |
Marto JA, White FM, Seldomridge S, Marshall AG. Structural characterization of phospholipids by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry. Analytical Chemistry. 67: 3979-84. PMID 8633761 DOI: 10.1021/Ac00117A025 |
0.512 |
|
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