Year |
Citation |
Score |
2024 |
Marlétaz F, Timoshevskaya N, Timoshevskiy VA, Parey E, Simakov O, Gavriouchkina D, Suzuki M, Kubokawa K, Brenner S, Smith JJ, Rokhsar DS. The hagfish genome and the evolution of vertebrates. Nature. PMID 38262590 DOI: 10.1038/s41586-024-07070-3 |
0.835 |
|
2023 |
Piovani L, Marlétaz F. Single-cell transcriptomics refuels the exploration of spiralian biology. Briefings in Functional Genomics. PMID 37609674 DOI: 10.1093/bfgp/elad038 |
0.773 |
|
2023 |
Piovani L, Leite DJ, Yañez Guerra LA, Simpson F, Musser JM, Salvador-Martínez I, Marlétaz F, Jékely G, Telford MJ. Single-cell atlases of two lophotrochozoan larvae highlight their complex evolutionary histories. Science Advances. 9: eadg6034. PMID 37531419 DOI: 10.1126/sciadv.adg6034 |
0.759 |
|
2023 |
Ahuja N, Hwaun E, Pungor JR, Rafiq R, Nemes S, Sakmar T, Vogt MA, Grasse B, Diaz Quiroz J, Montague TG, Null RW, Dallis DN, Gavriouchkina D, Marletaz F, Abbo L, et al. Creation of an albino squid line by CRISPR-Cas9 and its application for in vivo functional imaging of neural activity. Current Biology : Cb. PMID 37343558 DOI: 10.1016/j.cub.2023.05.066 |
0.804 |
|
2023 |
Marlétaz F, Timoshevskaya N, Timoshevskiy V, Simakov O, Parey E, Gavriouchkina D, Suzuki M, Kubokawa K, Brenner S, Smith J, Rokhsar DS. The hagfish genome and the evolution of vertebrates. Biorxiv : the Preprint Server For Biology. PMID 37131617 DOI: 10.1101/2023.04.17.537254 |
0.841 |
|
2023 |
Marlétaz F, Couloux A, Poulain J, Labadie K, Da Silva C, Mangenot S, Noel B, Poustka AJ, Dru P, Pegueroles C, Borra M, Lowe EK, Lhomond G, Besnardeau L, Le Gras S, et al. Analysis of the sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes. Cell Genomics. 3: 100295. PMID 37082140 DOI: 10.1016/j.xgen.2023.100295 |
0.825 |
|
2023 |
Marlétaz F, de la Calle-Mustienes E, Acemel RD, Paliou C, Naranjo S, Martínez-García PM, Cases I, Sleight VA, Hirschberger C, Marcet-Houben M, Navon D, Andrescavage A, Skvortsova K, Duckett PE, González-Rajal Á, et al. The little skate genome and the evolutionary emergence of wing-like fins. Nature. PMID 37046085 DOI: 10.1038/s41586-023-05868-1 |
0.72 |
|
2023 |
Martín-Zamora FM, Liang Y, Guynes K, Carrillo-Baltodano AM, Davies BE, Donnellan RD, Tan Y, Moggioli G, Seudre O, Tran M, Mortimer K, Luscombe NM, Hejnol A, Marlétaz F, Martín-Durán JM. Annelid functional genomics reveal the origins of bilaterian life cycles. Nature. PMID 36697830 DOI: 10.1038/s41586-022-05636-7 |
0.454 |
|
2022 |
Pisani D, Rossi ME, Marlétaz F, Feuda R. Phylogenomics: Is less more when using large-scale datasets? Current Biology : Cb. 32: R1340-R1342. PMID 36538883 DOI: 10.1016/j.cub.2022.11.019 |
0.745 |
|
2022 |
Brasó-Vives M, Marlétaz F, Echchiki A, Mantica F, Acemel RD, Gómez-Skarmeta JL, Hartasánchez DA, Le Targa L, Pontarotti P, Tena JJ, Maeso I, Escriva H, Irimia M, Robinson-Rechavi M. Parallel evolution of amphioxus and vertebrate small-scale gene duplications. Genome Biology. 23: 243. PMID 36401278 DOI: 10.1186/s13059-022-02808-6 |
0.599 |
|
2022 |
Gavriouchkina D, Marlétaz F, Miryeganeh M, Saze H. Corrigendum. The New Phytologist. PMID 35383924 DOI: 10.1111/nph.18106 |
0.722 |
|
2022 |
Simakov O, Bredeson J, Berkoff K, Marletaz F, Mitros T, Schultz DT, O'Connell BL, Dear P, Martinez DE, Steele RE, Green RE, David CN, Rokhsar DS. Deeply conserved synteny and the evolution of metazoan chromosomes. Science Advances. 8: eabi5884. PMID 35108053 DOI: 10.1126/sciadv.abi5884 |
0.619 |
|
2021 |
Miryeganeh M, Marlétaz F, Gavriouchkina D, Saze H. De novo genome assembly and in natura epigenomics reveal salinity-induced DNA methylation in the mangrove tree Bruguiera gymnorhiza. The New Phytologist. PMID 34532854 DOI: 10.1111/nph.17738 |
0.811 |
|
2021 |
Finet C, Kassner VA, Carvalho AB, Chung H, Day JP, Day S, Delaney EK, De Ré FC, Dufour HD, Dupim E, Izumitani HF, Gautério TB, Justen J, Katoh T, Kopp A, et al. DrosoPhyla: resources for Drosophilid Phylogeny and Systematics. Genome Biology and Evolution. PMID 34343293 DOI: 10.1093/gbe/evab179 |
0.439 |
|
2021 |
Sanchez G, Fernández-Álvarez FÁ, Taite M, Sugimoto C, Jolly J, Simakov O, Marlétaz F, Allcock L, Rokhsar DS. Phylogenomics illuminates the evolution of bobtail and bottletail squid (order Sepiolida). Communications Biology. 4: 819. PMID 34188187 DOI: 10.1038/s42003-021-02348-y |
0.656 |
|
2021 |
Xu F, Marlétaz F, Gavriouchkina D, Liu X, Sauka-Spengler T, Zhang G, Holland PWH. Evidence from oyster suggests an ancient role for Pdx in regulating insulin gene expression in animals. Nature Communications. 12: 3117. PMID 34035261 DOI: 10.1038/s41467-021-23216-7 |
0.779 |
|
2020 |
Martín-Durán JM, Vellutini BC, Marlétaz F, Cetrangolo V, Cvetesic N, Thiel D, Henriet S, Grau-Bové X, Carrillo-Baltodano AM, Gu W, Kerbl A, Marquez Y, Bekkouche N, Chourrout D, Gómez-Skarmeta JL, et al. Conservative route to genome compaction in a miniature annelid. Nature Ecology & Evolution. PMID 33199869 DOI: 10.1038/s41559-020-01327-6 |
0.541 |
|
2020 |
Almudi I, Vizueta J, Wyatt CDR, de Mendoza A, Marlétaz F, Firbas PN, Feuda R, Masiero G, Medina P, Alcaina-Caro A, Cruz F, Gómez-Garrido J, Gut M, Alioto TS, Vargas-Chavez C, et al. Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings. Nature Communications. 11: 2631. PMID 32457347 DOI: 10.1038/S41467-020-16284-8 |
0.821 |
|
2020 |
Simakov O, Marlétaz F, Yue JX, O'Connell B, Jenkins J, Brandt A, Calef R, Tung CH, Huang TK, Schmutz J, Satoh N, Yu JK, Putnam NH, Green RE, Rokhsar DS. Deeply conserved synteny resolves early events in vertebrate evolution. Nature Ecology & Evolution. PMID 32313176 DOI: 10.1038/S41559-020-1156-Z |
0.797 |
|
2020 |
Choo LQ, Bal TMP, Choquet M, Smolina I, Ramos-Silva P, Marlétaz F, Kopp M, Hoarau G, Peijnenburg KTCA. Novel genomic resources for shelled pteropods: a draft genome and target capture probes for Limacina bulimoides, tested for cross-species relevance. Bmc Genomics. 21: 11. PMID 31900119 DOI: 10.1186/S12864-019-6372-Z |
0.471 |
|
2020 |
Martín-Durán JM, Marlétaz F. Unravelling spiral cleavage. Development (Cambridge, England). 147. PMID 31898583 DOI: 10.1242/Dev.181081 |
0.402 |
|
2019 |
Sanchez G, Jolly J, Reid A, Sugimoto C, Azama C, Marlétaz F, Simakov O, Rokhsar DS. New bobtail squid (Sepiolidae: Sepiolinae) from the Ryukyu islands revealed by molecular and morphological analysis. Communications Biology. 2: 465. PMID 31840110 DOI: 10.1038/s42003-019-0661-6 |
0.538 |
|
2019 |
Marlétaz F. Zoology: Worming into the Origin of Bilaterians. Current Biology : Cb. 29: R577-R579. PMID 31211978 DOI: 10.1016/J.Cub.2019.05.006 |
0.333 |
|
2019 |
Marlétaz F, Peijnenburg KTCA, Goto T, Satoh N, Rokhsar DS. A New Spiralian Phylogeny Places the Enigmatic Arrow Worms among Gnathiferans. Current Biology : Cb. 29: 312-318.e3. PMID 30639106 DOI: 10.1016/J.Cub.2018.11.042 |
0.626 |
|
2018 |
Marlétaz F, Firbas PN, Maeso I, Tena JJ, Bogdanovic O, Perry M, Wyatt CDR, de la Calle-Mustienes E, Bertrand S, Burguera D, Acemel RD, van Heeringen SJ, Naranjo S, Herrera-Ubeda C, Skvortsova K, et al. Amphioxus functional genomics and the origins of vertebrate gene regulation. Nature. PMID 30464347 DOI: 10.1038/S41586-018-0734-6 |
0.759 |
|
2017 |
Marlétaz F, Le Parco Y, Liu S, Peijnenburg KTCA. Extreme Mitogenomic Variation in Natural Populations of Chaetognaths. Genome Biology and Evolution. 9: 1374-1384. PMID 28854623 DOI: 10.1093/Gbe/Evx090 |
0.347 |
|
2017 |
Hargreaves AD, Zhou L, Christensen J, Marlétaz F, Liu S, Li F, Jansen PG, Spiga E, Hansen MT, Pedersen SVH, Biswas S, Serikawa K, Fox BA, Taylor WR, Mulley JF, et al. Genome sequence of a diabetes-prone rodent reveals a mutation hotspot around the ParaHox gene cluster. Proceedings of the National Academy of Sciences of the United States of America. PMID 28674003 DOI: 10.1073/Pnas.1702930114 |
0.758 |
|
2017 |
Burridge AK, Hörnlein C, Janssen AW, Hughes M, Bush SL, Marlétaz F, Gasca R, Pierrot-Bults AC, Michel E, Todd JA, Young JR, Osborn KJ, Menken SBJ, Peijnenburg KTCA. Time-calibrated molecular phylogeny of pteropods. Plos One. 12: e0177325. PMID 28604805 DOI: 10.1371/Journal.Pone.0177325 |
0.381 |
|
2017 |
Holland PW, Marlétaz F, Maeso I, Dunwell TL, Paps J. New genes from old: asymmetric divergence of gene duplicates and the evolution of development. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 27994121 DOI: 10.1098/Rstb.2015.0480 |
0.821 |
|
2016 |
Maeso I, Dunwell TL, Wyatt CD, Marlétaz F, Vető B, Bernal JA, Quah S, Irimia M, Holland PW. Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals. Bmc Biology. 14: 45. PMID 27296695 DOI: 10.1186/S12915-016-0267-0 |
0.722 |
|
2016 |
Feuda R, Marletaz F, Bentley MA, Holland PW. Conservation, duplication and divergence of five opsin genes in insect evolution. Genome Biology and Evolution. PMID 26865071 DOI: 10.1093/Gbe/Evw015 |
0.788 |
|
2016 |
Acemel RD, Tena JJ, Irastorza-Azcarate I, Marlétaz F, Gómez-Marín C, de la Calle-Mustienes E, Bertrand S, Diaz SG, Aldea D, Aury JM, Mangenot S, Holland PW, Devos DP, Maeso I, Escrivá H, et al. A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation. Nature Genetics. PMID 26829752 DOI: 10.1038/Ng.3497 |
0.623 |
|
2015 |
Simakov O, Kawashima T, Marlétaz F, Jenkins J, Koyanagi R, Mitros T, Hisata K, Bredeson J, Shoguchi E, Gyoja F, Yue JX, Chen YC, Freeman RM, Sasaki A, Hikosaka-Katayama T, et al. Hemichordate genomes and deuterostome origins. Nature. PMID 26580012 DOI: 10.1038/Nature16150 |
0.83 |
|
2015 |
Kenny NJ, Namigai EK, Marlétaz F, Hui JH, Shimeld SM. Draft genome assemblies and predicted microRNA complements of the intertidal lophotrochozoans Patella vulgata (Mollusca, Patellogastropoda) and Spirobranchus (Pomatoceros) lamarcki (Annelida, Serpulida). Marine Genomics. PMID 26319627 DOI: 10.1016/J.Margen.2015.07.004 |
0.348 |
|
2015 |
Marlétaz F, Maeso I, Faas L, Isaacs HV, Holland PW. Cdx ParaHox genes acquired distinct developmental roles after gene duplication in vertebrate evolution. Bmc Biology. 13: 56. PMID 26231746 DOI: 10.1186/S12915-015-0165-X |
0.73 |
|
2014 |
Ferguson L, Marlétaz F, Carter JM, Taylor WR, Gibbs M, Breuker CJ, Holland PW. Ancient expansion of the hox cluster in lepidoptera generated four homeobox genes implicated in extra-embryonic tissue formation. Plos Genetics. 10: e1004698. PMID 25340822 DOI: 10.1371/Journal.Pgen.1004698 |
0.711 |
|
2014 |
Marlétaz F, Paps J, Maeso I, Holland PW. Discovery and classification of homeobox genes in animal genomes. Methods in Molecular Biology (Clifton, N.J.). 1196: 3-18. PMID 25151154 DOI: 10.1007/978-1-4939-1242-1_1 |
0.815 |
|
2013 |
Simakov O, Marletaz F, Cho SJ, Edsinger-Gonzales E, Havlak P, Hellsten U, Kuo DH, Larsson T, Lv J, Arendt D, Savage R, Osoegawa K, de Jong P, Grimwood J, Chapman JA, et al. Insights into bilaterian evolution from three spiralian genomes. Nature. 493: 526-31. PMID 23254933 DOI: 10.1038/Nature11696 |
0.839 |
|
2013 |
Finet C, Berne-Dedieu A, Scutt CP, Marlétaz F. Evolution of the ARF gene family in land plants: old domains, new tricks. Molecular Biology and Evolution. 30: 45-56. PMID 22977118 DOI: 10.1093/Molbev/Mss220 |
0.415 |
|
2010 |
Finet C, Timme RE, Delwiche CF, Marlétaz F. Multigene phylogeny of the green lineage reveals the origin and diversification of land plants. Current Biology : Cb. 20: 2217-22. PMID 21145743 DOI: 10.1016/J.Cub.2010.11.035 |
0.341 |
|
2010 |
Marlétaz F, Gyapay G, Le Parco Y. High level of structural polymorphism driven by mobile elements in the Hox genomic region of the Chaetognath Spadella cephaloptera. Genome Biology and Evolution. 2: 665-77. PMID 20829282 DOI: 10.1093/Gbe/Evq047 |
0.441 |
|
2008 |
Campo-Paysaa F, Marlétaz F, Laudet V, Schubert M. Retinoic acid signaling in development: tissue-specific functions and evolutionary origins. Genesis (New York, N.Y. : 2000). 46: 640-56. PMID 19003929 DOI: 10.1002/Dvg.20444 |
0.361 |
|
2008 |
Marlétaz F, Le Parco Y. Careful with understudied phyla: the case of chaetognath. Bmc Evolutionary Biology. 8: 251. PMID 18798978 DOI: 10.1186/1471-2148-8-251 |
0.444 |
|
2008 |
Marlétaz F, Gilles A, Caubit X, Perez Y, Dossat C, Samain S, Gyapay G, Wincker P, Le Parco Y. Chaetognath transcriptome reveals ancestral and unique features among bilaterians. Genome Biology. 9: R94. PMID 18533022 DOI: 10.1186/Gb-2008-9-6-R94 |
0.435 |
|
Show low-probability matches. |