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Changjin Hong, Ph.D. - Publications

Affiliations: 
2008 University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Electronics and Electrical Engineering, Computer Science
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang SC, Yeu Y, Hammer STG, Xiao S, Zhu M, Hong C, Clemenceau JR, Yoon LY, Nassour I, Shen J, Agarwal D, Reznik SI, Mansour JC, Yopp AC, Zhu H, et al. Hispanic/Latino gastric adenocarcinoma patients have distinct molecular profiles including a high rate of germline CDH1 mutations. Cancer Research. PMID 32269045 DOI: 10.1158/0008-5472.Can-19-2918  0.313
2015 Whipple JM, Youssef OA, Aruscavage PJ, Nix DA, Hong C, Johnson WE, Bass BL. Genome-wide profiling of the C. elegans dsRNAome. Rna (New York, N.Y.). 21: 786-800. PMID 25805852 DOI: 10.1261/Rna.048801.114  0.33
2015 Hong C, Wang J, Xing C, Hwang TH, Park JY. Intersection of DNA Privacy and Whole-Genome Sequencing. Clinical Chemistry. 61: 900-2. PMID 25655271 DOI: 10.1373/Clinchem.2014.235499  0.407
2014 Hong C, Manimaran S, Johnson WE. PathoQC: Computationally Efficient Read Preprocessing and Quality Control for High-Throughput Sequencing Data Sets. Cancer Informatics. 13: 167-76. PMID 25983538 DOI: 10.4137/Cin.S13890  0.379
2014 Hong C, Manimaran S, Shen Y, Perez-Rogers JF, Byrd AL, Castro-Nallar E, Crandall KA, Johnson WE. PathoScope 2.0: a complete computational framework for strain identification in environmental or clinical sequencing samples. Microbiome. 2: 33. PMID 25225611 DOI: 10.1186/2049-2618-2-33  0.415
2013 Hong C, Clement NL, Clement S, Hammoud SS, Carrell DT, Cairns BR, Snell Q, Clement MJ, Johnson WE. Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data. Bmc Bioinformatics. 14: 337. PMID 24261665 DOI: 10.1186/1471-2105-14-337  0.419
2013 Francis OE, Bendall M, Manimaran S, Hong C, Clement NL, Castro-Nallar E, Snell Q, Schaalje GB, Clement MJ, Crandall KA, Johnson WE. Pathoscope: species identification and strain attribution with unassembled sequencing data. Genome Research. 23: 1721-9. PMID 23843222 DOI: 10.1101/Gr.150151.112  0.392
2012 Cai H, Hong C, Gu J, Lilburn TG, Kuang R, Wang Y. Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum. Bmc Systems Biology. 6: S5. PMID 23282319 DOI: 10.1186/1752-0509-6-S3-S5  0.333
2009 Hong C, Tewfik AH. Heuristic reusable dynamic programming: efficient updates of local sequence alignment. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 6: 570-82. PMID 19875856 DOI: 10.1109/Tcbb.2009.30  0.532
2008 Hong C, Tewfik AH. Efficient Updating of Biological Sequence Analyses Ieee Journal of Selected Topics in Signal Processing. 2: 365-377. DOI: 10.1109/Jstsp.2008.924382  0.529
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