Anitra E. Ingalls, Ph.D. - Publications

2002 Stony Brook University, Stony Brook, NY, United States 

64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Boysen AK, Carlson LT, Durham BP, Groussman RD, Aylward FO, Ribalet F, Heal KR, White AE, DeLong EF, Armbrust EV, Ingalls AE. Particulate Metabolites and Transcripts Reflect Diel Oscillations of Microbial Activity in the Surface Ocean. Msystems. 6. PMID 33947808 DOI: 10.1128/mSystems.00896-20  1
2021 Heal KR, Durham BP, Boysen AK, Carlson LT, Qin W, Ribalet F, White AE, Bundy RM, Armbrust EV, Ingalls AE. Marine Community Metabolomes Carry Fingerprints of Phytoplankton Community Composition. Msystems. 6. PMID 33947800 DOI: 10.1128/mSystems.01334-20  1
2020 Mattes TE, Ingalls AE, Burke S, Morris RM. Metabolic flexibility of SUP05 under low DO growth conditions. Environmental Microbiology. PMID 32893469 DOI: 10.1111/1462-2920.15226  1
2020 Qin W, Zheng Y, Zhao F, Wang Y, Urakawa H, Martens-Habbena W, Liu H, Huang X, Zhang X, Nakagawa T, Mende DR, Bollmann A, Wang B, Zhang Y, Amin SA, ... ... Ingalls AE, et al. Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea. The Isme Journal. PMID 32636492 DOI: 10.1038/S41396-020-0710-7  1
2020 Zhang Y, Qin W, Hou L, Zakem EJ, Wan X, Zhao Z, Liu L, Hunt KA, Jiao N, Kao SJ, Tang K, Xie X, Shen J, Li Y, Chen M, ... ... Ingalls AE, et al. Nitrifier adaptation to low energy flux controls inventory of reduced nitrogen in the dark ocean. Proceedings of the National Academy of Sciences of the United States of America. PMID 32071230 DOI: 10.1073/Pnas.1912367117  1
2020 Steen AD, Kusch S, Abdulla HA, Cakić N, Coffinet S, Dittmar T, Fulton JM, Galy V, Hinrichs K, Ingalls AE, Koch BP, Kujawinski E, Liu Z, Osterholz H, Rush D, et al. Analytical and Computational Advances, Opportunities, and Challenges in Marine Organic Biogeochemistry in an Era of “Omics” Frontiers in Marine Science. 7. DOI: 10.3389/Fmars.2020.00718  1
2019 Lu X, Heal KR, Ingalls AE, Doxey AC, Neufeld JD. Metagenomic and chemical characterization of soil cobalamin production. The Isme Journal. PMID 31492962 DOI: 10.1038/S41396-019-0502-0  1
2019 Wilson ST, Hawco NJ, Armbrust EV, Barone B, Björkman KM, Boysen AK, Burgos M, Burrell TJ, Casey JR, DeLong EF, Dugenne M, Dutkiewicz S, Dyhrman ST, Ferrón S, Follows MJ, ... ... Ingalls AE, et al. Kīlauea lava fuels phytoplankton bloom in the North Pacific Ocean. Science (New York, N.Y.). 365: 1040-1044. PMID 31488692 DOI: 10.1126/Science.Aax4767  1
2019 Wang B, Qin W, Ren Y, Zhou X, Jung MY, Han P, Eloe-Fadrosh EA, Li M, Zheng Y, Lu L, Yan X, Ji J, Liu Y, Liu L, Heiner C, ... ... Ingalls AE, et al. Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons. The Isme Journal. PMID 31462715 DOI: 10.1038/S41396-019-0493-X  1
2019 Durham BP, Boysen AK, Carlson LT, Groussman RD, Heal KR, Cain KR, Morales RL, Coesel SN, Morris RM, Ingalls AE, Armbrust EV. Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean. Nature Microbiology. PMID 31332382 DOI: 10.1038/S41564-019-0507-5  1
2019 Heal KR, Kellogg NA, Carlson LT, Lionheart RM, Ingalls AE. Metabolic Consequences of Cobalamin Scarcity in the Diatom Thalassiosira pseudonana as Revealed Through Metabolomics. Protist. 170: 328-348. PMID 31260945 DOI: 10.1016/J.Protis.2019.05.004  1
2019 Shah V, Zhao X, Lundeen RA, Ingalls AE, Nicastro D, Morris RM. Morphological Plasticity in a Sulfur-Oxidizing Marine Bacterium from the SUP05 Clade Enhances Dark Carbon Fixation. Mbio. 10. PMID 31064824 DOI: 10.1128/Mbio.00216-19  1
2019 Spietz RL, Lundeen RA, Zhao X, Nicastro D, Ingalls AE, Morris RM. Heterotrophic carbon metabolism and energy acquisition in Candidatus Thioglobus singularis strain PS1, a member of the SUP05 clade of marine Gammaproteobacteria. Environmental Microbiology. PMID 30951247 DOI: 10.1111/1462-2920.14623  1
2019 Torstensson A, Young JN, Carlson LT, Ingalls AE, Deming JW. Use of exogenous glycine betaine and its precursor choline as osmoprotectants in Antarctic sea-ice diatoms. Journal of Phycology. PMID 30685888 DOI: 10.1111/Jpy.12839  1
2018 Heal KR, Qin W, Amin SA, Devol AH, Moffett JW, Virginia Armbrust E, Stahl DA, Ingalls AE. Accumulation of NO -cobalamin in nutrient-stressed ammonia-oxidizing archaea and in the oxygen deficient zone of the Eastern Tropical North Pacific. Environmental Microbiology Reports. PMID 30022612 DOI: 10.1111/1758-2229.12664  1
2017 Boysen AK, Heal KR, Carlson LT, Ingalls AE. Best-matched internal standard normalization in liquid chromatography-mass spectrometry metabolomics applied to environmental samples. Analytical Chemistry. PMID 29239170 DOI: 10.1021/Acs.Analchem.7B04400  1
2017 Qin W, Amin SA, Lundeen RA, Heal KR, Martens-Habbena W, Turkarslan S, Urakawa H, Costa KC, Hendrickson EL, Wang T, Beck DA, Tiquia-Arashiro SM, Taub F, Holmes AD, Vajrala N, ... ... Ingalls AE, et al. Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations. The Isme Journal. PMID 29053148 DOI: 10.1038/Ismej.2017.186  1
2017 Qin W, Heal KR, Ramdasi R, Kobelt JN, Martens-Habbena W, Bertagnolli AD, Amin SA, Walker CB, Urakawa H, Könneke M, Devol AH, Moffett JW, Armbrust EV, Jensen GJ, Ingalls AE, et al. Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota. International Journal of Systematic and Evolutionary Microbiology. PMID 29034851 DOI: 10.1099/Ijsem.0.002416  1
2017 Qin W, Meinhardt KA, Moffett JW, Devol AH, Armbrust EV, Ingalls AE, Stahl DA. Influence of Oxygen Availability on the Activities of Ammonia-oxidizing Archaea. Environmental Microbiology Reports. PMID 28211189 DOI: 10.1111/1758-2229.12525  1
2017 Fassbender AJ, Palevsky HI, Martz TR, Ingalls AE, Gledhill M, Fawcett SE, Brandes JA, Aluwihare LI. Perspectives on Chemical Oceanography in the 21st century: Participants of the COME ABOARD Meeting examine aspects of the field in the context of 40 years of DISCO Marine Chemistry. 196: 181-190. DOI: 10.1016/J.Marchem.2017.09.002  0.01
2017 Horak REA, Qin W, Bertagnolli AD, Nelson A, Heal KR, Han H, Heller M, Schauer AJ, Jeffrey WH, Armbrust EV, Moffett JW, Ingalls AE, Stahl DA, Devol AH. Relative impacts of light, temperature, and reactive oxygen on thaumarchaeal ammonia oxidation in the North Pacific Ocean Limnology and Oceanography. 63: 741-757. DOI: 10.1002/Lno.10665  0.01
2016 Heal KR, Qin W, Ribalet F, Bertagnolli AD, Coyote-Maestas W, Hmelo LR, Moffett JW, Devol AH, Armbrust EV, Stahl DA, Ingalls AE. Two distinct pools of B12 analogs reveal community interdependencies in the ocean. Proceedings of the National Academy of Sciences of the United States of America. PMID 28028206 DOI: 10.1073/Pnas.1608462114  1
2016 Ingalls AE. Signal from the subsurface Nature Geoscience. 9: 572-573. DOI: 10.1038/Ngeo2765  0.01
2015 Qin W, Carlson LT, Armbrust EV, Devol AH, Moffett JW, Stahl DA, Ingalls AE. Confounding effects of oxygen and temperature on the TEX86 signature of marine Thaumarchaeota. Proceedings of the National Academy of Sciences of the United States of America. 112: 10979-84. PMID 26283385 DOI: 10.1073/Pnas.1501568112  1
2015 Amin SA, Hmelo LR, van Tol HM, Durham BP, Carlson LT, Heal KR, Morales RL, Berthiaume CT, Parker MS, Djunaedi B, Ingalls AE, Parsek MR, Moran MA, Armbrust EV. Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria. Nature. 522: 98-101. PMID 26017307 DOI: 10.1038/Nature14488  1
2015 French DW, Huguet C, Turich C, Wakeham SG, Carlson LT, Ingalls AE. Spatial distributions of core and intact glycerol dialkyl glycerol tetraethers (GDGTs) in the Columbia River Basin and Willapa Bay, Washington: Insights into origin and implications for the BIT index Organic Geochemistry. 88: 91-112. DOI: 10.1016/J.Orggeochem.2015.09.001  1
2015 Bridoux MC, Neibauer J, Ingalls AE, Nunn BL, Keil RG. Suspended marine particulate proteins in coastal and oligotrophic waters Journal of Marine Systems. 143: 39-48. DOI: 10.1016/J.Jmarsys.2014.10.014  1
2014 Martens-Habbena W, Qin W, Horak RE, Urakawa H, Schauer AJ, Moffett JW, Armbrust EV, Ingalls AE, Devol AH, Stahl DA. The production of nitric oxide by marine ammonia-oxidizing archaea and inhibition of archaeal ammonia oxidation by a nitric oxide scavenger. Environmental Microbiology. PMID 25420929 DOI: 10.1111/1462-2920.12677  1
2014 Heal KR, Carlson LT, Devol AH, Armbrust EV, Moffett JW, Stahl DA, Ingalls AE. Determination of four forms of vitamin B12 and other B vitamins in seawater by liquid chromatography/tandem mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 28: 2398-404. PMID 25303468 DOI: 10.1002/Rcm.7040  1
2014 Qin W, Amin SA, Martens-Habbena W, Walker CB, Urakawa H, Devol AH, Ingalls AE, Moffett JW, Armbrust EV, Stahl DA. Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation. Proceedings of the National Academy of Sciences of the United States of America. 111: 12504-9. PMID 25114236 DOI: 10.1073/Pnas.1324115111  1
2014 Urakawa H, Martens-Habbena W, Huguet C, de la Torre JR, Ingalls AE, Devol AH, Stahl DA. Ammonia availability shapes the seasonal distribution and activity of archaeal and bacterial ammonia oxidizers in the Puget Sound Estuary Limnology and Oceanography. 59: 1321-1335. DOI: 10.4319/Lo.2014.59.4.1321  1
2014 Jacquot JE, Horak REA, Amin SA, Devol AH, Ingalls AE, Armbrust EV, Stahl DA, Moffett JW. Assessment of the potential for copper limitation of ammonia oxidation by Archaea in a dynamic estuary Marine Chemistry. 162: 37-49. DOI: 10.1016/J.Marchem.2014.02.002  1
2013 Close HG, Shah SR, Ingalls AE, Diefendorf AF, Brodie EL, Hansman RL, Freeman KH, Aluwihare LI, Pearson A. Export of submicron particulate organic matter to mesopelagic depth in an oligotrophic gyre. Proceedings of the National Academy of Sciences of the United States of America. 110: 12565-70. PMID 23858459 DOI: 10.1073/Pnas.1217514110  1
2013 Horak RE, Qin W, Schauer AJ, Armbrust EV, Ingalls AE, Moffett JW, Stahl DA, Devol AH. Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea. The Isme Journal. 7: 2023-33. PMID 23657360 DOI: 10.1038/Ismej.2013.75  1
2013 Bridoux MC, Ingalls AE. Diatom microfossils from cretaceous and eocene sediments contain native silica precipitating long-chain polyamines Geobiology. 11: 215-223. PMID 23418943 DOI: 10.1111/Gbi.12028  1
2013 Amin SA, Moffett JW, Martens-Habbena W, Jacquot JE, Han Y, Devol A, Ingalls AE, Stahl DA, Armbrust EV. Copper requirements of the ammonia-oxidizing archaeon Nitrosopumilus maritimus SCM1 and implications for nitrification in the marine environment Limnology and Oceanography. 58: 2037-2045. DOI: 10.4319/Lo.2013.58.6.2037  1
2013 Pearson A, Ingalls AE. Assessing the use of archaeal lipids as marine environmental proxies Annual Review of Earth and Planetary Sciences. 41: 359-384. DOI: 10.1146/Annurev-Earth-050212-123947  1
2013 Martin EE, Ingalls AE, Richey JE, Keil RG, Santos GM, Truxal LT, Alin SR, Druffel ERM. Age of riverine carbon suggests rapid export of terrestrial primary production in tropics Geophysical Research Letters. 40: 5687-5691. DOI: 10.1002/2013Gl057450  1
2013 Schouten S, Hopmans EC, Rosell-Melé A, Pearson A, Adam P, Bauersachs T, Bard E, Bernasconi SM, Bianchi TS, Brocks JJ, Carlson LT, Castañeda IS, Derenne S, Selver AD, Dutta K, ... ... Ingalls A, et al. An interlaboratory study of TEX86 and BIT analysis of sediments, extracts, and standard mixtures Geochemistry, Geophysics, Geosystems. 14: 5263-5285. DOI: 10.1002/2013Gc004904  1
2012 Ingalls AE, Huguet C, Truxal LT. Distribution of intact and core membrane lipids of archaeal glycerol dialkyl glycerol tetraethers among size-fractionated particulate organic matter in hood canal, puget sound. Applied and Environmental Microbiology. 78: 1480-90. PMID 22226949 DOI: 10.1128/Aem.07016-11  1
2012 Ellis EE, Keil RG, Ingalls AE, Richey JE, Alin SR. Seasonal variability in the sources of particulate organic matter of the Mekong River as discerned by elemental and lignin analyses Journal of Geophysical Research: Biogeosciences. 117. DOI: 10.1029/2011Jg001816  1
2012 Bridoux MC, Annenkov VV, Keil RG, Ingalls AE. Widespread distribution and molecular diversity of diatom frustule bound aliphatic long chain polyamines (LCPAs) in marine sediments Organic Geochemistry. 48: 9-20. DOI: 10.1016/J.Orggeochem.2012.04.002  1
2012 Bridoux MC, Keil RG, Ingalls AE. Analysis of natural diatom communities reveals novel insights into the diversity of long chain polyamine (LCPA) structures involved in silica precipitation Organic Geochemistry. 47: 9-21. DOI: 10.1016/J.Orggeochem.2012.02.010  1
2011 Bridoux MC, Annenkov VV, Menzel H, Keil RG, Ingalls AE. A new liquid chromatography/electrospray ionization mass spectrometry method for the analysis of underivatized aliphatic long-chain polyamines: application to diatom-rich sediments. Rapid Communications in Mass Spectrometry : Rcm. 25: 877-88. PMID 21416524 DOI: 10.1002/Rcm.4931  1
2011 Shevenell AE, Ingalls AE, Domack EW, Kelly C. Holocene Southern Ocean surface temperature variability west of the Antarctic Peninsula. Nature. 470: 250-4. PMID 21307939 DOI: 10.1038/Nature09751  1
2011 Shevenell AE, Ingalls AE, Domack EW, Kelly C. Holocene Southern Ocean surface temperature variability west of the Antarctic Peninsula Nature. 472: 247. DOI: 10.1038/nature09931  1
2010 Ingalls AE, Ellis EE, Santos GM, McDuffee KE, Truxal L, Keil RG, Druffel ER. HPLC purification of higher plant-dervied lignin phenols for compound specific radiocarbon analysis. Analytical Chemistry. 82: 8931-8. PMID 20886820 DOI: 10.1021/Ac1016584  1
2010 Huguet C, Martens-Habbena W, Urakawa H, Stahl DA, Ingalls AE. Comparison of extraction methods for quantitative analysis of core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in environmental samples Limnology and Oceanography: Methods. 8: 127-145. DOI: 10.4319/Lom.2010.8.127  1
2010 Huguet C, Urakawa H, Martens-Habbena W, Truxal L, Stahl DA, Ingalls AE. Changes in intact membrane lipid content of archaeal cells as an indication of metabolic status Organic Geochemistry. 41: 930-934. DOI: 10.1016/J.Orggeochem.2010.04.012  1
2010 Bridoux MC, Ingalls AE. Structural identification of long-chain polyamines associated with diatom biosilica in a Southern Ocean sediment core Geochimica Et Cosmochimica Acta. 74: 4044-4057. DOI: 10.1016/J.Gca.2010.04.010  1
2010 Ingalls AE, Whitehead K, Bridoux MC. Tinted windows: The presence of the UV absorbing compounds called mycosporine-like amino acids embedded in the frustules of marine diatoms Geochimica Et Cosmochimica Acta. 74: 104-115. DOI: 10.1016/J.Gca.2009.09.012  1
2009 Hansman RL, Griffin S, Watson JT, Druffel ER, Ingalls AE, Pearson A, Aluwihare LI. The radiocarbon signature of microorganisms in the mesopelagic ocean. Proceedings of the National Academy of Sciences of the United States of America. 106: 6513-8. PMID 19366673 DOI: 10.1073/Pnas.0810871106  1
2009 Schouten S, Hopmans EC, Van Der Meer J, Mets A, Bard E, Bianchi TS, Diefendorf A, Escala M, Freeman KH, Furukawa Y, Huguet C, Ingalls A, Ménot-Combes G, Nederbragt AJ, Oba M, et al. An interlaboratory study of TEX86 and BIT analysis using high-performance liquid chromatography-mass spectrometry Geochemistry, Geophysics, Geosystems. 10. DOI: 10.1029/2008Gc002221  1
2008 de la Torre JR, Walker CB, Ingalls AE, Könneke M, Stahl DA. Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol. Environmental Microbiology. 10: 810-8. PMID 18205821 DOI: 10.1111/J.1462-2920.2007.01506.X  1
2008 Walsh EM, Ingalls AE, Keil RG. Sources and transport of terrestrial organic matter in Vancouver Island fjords and the Vancouver-Washington Margin: A multiproxy approach using δ13Corg, lignin phenols, and the ether lipid BIT index Limnology and Oceanography. 53: 1054-1063. DOI: 10.4319/Lo.2008.53.3.1054  1
2006 Ingalls AE, Shah SR, Hansman RL, Aluwihare LI, Santos GM, Druffel ER, Pearson A. Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon. Proceedings of the National Academy of Sciences of the United States of America. 103: 6442-7. PMID 16614070 DOI: 10.1073/Pnas.0510157103  1
2006 Ingalls AE, Liu Z, Lee C. Seasonal trends in the pigment and amino acid compositions of sinking particles in biogenic CaCO3 and SiO2 dominated regions of the Pacific sector of the Southern Ocean along 170°W Deep-Sea Research Part I: Oceanographic Research Papers. 53: 836-859. DOI: 10.1016/j.dsr.2006.01.004  1
2005 Ingalls AE, Pearson A. Ten years of compound-specific radiocarbon analysis Oceanography. 18: 18-31. DOI: 10.5670/Oceanog.2005.22  1
2004 Pearson A, Huang Z, Ingalls AE, Romanek CS, Wiegel J, Freeman KH, Smittenberg RH, Zhang CL. Nonmarine crenarchaeol in Nevada hot springs Applied and Environmental Microbiology. 70: 5229-5237. PMID 15345404 DOI: 10.1128/Aem.70.9.5229-5237.2004  1
2004 Ingalls AE, Anderson RF, Pearson A. Radiocarbon dating of diatom-bound organic compounds Marine Chemistry. 92: 91-105. DOI: 10.1016/J.Marchem.2004.06.019  1
2004 Ingalls AE, Aller RC, Lee C, Wakeham SG. Organic matter diagenesis in shallow water carbonate sediments Geochimica Et Cosmochimica Acta. 68: 4363-4379. DOI: 10.1016/J.Gca.2004.01.002  1
2003 Ingalls AE, Lee C, Wakeham SG, Hedges JI. The role of biominerals in the sinking flux and preservation of amino acids in the Southern Ocean along 170°W Deep-Sea Research Part Ii: Topical Studies in Oceanography. 50: 713-738. DOI: 10.1016/S0967-0645(02)00592-1  1
2003 Ingalls AE, Lee C, Druffel ERM. Preservation of organic matter in mound-forming coral skeletons Geochimica Et Cosmochimica Acta. 67: 2827-2841. DOI: 10.1016/S0016-7037(03)00079-6  1
2000 Ingalls AE, Aller RC, Lee C, Sun MY. The influence of deposit-feeding on chlorophyll-a degradation in coastal marine sediments Journal of Marine Research. 58: 631-651. DOI: 10.1357/002224000321511052  1
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