Andrew I. Brooks - Publications

Affiliations: 
Functional Genomics Center, Environmental Medicine University of Rochester, Rochester, NY 

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2012 Pettit AP, Brooks A, Laumbach R, Fiedler N, Wang Q, Strickland PO, Madura K, Zhang J, Kipen HM. Alteration of peripheral blood monocyte gene expression in humans following diesel exhaust inhalation. Inhalation Toxicology. 24: 172-81. PMID 22369193 DOI: 10.3109/08958378.2012.654856  0.328
2009 Plekhanova O, Berk BC, Bashtrykov P, Brooks AI, Tkachuk V, Parfyonova Y. Oligonucleotide microarrays reveal regulated genes related to inward arterial remodeling induced by urokinase plasminogen activator. Journal of Vascular Research. 46: 177-87. PMID 18812699 DOI: 10.1159/000156703  0.331
2007 Chow N, Bell RD, Deane R, Streb JW, Chen J, Brooks A, Van Nostrand W, Miano JM, Zlokovic BV. Serum response factor and myocardin mediate arterial hypercontractility and cerebral blood flow dysregulation in Alzheimer's phenotype. Proceedings of the National Academy of Sciences of the United States of America. 104: 823-8. PMID 17215356 DOI: 10.1073/Pnas.0608251104  0.328
2007 Bemis JC, Alejandro NF, Nazarenko DA, Brooks AI, Baggs RB, Gasiewicz TA. TCDD-induced alterations in gene expression profiles of the developing mouse paw do not influence morphological differentiation of this potential target tissue. Toxicological Sciences : An Official Journal of the Society of Toxicology. 95: 240-8. PMID 17035482 DOI: 10.1093/Toxsci/Kfl132  0.404
2006 Klugmann M, Leichtlein CB, Symes CW, Klaussner BC, Brooks AI, Young D, During MJ. A novel role of circadian transcription factor DBP in hippocampal plasticity. Molecular and Cellular Neurosciences. 31: 303-14. PMID 16257226 DOI: 10.1016/J.Mcn.2005.09.019  0.351
2005 Wu Z, Guo H, Chow N, Sallstrom J, Bell RD, Deane R, Brooks AI, Kanagala S, Rubio A, Sagare A, Liu D, Li F, Armstrong D, Gasiewicz T, Zidovetzki R, et al. Role of the MEOX2 homeobox gene in neurovascular dysfunction in Alzheimer disease. Nature Medicine. 11: 959-65. PMID 16116430 DOI: 10.1038/Nm1287  0.378
2005 Fatemi SH, Pearce DA, Brooks AI, Sidwell RW. Prenatal viral infection in mouse causes differential expression of genes in brains of mouse progeny: a potential animal model for schizophrenia and autism. Synapse (New York, N.Y.). 57: 91-9. PMID 15906383 DOI: 10.1002/Syn.20162  0.381
2005 Qiu X, Brooks AI, Klebanov L, Yakovlev N. The effects of normalization on the correlation structure of microarray data. Bmc Bioinformatics. 6: 120. PMID 15904488 DOI: 10.1186/1471-2105-6-120  0.374
2004 Kim SY, Li J, Bentsman G, Brooks AI, Volsky DJ. Microarray analysis of changes in cellular gene expression induced by productive infection of primary human astrocytes: implications for HAD. Journal of Neuroimmunology. 157: 17-26. PMID 15579276 DOI: 10.1016/J.Jneuroim.2004.08.032  0.363
2004 Chattopadhyay S, Kingsley E, Serour A, Curran TM, Brooks AI, Pearce DA. Altered gene expression in the eye of a mouse model for batten disease. Investigative Ophthalmology & Visual Science. 45: 2893-905. PMID 15326100 DOI: 10.1167/Iovs.04-0143  0.354
2004 Mobbs CV, Yen K, Mastaitis J, Nguyen H, Watson E, Wurmbach E, Sealfon SC, Brooks A, Salton SR. Mining microarrays for metabolic meaning: nutritional regulation of hypothalamic gene expression. Neurochemical Research. 29: 1093-103. PMID 15176466 DOI: 10.1023/B:Nere.0000023596.49140.E0  0.391
2004 Welle S, Brooks AI, Delehanty JM, Needler N, Bhatt K, Shah B, Thornton CA. Skeletal muscle gene expression profiles in 20-29 year old and 65-71 year old women. Experimental Gerontology. 39: 369-77. PMID 15036396 DOI: 10.1016/J.Exger.2003.11.011  0.333
2004 Musatov S, Roberts J, Brooks AI, Pena J, Betchen S, Pfaff DW, Kaplitt MG. Inhibition of neuronal phenotype by PTEN in PC12 cells. Proceedings of the National Academy of Sciences of the United States of America. 101: 3627-31. PMID 14990793 DOI: 10.1073/Pnas.0308289101  0.326
2004 Wang Z, Trillo-Pazos G, Kim SY, Canki M, Morgello S, Sharer LR, Gelbard HA, Su ZZ, Kang DC, Brooks AI, Fisher PB, Volsky DJ. Effects of human immunodeficiency virus type 1 on astrocyte gene expression and function: potential role in neuropathogenesis. Journal of Neurovirology. 10: 25-32. PMID 14982736 DOI: 10.1080/753312749  0.312
2003 Welle S, Brooks AI, Delehanty JM, Needler N, Thornton CA. Gene expression profile of aging in human muscle. Physiological Genomics. 14: 149-59. PMID 12783983 DOI: 10.1152/Physiolgenomics.00049.2003  0.377
2003 Yao PJ, Zhu M, Pyun EI, Brooks AI, Therianos S, Meyers VE, Coleman PD. Defects in expression of genes related to synaptic vesicle trafficking in frontal cortex of Alzheimer's disease. Neurobiology of Disease. 12: 97-109. PMID 12667465 DOI: 10.1016/S0969-9961(02)00009-8  0.356
2003 Wagner VE, Bushnell D, Passador L, Brooks AI, Iglewski BH. Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: effects of growth phase and environment. Journal of Bacteriology. 185: 2080-95. PMID 12644477 DOI: 10.1128/Jb.185.7.2080-2095.2003  0.381
2003 Elshatory Y, Brooks AI, Chattopadhyay S, Curran TM, Gupta P, Ramalingam V, Hofmann SL, Pearce DA. Early changes in gene expression in two models of Batten disease. Febs Letters. 538: 207-12. PMID 12633880 DOI: 10.1016/S0014-5793(03)00162-5  0.401
2003 Brooks AI, Chattopadhyay S, Mitchison HM, Nussbaum RL, Pearce DA. Functional categorization of gene expression changes in the cerebellum of a Cln3-knockout mouse model for Batten disease. Molecular Genetics and Metabolism. 78: 17-30. PMID 12559844 DOI: 10.1016/S1096-7192(02)00201-9  0.417
2003 Bijlani R, Cheng Y, Pearce DA, Brooks AI, Ogihara M. Prediction of biologically significant components from microarray data: Independently Consistent Expression Discriminator (ICED). Bioinformatics (Oxford, England). 19: 62-70. PMID 12499294 DOI: 10.1093/Bioinformatics/19.1.62  0.355
2003 Plekhanova O, Solomatina M, Viborov O, Bashtrikov P, Brooks A, Naumov V, Tkachuk V, Berk B, Parfyonova Y. 4P-1140 Oligonucleotide microarrays reveal regulated genes causing opposite arterial remodeling induced by Plasminogen activators Atherosclerosis Supplements. 4: 325. DOI: 10.1016/S1567-5688(03)91396-1  0.354
2002 Brooks AI, Stein CS, Hughes SM, Heth J, McCray PM, Sauter SL, Johnston JC, Cory-Slechta DA, Federoff HJ, Davidson BL. Functional correction of established central nervous system deficits in an animal model of lysosomal storage disease with feline immunodeficiency virus-based vectors. Proceedings of the National Academy of Sciences of the United States of America. 99: 6216-21. PMID 11959904 DOI: 10.1073/Pnas.082011999  0.345
2002 Halaby IA, Lyden SP, Davies MG, Roztocil E, Salamone LJ, Brooks AI, Green RM, Federoff HJ, Bowers WJ. Glucocorticoid-regulated VEGF expression in ischemic skeletal muscle. Molecular Therapy : the Journal of the American Society of Gene Therapy. 5: 300-6. PMID 11863420 DOI: 10.1006/Mthe.2002.0539  0.339
2001 Bowers WJ, Howard DF, Brooks AI, Halterman MW, Federoff HJ. Expression of vhs and VP16 during HSV-1 helper virus-free amplicon packaging enhances titers. Gene Therapy. 8: 111-20. PMID 11313780 DOI: 10.1038/Sj.Gt.3301340  0.305
2001 Welle S, Brooks A, Thornton CA. Senescence-related changes in gene expression in muscle: similarities and differences between mice and men. Physiological Genomics. 5: 67-73. PMID 11242590 DOI: 10.1152/Physiolgenomics.2001.5.2.67  0.376
2000 Brooks AI, Cory-Slechta DA, Bowers WJ, Murg SL, Federoff HJ. Enhanced learning in mice parallels vector-mediated nerve growth factor expression in hippocampus. Human Gene Therapy. 11: 2341-52. PMID 11096439 DOI: 10.1089/104303400750038453  0.304
2000 Brooks AI, Cory-Slechta DA, Federoff HJ. Gene-experience interaction alters the cholinergic septohippocampal pathway of mice. Proceedings of the National Academy of Sciences of the United States of America. 97: 13378-83. PMID 11078505 DOI: 10.1073/Pnas.230169397  0.394
2000 Tong N, Perry SW, Zhang Q, James HJ, Guo H, Brooks A, Bal H, Kinnear SA, Fine S, Epstein LG, Dairaghi D, Schall TJ, Gendelman HE, Dewhurst S, Sharer LR, et al. Neuronal fractalkine expression in HIV-1 encephalitis: roles for macrophage recruitment and neuroprotection in the central nervous system. Journal of Immunology (Baltimore, Md. : 1950). 164: 1333-9. PMID 10640747 DOI: 10.4049/Jimmunol.164.3.1333  0.303
1999 Brooks AI, Halterman MW, Federoff HJ. Focal hippocampal gain of NGF function elicits specific septal cholinergic reorganization. Neuroreport. 10: 337-44. PMID 10203332 DOI: 10.1097/00001756-199902050-00024  0.32
1998 Brooks AI, Halterman MW, Chadwick CA, Davidson BL, Haak-Frendscho M, Radel C, Porter C, Federoff HJ. Reproducible and efficient murine CNS gene delivery using a microprocessor-controlled injector. Journal of Neuroscience Methods. 80: 137-47. PMID 9667386 DOI: 10.1016/S0165-0270(97)00207-0  0.343
1997 Federoff HJ, Halterman MW, Brooks AI. Use of the herpes amplicon system as a vehicle for somatic gene transfer. Advanced Drug Delivery Reviews. 27: 29-39. PMID 10837549 DOI: 10.1016/S0169-409X(97)00020-3  0.336
1997 Federoff HJ, Brooks A, Muhkerjee B, Corden T. Somatic gene transfer approaches to manipulate neural networks. Journal of Neuroscience Methods. 71: 133-42. PMID 9125382 DOI: 10.1016/S0165-0270(96)00133-1  0.387
1997 Brooks AI, Muhkerjee B, Panahian N, Cory-Slechta D, Federoff HJ. Nerve growth factor somatic mosaicism produced by herpes virus-directed expression of cre recombinase. Nature Biotechnology. 15: 57-62. PMID 9035107 DOI: 10.1038/Nbt0197-57  0.378
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