Seok-Yong Lee, Ph.D. - Publications

Affiliations: 
2003 University of California, Berkeley, Berkeley, CA, United States 
Area:
Biophysical Chemistry: Proteins, Nucleic Acids, NMR Spectroscopy

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kwon DH, Zhang F, McCray BA, Feng S, Kumar M, Sullivan JM, Im W, Sumner CJ, Lee SY. TRPV4-Rho GTPase complex structures reveal mechanisms of gating and disease. Nature Communications. 14: 3732. PMID 37353484 DOI: 10.1038/s41467-023-39345-0  0.313
2023 Kwon DH, Zhang F, McCray BA, Kumar M, Sullivan JM, Sumner CJ, Lee SY. Structural insights into TRPV4-Rho GTPase signaling complex function and disease. Biorxiv : the Preprint Server For Biology. PMID 36993766 DOI: 10.1101/2023.03.15.532784  0.304
2022 Yin Y, Zhang F, Feng S, Butay KJ, Borgnia MJ, Im W, Lee SY. Activation mechanism of the mouse cold-sensing TRPM8 channel by cooling agonist and PIP. Science (New York, N.Y.). 378: eadd1268. PMID 36227998 DOI: 10.1126/science.add1268  0.315
2021 Suo Y, Lee SY. Sample preparation of the human TRPA1 ion channel for cryo-EM studies. Methods in Enzymology. 653: 75-87. PMID 34099182 DOI: 10.1016/bs.mie.2020.12.018  0.305
2020 Lee JH, Park CK, Chen G, Han Q, Xie RG, Liu T, Ji RR, Lee SY. Retraction Notice to: A Monoclonal Antibody that Targets a Na1.7 Channel Voltage Sensor for Pain and Itch Relief. Cell. 181: 1695. PMID 32589960 DOI: 10.1016/J.Cell.2020.06.019  0.312
2020 Yin Y, Lee SY. Current View of Ligand and Lipid Recognition by the Menthol Receptor TRPM8. Trends in Biochemical Sciences. PMID 32532587 DOI: 10.1016/J.Tibs.2020.05.008  0.407
2020 Mashalidis EH, Lee SY. Structures of Bacterial MraY and Human GPT Provide Insights into Rational Antibiotic Design. Journal of Molecular Biology. PMID 32199982 DOI: 10.1016/J.Jmb.2020.03.017  0.31
2019 Suo Y, Wang Z, Zubcevic L, Hsu AL, He Q, Borgnia MJ, Ji RR, Lee SY. Structural Insights into Electrophile Irritant Sensing by the Human TRPA1 Channel. Neuron. PMID 31866091 DOI: 10.2210/Pdb6Pqp/Pdb  0.768
2019 Pitt GS, Lee SY. Ca/CaM interaction with voltage-gated Na channels. Proceedings of the National Academy of Sciences of the United States of America. PMID 31796599 DOI: 10.1073/Pnas.1909835116  0.333
2019 Yin Y, Wu M, Hsu AL, Borschel WF, Borgnia MJ, Lander GC, Lee SY. Visualizing structural transitions of ligand-dependent gating of the TRPM2 channel. Nature Communications. 10: 3740. PMID 31431622 DOI: 10.1038/S41467-019-11733-5  0.428
2019 Zubcevic L, Lee SY. The role of π-helices in TRP channel gating. Current Opinion in Structural Biology. PMID 31378426 DOI: 10.1016/J.Sbi.2019.06.011  0.753
2019 Mashalidis EH, Kaeser B, Terasawa Y, Katsuyama A, Kwon DY, Lee K, Hong J, Ichikawa S, Lee SY. Chemical logic of MraY inhibition by antibacterial nucleoside natural products. Nature Communications. 10: 2917. PMID 31266949 DOI: 10.2210/Pdb6Oyh/Pdb  0.319
2019 Wright NJ, Lee SY. Structures of human ENT1 in complex with adenosine reuptake inhibitors. Nature Structural & Molecular Biology. 26: 599-606. PMID 31235912 DOI: 10.2210/Pdb6Ob6/Pdb  0.373
2019 Zubcevic L, Hsu AL, Borgnia MJ, Lee SY. Symmetry transitions during gating of the TRPV2 ion channel in lipid membranes. Elife. 8. PMID 31090543 DOI: 10.7554/Elife.45779  0.76
2019 Zubcevic L, Borschel WF, Hsu AL, Borgnia MJ, Lee SY. Regulatory switch at the cytoplasmic interface controls TRPV channel gating. Elife. 8. PMID 31070581 DOI: 10.2210/Pdb6Ot2/Pdb  0.755
2019 Kuk ACY, Hao A, Guan Z, Lee SY. Visualizing conformation transitions of the Lipid II flippase MurJ. Nature Communications. 10: 1736. PMID 30988294 DOI: 10.2210/Pdb6Nc6/Pdb  0.338
2019 Yin Y, Le SC, Hsu AL, Borgnia MJ, Yang H, Lee SY. Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel. Science (New York, N.Y.). PMID 30733385 DOI: 10.2210/Pdb6Nr2/Pdb  0.418
2019 Csanády L, Lee S, Rohacs T. Decision letter: The ion selectivity filter is not an activation gate in TRPV1-3 channels Elife. DOI: 10.7554/Elife.51212.Sa1  0.339
2019 Zubcevic L, Borschel WF, Hsu AL, Borgnia MJ, Lee S. Author response: Regulatory switch at the cytoplasmic interface controls TRPV channel gating Elife. DOI: 10.7554/Elife.47746.038  0.728
2019 Miller AN, Lee S. Decision letter: Cryo-EM structures and functional characterization of murine Slc26a9 reveal mechanism of uncoupled chloride transport Elife. DOI: 10.7554/Elife.46986.051  0.331
2019 Zubcevic L, Hsu AL, Borgnia MJ, Lee S. Author response: Symmetry transitions during gating of the TRPV2 ion channel in lipid membranes Elife. DOI: 10.7554/Elife.45779.047  0.73
2018 Zubcevic L, Herzik MA, Wu M, Borschel WF, Hirschi M, Song AS, Lander GC, Lee SY. Conformational ensemble of the human TRPV3 ion channel. Nature Communications. 9: 4773. PMID 30429472 DOI: 10.1038/s41467-018-07117-w  0.753
2018 Yoo J, Wu M, Yin Y, Herzik MA, Lander GC, Lee SY. Cryo-EM structure of a mitochondrial calcium uniporter. Science (New York, N.Y.). PMID 29954988 DOI: 10.1126/science.aar4056  0.355
2018 Zubcevic L, Le S, Yang H, Lee SY. Conformational plasticity in the selectivity filter of the TRPV2 ion channel. Nature Structural & Molecular Biology. 25: 405-415. PMID 29728656 DOI: 10.2210/Pdb6Bwj/Pdb  0.746
2018 Yoo J, Mashalidis EH, Kuk ACY, Yamamoto K, Kaeser B, Ichikawa S, Lee SY. GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation. Nature Structural & Molecular Biology. PMID 29459785 DOI: 10.1038/S41594-018-0031-Y  0.302
2018 Bang S, Yoo J, Gong X, Liu D, Han Q, Luo X, Chang W, Chen G, Im ST, Kim YH, Strong JA, Zhang MZ, Zhang JM, Lee SY, Ji RR. Differential Inhibition of Nav1.7 and Neuropathic Pain by Hybridoma-Produced and Recombinant Monoclonal Antibodies that Target Nav1.7 : Differential activities of Nav1.7-targeting monoclonal antibodies. Neuroscience Bulletin. PMID 29333591 DOI: 10.1007/S12264-018-0203-0  0.311
2017 Yin Y, Wu M, Zubcevic L, Borschel WF, Lander GC, Lee SY. Structure of the cold- and menthol-sensing ion channel TRPM8. Science (New York, N.Y.). PMID 29217583 DOI: 10.1126/Science.Aan4325  0.757
2017 Hirschi M, Herzik MA, Wie J, Suo Y, Borschel WF, Ren D, Lander GC, Lee SY. Cryo-electron microscopy structure of the lysosomal calcium-permeable channel TRPML3. Nature. PMID 29019979 DOI: 10.1038/Nature24055  0.455
2017 Hirschi M, Johnson ZL, Lee SY. Visualizing multistep elevator-like transitions of a nucleoside transporter. Nature. PMID 28424521 DOI: 10.1038/Nature22057  0.714
2017 Hirschi MM, Johnson ZL, Lee S. Structural Basis of Concentrative Nucleoside Transport Biophysical Journal. 112: 22a. DOI: 10.1016/J.Bpj.2016.11.155  0.718
2016 Kuk AC, Mashalidis EH, Lee SY. Crystal structure of the MOP flippase MurJ in an inward-facing conformation. Nature Structural & Molecular Biology. PMID 28024149 DOI: 10.1038/Nsmb.3346  0.388
2016 Pitt GS, Lee SY. Current view on regulation of voltage-gated sodium channels by calcium and auxiliary proteins. Protein Science : a Publication of the Protein Society. PMID 27262167 DOI: 10.1002/Pro.2960  0.384
2016 Chung BC, Mashalidis EH, Tanino T, Kim M, Matsuda A, Hong J, Ichikawa S, Lee SY. Structural insights into inhibition of lipid I production in bacterial cell wall synthesis. Nature. PMID 27088606 DOI: 10.1038/Nature17636  0.323
2016 Zubcevic L, Herzik MA, Chung BC, Liu Z, Lander GC, Lee SY. Cryo-electron microscopy structure of the TRPV2 ion channel. Nature Structural & Molecular Biology. PMID 26779611 DOI: 10.1038/Nsmb.3159  0.766
2016 Jeong MG, Kim DH, Lee SK, Lee JH, Han SW, Park EJ, Cychosz KA, Thommes M, Hwang YK, Chang JS, Kim YD. Decoration of the internal structure of mesoporous chromium terephthalate MIL-101 with NiO using atomic layer deposition Microporous and Mesoporous Materials. 221: 101-107. DOI: 10.1016/J.Micromeso.2015.09.027  0.455
2015 Kim SJ, Han KT, Lee SY, Chun SY, Park EC. Is secondhand smoke associated with stress in smokers and non-smokers? Bmc Public Health. 15: 1249. PMID 26679934 DOI: 10.1186/s12889-015-2612-6  0.416
2015 Han KT, Kim SJ, Kim W, Jang SI, Yoo KB, Lee SY, Park EC. Associations of volume and other hospital characteristics on mortality within 30 days of acute myocardial infarction in South Korea. Bmj Open. 5: e009186. PMID 26546143 DOI: 10.1136/bmjopen-2015-009186  0.417
2015 Lee SM, Cho YH, Lee SY, Jeong DW, Cho AR, Jeon JS, Park EJ, Kim YJ, Lee JG, Yi YH, Tak YJ, Hwang HR, Lee SH, Han J. Urinary Malondialdehyde Is Associated with Visceral Abdominal Obesity in Middle-Aged Men. Mediators of Inflammation. 2015: 524291. PMID 26538829 DOI: 10.1155/2015/524291  0.416
2015 Park HK, Chun SY, Choi Y, Lee SY, Kim SJ, Park EC. Effects of social activity on health-related quality of life according to age and gender: an observational study. Health and Quality of Life Outcomes. 13: 140. PMID 26361977 DOI: 10.1186/s12955-015-0331-4  0.423
2015 Johnson ZL, Lee SY. Liposome reconstitution and transport assay for recombinant transporters. Methods in Enzymology. 556: 373-83. PMID 25857791 DOI: 10.1016/Bs.Mie.2014.11.048  0.685
2014 Wang C, Chung BC, Yan H, Wang HG, Lee SY, Pitt GS. Structural analyses of Ca²⁺/CaM interaction with NaV channel C-termini reveal mechanisms of calcium-dependent regulation. Nature Communications. 5: 4896. PMID 25232683 DOI: 10.1038/Ncomms5896  0.379
2014 Johnson ZL, Lee JH, Lee K, Lee M, Kwon DY, Hong J, Lee SY. Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters. Elife. 3: e03604. PMID 25082345 DOI: 10.7554/Elife.03604  0.696
2014 Lee JH, Park CK, Chen G, Han Q, Xie RG, Liu T, Ji RR, Lee SY. A monoclonal antibody that targets a NaV1.7 channel voltage sensor for pain and itch relief. Cell. 157: 1393-404. PMID 24856969 DOI: 10.1016/J.Cell.2014.03.064  0.313
2014 Johnson ZL, Lee J, Lee K, Lee M, Kwon D, Hong J, Lee S. Author response: Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters Elife. DOI: 10.7554/Elife.03604.028  0.697
2013 Chung BC, Zhao J, Gillespie RA, Kwon DY, Guan Z, Hong J, Zhou P, Lee SY. Crystal structure of MraY, an essential membrane enzyme for bacterial cell wall synthesis. Science (New York, N.Y.). 341: 1012-6. PMID 23990562 DOI: 10.1126/Science.1236501  0.312
2013 Chung BC, Wang C, Yan H, Pitt G, Lee S. Structure of the Ternary Complex of the C-Terminus of the Voltage-Gated Sodium Channel (NaV) with Calmodulin (CaM) and Fibroblast Growth Factor Homologous Factor (FHF) Biophysical Journal. 104: 137a. DOI: 10.1016/J.Bpj.2012.11.782  0.396
2013 Johnson ZL, Stout SD, Lee S. Structure and Selectivity of a Bacterial Concentrative Nucleoside Transporter Biophysical Journal. 104: 113a. DOI: 10.1016/J.Bpj.2012.11.654  0.718
2013 Johnson Z, Lee S. Sodium Coupling and Nucleoside Specificity of a Concentrative Nucleoside Transporter Biophysical Journal. 104: 23a. DOI: 10.1016/J.Bpj.2012.11.163  0.72
2012 Wang C, Chung BC, Yan H, Lee SY, Pitt GS. Crystal structure of the ternary complex of a NaV C-terminal domain, a fibroblast growth factor homologous factor, and calmodulin. Structure (London, England : 1993). 20: 1167-76. PMID 22705208 DOI: 10.1016/J.Str.2012.05.001  0.437
2012 Johnson ZL, Cheong CG, Lee SY. Crystal structure of a concentrative nucleoside transporter from Vibrio cholerae at 2.4 Å. Nature. 483: 489-93. PMID 22407322 DOI: 10.1038/Nature10882  0.707
2009 Lee SY, Banerjee A, MacKinnon R. Two separate interfaces between the voltage sensor and pore are required for the function of voltage-dependent K(+) channels. Plos Biology. 7: e47. PMID 19260762 DOI: 10.1371/Journal.Pbio.1000047  0.569
2009 Lee SY, Letts JA, MacKinnon R. Functional reconstitution of purified human Hv1 H+ channels. Journal of Molecular Biology. 387: 1055-60. PMID 19233200 DOI: 10.1016/J.Jmb.2009.02.034  0.582
2009 Lee SY, Banerjee A, Mackinnon R. Two separate interfaces between the Voltage sensor and pore are required for the function of Voltage-dependent K+ channels Plos Biology. 7: 0676-0686. DOI: 10.1371/journal.pbio.1000047-S.pdf  0.48
2008 Lee SY, Letts JA, Mackinnon R. Dimeric subunit stoichiometry of the human voltage-dependent proton channel Hv1. Proceedings of the National Academy of Sciences of the United States of America. 105: 7692-5. PMID 18509058 DOI: 10.1073/Pnas.0803277105  0.577
2005 Lee SY, Lee A, Chen J, MacKinnon R. Structure of the KvAP voltage-dependent K+ channel and its dependence on the lipid membrane. Proceedings of the National Academy of Sciences of the United States of America. 102: 15441-6. PMID 16223877 DOI: 10.1073/Pnas.0507651102  0.593
2005 Kim HS, Damo SM, Lee SY, Wemmer D, Klinman JP. Structure and hydride transfer mechanism of a moderate thermophilic dihydrofolate reductase from Bacillus stearothermophilus and comparison to its mesophilic and hyperthermophilic homologues. Biochemistry. 44: 11428-39. PMID 16114879 DOI: 10.1021/Bi050630J  0.701
2005 Roberts A, Lee SY, McCullagh E, Silversmith RE, Wemmer DE. YbiV from Escherichia coli K12 is a HAD phosphatase. Proteins. 58: 790-801. PMID 15657928 DOI: 10.1002/Prot.20267  0.621
2004 Lee SY, MacKinnon R. A membrane-access mechanism of ion channel inhibition by voltage sensor toxins from spider venom. Nature. 430: 232-5. PMID 15241419 DOI: 10.1038/Nature02632  0.558
2003 Lee SY, De La Torre A, Yan D, Kustu S, Nixon BT, Wemmer DE. Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains. Genes & Development. 17: 2552-63. PMID 14561776 DOI: 10.1101/Gad.1125603  0.543
2003 Hastings CA, Lee SY, Cho HS, Yan D, Kustu S, Wemmer DE. High-resolution solution structure of the beryllofluoride-activated NtrC receiver domain. Biochemistry. 42: 9081-90. PMID 12885241 DOI: 10.1021/Bi0273866  0.56
2003 Gardino AK, Volkman BF, Cho HS, Lee SY, Wemmer DE, Kern D. The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system. Journal of Molecular Biology. 331: 245-54. PMID 12875849 DOI: 10.1016/S0022-2836(03)00733-2  0.715
2002 Rubin SM, Lee SY, Ruiz EJ, Pines A, Wemmer DE. Detection and characterization of xenon-binding sites in proteins by 129Xe NMR spectroscopy. Journal of Molecular Biology. 322: 425-40. PMID 12217701 DOI: 10.1016/S0022-2836(02)00739-8  0.691
2001 Lee SY, Cho HS, Pelton JG, Yan D, Berry EA, Wemmer DE. Crystal structure of activated CheY. Comparison with other activated receiver domains. The Journal of Biological Chemistry. 276: 16425-31. PMID 11279165 DOI: 10.1074/Jbc.M101002200  0.524
2001 Lee SY, Cho HS, Pelton JG, Yan D, Henderson RK, King DS, Huang L, Kustu S, Berry EA, Wemmer DE. Crystal structure of an activated response regulator bound to its target. Nature Structural Biology. 8: 52-6. PMID 11135671 DOI: 10.1038/83053  0.524
2000 Cho HS, Lee SY, Yan D, Pan X, Parkinson JS, Kustu S, Wemmer DE, Pelton JG. NMR structure of activated CheY. Journal of Molecular Biology. 297: 543-51. PMID 10731410 DOI: 10.1006/Jmbi.2000.3595  0.498
1999 Yan D, Cho HS, Hastings CA, Igo MM, Lee SY, Pelton JG, Stewart V, Wemmer DE, Kustu S. Beryllofluoride mimics phosphorylation of NtrC and other bacterial response regulators. Proceedings of the National Academy of Sciences of the United States of America. 96: 14789-94. PMID 10611291 DOI: 10.1073/Pnas.96.26.14789  0.545
1998 Li HL, Sui HX, Ghanshani S, Lee S, Walian PJ, Wu CL, Chandy KG, Jap BK. Two-dimensional crystallization and projection structure of KcsA potassium channel Journal of Molecular Biology. 282: 211-216. PMID 9735281 DOI: 10.1006/Jmbi.1998.2016  0.398
1998 Sui HX, Li HL, Ghanshani S, Lee S, Walian PJ, Wu CL, Chandy KG, Jap BK. Electron Crystallography of a Prokaryotic Potassium Channel Microscopy and Microanalysis. 4: 466-467. DOI: 10.1017/S1431927600022455  0.354
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