| Year |
Citation |
Score |
| 2020 |
Moon JW, Paradis CJ, Joyner DC, von Netzer F, Majumder EL, Dixon ER, Podar M, Ge X, Walian PJ, Smith HJ, Wu X, Zane GM, Walker KF, Thorgersen MP, Poole Ii FL, ... ... Elias DA, et al. Characterization of subsurface media from locations up- and down-gradient of a uranium-contaminated aquifer. Chemosphere. 255: 126951. PMID 32417512 DOI: 10.1016/J.Chemosphere.2020.126951 |
0.354 |
|
| 2019 |
Zelaya AJ, Parker AE, Bailey KL, Zhang P, Van Nostrand J, Ning D, Elias DA, Zhou J, Hazen TC, Arkin AP, Fields MW. High spatiotemporal variability of bacterial diversity over short time scales with unique hydrochemical associations within a shallow aquifer. Water Research. 164: 114917. PMID 31387058 DOI: 10.1016/J.Watres.2019.114917 |
0.311 |
|
| 2019 |
Christensen GA, Gionfriddo CM, King AJ, Moberly JG, Miller CL, Somenahally AC, Callister SJ, Brewer H, Podar M, Brown SD, Palumbo AV, Brandt CC, Wymore AM, Brooks SC, Hwang C, ... ... Elias DA, et al. Determining the Reliability of Measuring Mercury Cycling Gene Abundance with Correlations with Mercury and Methylmercury Concentrations. Environmental Science & Technology. PMID 31260289 DOI: 10.1021/Acs.Est.8B06389 |
0.393 |
|
| 2018 |
Smith HJ, Zelaya AJ, De León KB, Chakraborty R, Elias DA, Hazen TC, Arkin AP, Cunningham AB, Fields MW. Impact of hydrologic boundaries on microbial planktonic and biofilm communities in shallow terrestrial subsurface environments. Fems Microbiology Ecology. PMID 30265315 DOI: 10.1093/Femsec/Fiy191 |
0.32 |
|
| 2018 |
Paradis CJ, Moon JW, Elias DA, McKay LD, Hazen TC. In situ decay of polyfluorinated benzoic acids under anaerobic conditions. Journal of Contaminant Hydrology. PMID 30201555 DOI: 10.1016/J.Jconhyd.2018.08.009 |
0.317 |
|
| 2018 |
Qian C, Chen H, Johs A, Lu X, An J, Pierce EM, Parks JM, Elias DA, Hettich RL, Gu B. Quantitative Proteomic Analysis of Biological Processes and Responses of the Bacterium Desulfovibrio desulfuricans ND132 upon Deletion of its Mercury Methylation Genes. Proteomics. e1700479. PMID 30009483 DOI: 10.1002/Pmic.201700479 |
0.376 |
|
| 2018 |
Ndu U, Christensen GA, Rivera NA, Gionfriddo CM, Deshusses MA, Elias DA, Hsu-Kim H. Quantification of Mercury Bioavailability for Methylation Using Diffusive Gradient in Thin-Film Samplers. Environmental Science & Technology. PMID 29920204 DOI: 10.1021/Acs.Est.8B00647 |
0.384 |
|
| 2018 |
Gilmour CC, Bullock AL, McBurney A, Podar M, Elias DA. Robust Mercury Methylation across Diverse Methanogenic Archaea. Mbio. 9. PMID 29636434 DOI: 10.1128/Mbio.02403-17 |
0.389 |
|
| 2018 |
Christensen GA, Moon J, Veach AM, Mosher JJ, Wymore AM, van Nostrand JD, Zhou J, Hazen TC, Arkin AP, Elias DA. Use of in-field bioreactors demonstrate groundwater filtration influences planktonic bacterial community assembly, but not biofilm composition. Plos One. 13: e0194663. PMID 29558522 DOI: 10.1371/Journal.Pone.0194663 |
0.311 |
|
| 2018 |
Vishnivetskaya TA, Hu H, Van Nostrand JD, Wymore AM, Xu X, Qiu G, Feng X, Zhou J, Brown SD, Brandt CC, Podar M, Gu B, Elias DA. Microbial community structure with trends in methylation gene diversity and abundance in mercury-contaminated rice paddy soils in Guizhou, China. Environmental Science. Processes & Impacts. PMID 29504614 DOI: 10.1039/C7Em00558J |
0.372 |
|
| 2018 |
He Z, Zhang P, Wu L, Rocha AM, Tu Q, Shi Z, Wu B, Qin Y, Wang J, Yan Q, Curtis D, Ning D, Van Nostrand JD, Wu L, Yang Y, ... Elias DA, et al. Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning. Mbio. 9. PMID 29463661 DOI: 10.1128/Mbio.02435-17 |
0.322 |
|
| 2017 |
Christensen GA, Somenahally AC, Moberly JG, Miller CM, King AJ, Gilmour CC, Brown SD, Podar M, Brandt CC, Brooks SC, Palumbo AV, Wall JD, Elias DA. Carbon Amendments Alter Microbial Community Structure and Net Mercury Methylation Potential in Sediments. Applied and Environmental Microbiology. PMID 29150503 DOI: 10.1128/Aem.01049-17 |
0.419 |
|
| 2017 |
King AJ, Preheim SP, Bailey KL, Robeson MS, Roy Chowdhury T, Crable BR, Hurt RA, Mehlhorn TL, Lowe KA, Phelps TJ, Palumbo AV, Brandt CC, Brown SD, Podar M, Zhang P, ... ... Elias DA, et al. Temporal Dynamics of In-Field Bioreactor Populations Reflect the Groundwater System and Respond Predictably to Perturbation. Environmental Science & Technology. PMID 28112946 DOI: 10.1021/Acs.Est.6B04751 |
0.334 |
|
| 2016 |
Christensen GA, Wymore AM, King AJ, Podar M, Hurt RA, Santillan EU, Soren A, Brandt CC, Brown SD, Palumbo AV, Wall JD, Gilmour CC, Elias DA. Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment. Applied and Environmental Microbiology. PMID 27422835 DOI: 10.1128/Aem.01271-16 |
0.398 |
|
| 2016 |
Kurczy ME, Forsberg EM, Thorgersen MP, Poole FL, Benton HP, Ivanisevic J, Tran ML, Wall JD, Elias DA, Adams MW, Siuzdak G. Global Isotope Metabolomics Reveals Adaptive Strategies for Nitrogen Assimilation in Pseudomonas. Acs Chemical Biology. PMID 27045776 DOI: 10.1021/Acschembio.6B00082 |
0.321 |
|
| 2016 |
Lu X, Liu Y, Johs A, Zhao L, Wang T, Yang Z, Lin H, Elias DA, Pierce EM, Liang L, Barkay T, Gu B. Anaerobic Mercury Methylation and Demethylation by Geobacter bemidjiensis Bem. Environmental Science & Technology. PMID 27019098 DOI: 10.1021/Acs.Est.6B00401 |
0.396 |
|
| 2015 |
Podar M, Gilmour CC, Brandt CC, Soren A, Brown SD, Crable BR, Palumbo AV, Somenahally AC, Elias DA. Global prevalence and distribution of genes and microorganisms involved in mercury methylation. Science Advances. 1: e1500675. PMID 26601305 DOI: 10.1126/Sciadv.1500675 |
0.386 |
|
| 2015 |
De León KB, Utturkar SM, Camilleri LB, Elias DA, Arkin AP, Fields MW, Brown SD, Wall JD. Complete Genome Sequence of Pelosinus fermentans JBW45, a Member of a Remarkably Competitive Group of Negativicutes in the Firmicutes Phylum. Genome Announcements. 3. PMID 26404608 DOI: 10.1128/Genomea.01090-15 |
0.309 |
|
| 2015 |
Smith MB, Rocha AM, Smillie CS, Olesen SW, Paradis C, Wu L, Campbell JH, Fortney JL, Mehlhorn TL, Lowe KA, Earles JE, Phillips J, Techtmann SM, Joyner DC, Elias DA, et al. Natural bacterial communities serve as quantitative geochemical biosensors. Mbio. 6: e00326-15. PMID 25968645 DOI: 10.1128/Mbio.00326-15 |
0.345 |
|
| 2015 |
Smith SD, Bridou R, Johs A, Parks JM, Elias DA, Hurt RA, Brown SD, Podar M, Wall JD. Site-directed mutagenesis of HgcA and HgcB reveals amino acid residues important for mercury methylation. Applied and Environmental Microbiology. 81: 3205-17. PMID 25724962 DOI: 10.1128/Aem.00217-15 |
0.338 |
|
| 2014 |
Brown SD, Utturkar SM, Magnuson TS, Ray AE, Poole FL, Lancaster WA, Thorgersen MP, Adams MW, Elias DA. Complete Genome Sequence of Pelosinus sp. Strain UFO1 Assembled Using Single-Molecule Real-Time DNA Sequencing Technology. Genome Announcements. 2. PMID 25189589 DOI: 10.1128/Genomea.00881-14 |
0.323 |
|
| 2014 |
Roush D, Elias D, Mormile M. Metabolic Capabilities of the Members of the Order Halanaerobiales and Their Potential Biotechnological Applications Current Biotechnology. 3: 3-9. DOI: 10.2174/221155010301140303102741 |
0.302 |
|
| 2014 |
Lin H, Hurt RA, Johs A, Parks JM, Morrell-Falvey JL, Liang L, Elias DA, Gu B. Unexpected Effects of Gene Deletion on Interactions of Mercury with the Methylation-Deficient Mutant ΔhgcAB Environmental Science and Technology Letters. 1: 271-276. DOI: 10.1021/Ez500107R |
0.349 |
|
| 2013 |
Gilmour CC, Podar M, Bullock AL, Graham AM, Brown SD, Somenahally AC, Johs A, Hurt RA, Bailey KL, Elias DA. Mercury methylation by novel microorganisms from new environments. Environmental Science & Technology. 47: 11810-20. PMID 24024607 DOI: 10.1021/Es403075T |
0.398 |
|
| 2013 |
Brown SD, Hurt RA, Gilmour CC, Elias DA. Draft genome sequences for three mercury-methylating, sulfate-reducing bacteria. Genome Announcements. 1. PMID 23950126 DOI: 10.1128/Genomea.00618-13 |
0.352 |
|
| 2013 |
Brown SD, Utturkar SM, Arkin AP, Deutschbauer AM, Elias DA, Hazen TC, Chakraborty R. Draft Genome Sequence for Desulfovibrio africanus Strain PCS. Genome Announcements. 1: e0014413. PMID 23580709 DOI: 10.1128/Genomea.00144-13 |
0.327 |
|
| 2013 |
Parks JM, Johs A, Podar M, Bridou R, Hurt RA, Smith SD, Tomanicek SJ, Qian Y, Brown SD, Brandt CC, Palumbo AV, Smith JC, Wall JD, Elias DA, Liang L. The genetic basis for bacterial mercury methylation. Science (New York, N.Y.). 339: 1332-5. PMID 23393089 DOI: 10.1126/Science.1230667 |
0.387 |
|
| 2013 |
Hu H, Lin H, Zheng W, Tomanicek SJ, Johs A, Feng X, Elias DA, Liang L, Gu B. Oxidation and methylation of dissolved elemental mercury by anaerobic bacteria Nature Geoscience. 6: 751-754. DOI: 10.1038/Ngeo1894 |
0.332 |
|
| 2012 |
Brown SD, Podar M, Klingeman DM, Johnson CM, Yang ZK, Utturkar SM, Land ML, Mosher JJ, Hurt RA, Phelps TJ, Palumbo AV, Arkin AP, Hazen TC, Elias DA. Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7. Journal of Bacteriology. 194: 5147-8. PMID 22933770 DOI: 10.1128/Jb.01174-12 |
0.318 |
|
| 2012 |
Graham AM, Bullock AL, Maizel AC, Elias DA, Gilmour CC. Detailed assessment of the kinetics of Hg-cell association, Hg methylation, and methylmercury degradation in several Desulfovibrio species. Applied and Environmental Microbiology. 78: 7337-46. PMID 22885751 DOI: 10.1128/Aem.01792-12 |
0.344 |
|
| 2012 |
Moberly JG, Miller CL, Brown SD, Biswas A, Brandt CC, Palumbo AV, Elias DA. Role of morphological growth state and gene expression in Desulfovibrio africanus strain Walvis Bay mercury methylation. Environmental Science & Technology. 46: 4926-32. PMID 22500779 DOI: 10.1021/Es3000933 |
0.39 |
|
| 2012 |
Mosher JJ, Phelps TJ, Podar M, Hurt RA, Campbell JH, Drake MM, Moberly JG, Schadt CW, Brown SD, Hazen TC, Arkin AP, Palumbo AV, Faybishenko BA, Elias DA. Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp. Applied and Environmental Microbiology. 78: 2082-91. PMID 22267668 DOI: 10.1128/Aem.07165-11 |
0.374 |
|
| 2012 |
Mosher JJ, Vishnivetskaya TA, Elias DA, Podar M, Brooks SC, Brown SD, Brandt CC, Palumbo AV. Characterization of the Deltaproteobacteria in contaminated and uncontaminated stream sediments and identification of potential mercury methylators Aquatic Microbial Ecology. 66: 271-282. DOI: 10.3354/Ame01563 |
0.407 |
|
| 2011 |
Chhabra SR, Butland G, Elias DA, Chandonia JM, Fok OY, Juba TR, Gorur A, Allen S, Leung CM, Keller KL, Reveco S, Zane GM, Semkiw E, Prathapam R, Gold B, et al. Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome. Applied and Environmental Microbiology. 77: 7595-604. PMID 21908633 DOI: 10.1128/Aem.05495-11 |
0.316 |
|
| 2011 |
Brown SD, Wall JD, Kucken AM, Gilmour CC, Podar M, Brandt CC, Teshima H, Detter JC, Han CS, Land ML, Lucas S, Han J, Pennacchio L, Nolan M, Pitluck S, ... ... Elias DA, et al. Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay. Journal of Bacteriology. 193: 4037-8. PMID 21642452 DOI: 10.1128/Jb.05223-11 |
0.378 |
|
| 2011 |
Gilmour CC, Elias DA, Kucken AM, Brown SD, Palumbo AV, Schadt CW, Wall JD. Sulfate-reducing bacterium Desulfovibrio desulfuricans ND132 as a model for understanding bacterial mercury methylation. Applied and Environmental Microbiology. 77: 3938-51. PMID 21515733 DOI: 10.1128/Aem.02993-10 |
0.38 |
|
| 2011 |
Brown SD, Gilmour CC, Kucken AM, Wall JD, Elias DA, Brandt CC, Podar M, Chertkov O, Held B, Bruce DC, Detter JC, Tapia R, Han CS, Goodwin LA, Cheng JF, et al. Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132. Journal of Bacteriology. 193: 2078-9. PMID 21357488 DOI: 10.1128/Jb.00170-11 |
0.366 |
|
| 2011 |
Vishnivetskaya TA, Mosher JJ, Palumbo AV, Yang ZK, Podar M, Brown SD, Brooks SC, Gu B, Southworth GR, Drake MM, Brandt CC, Elias DA. Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams. Applied and Environmental Microbiology. 77: 302-11. PMID 21057024 DOI: 10.1128/Aem.01715-10 |
0.349 |
|
| 2010 |
Mosher JJ, Drake MM, Carroll SL, Yang ZK, Schadt CW, Brown SD, Podar M, Hazen TC, Arkin AP, Phelps TJ, Palumbo AV, Faybishenko BA, Elias DA. Microbial Community Dynamics of Lactate Enriched Hanford Groundwaters Lawrence Berkeley National Laboratory. DOI: 10.2172/986244 |
0.332 |
|
| 2008 |
Elias DA, Tollaksen SL, Kennedy DW, Mottaz HM, Giometti CS, McLean JS, Hill EA, Pinchuk GE, Lipton MS, Fredrickson JK, Gorby YA. The influence of cultivation methods on Shewanella oneidensis physiology and proteome expression. Archives of Microbiology. 189: 313-24. PMID 18030449 DOI: 10.1007/S00203-007-0321-Y |
0.317 |
|
| 2007 |
Elias DA, Yang F, Mottaz HM, Beliaev AS, Lipton MS. Enrichment of functional redox reactive proteins and identification by mass spectrometry results in several terminal Fe(III)-reducing candidate proteins in Shewanella oneidensis MR-1. Journal of Microbiological Methods. 68: 367-75. PMID 17137661 DOI: 10.1016/J.Mimet.2006.09.023 |
0.342 |
|
| 2006 |
Lipton MS, Romine MF, Monroe ME, Elias DA, Pasa-Tolic L, Anderson GA, Anderson DJ, Fredrickson J, Hixson KK, Masselon C, Mottaz H, Tolic N, Smith RD. AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis. Methods of Biochemical Analysis. 49: 113-34. PMID 16929677 DOI: 10.1002/0471973165.Ch9 |
0.331 |
|
| 2006 |
Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, Chang IS, Kim BH, Kim KS, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, ... ... Elias DA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proceedings of the National Academy of Sciences of the United States of America. 103: 11358-63. PMID 16849424 DOI: 10.1073/Pnas.0604517103 |
0.325 |
|
| 2006 |
Shi L, Chen B, Wang Z, Elias DA, Mayer MU, Gorby YA, Ni S, Lower BH, Kennedy DW, Wunschel DS, Mottaz HM, Marshall MJ, Hill EA, Beliaev AS, Zachara JM, et al. Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1. Journal of Bacteriology. 188: 4705-14. PMID 16788180 DOI: 10.1128/Jb.01966-05 |
0.32 |
|
| 2005 |
Elias DA, Monroe ME, Marshall MJ, Romine MF, Belieav AS, Fredrickson JK, Anderson GA, Smith RD, Lipton MS. Global detection and characterization of hypothetical proteins in Shewanella oneidensis MR-1 using LC-MS based proteomics. Proteomics. 5: 3120-30. PMID 16038018 DOI: 10.1002/Pmic.200401140 |
0.333 |
|
| 2005 |
Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102 |
0.339 |
|
| 2004 |
Elias DA, Suflita JM, McInerney MJ, Krumholz LR. Periplasmic cytochrome c3 of Desulfovibrio vulgaris is directly involved in H2-mediated metal but not sulfate reduction. Applied and Environmental Microbiology. 70: 413-20. PMID 14711670 DOI: 10.1128/Aem.70.1.413-420.2004 |
0.555 |
|
| 2003 |
Elias DA, Krumholz LR, Wong D, Long PE, Suflita JM. Characterization of microbial activities and U reduction in a shallow aquifer contaminated by uranium mill tailings. Microbial Ecology. 46: 83-91. PMID 12754659 DOI: 10.1007/S00248-002-1060-X |
0.573 |
|
| 2003 |
Elias DA, Senko JM, Krumholz LR. A procedure for quantitation of total oxidized uranium for bioremediation studies. Journal of Microbiological Methods. 53: 343-53. PMID 12689712 DOI: 10.1016/S0167-7012(02)00252-X |
0.311 |
|
| 2003 |
Krumholz LR, Elias DA, Suflita JM. Immobilization of cobalt by sulfate-reducing bacteria in subsurface sediments Geomicrobiology Journal. 20: 61-72. DOI: 10.1080/01490450303892 |
0.552 |
|
| 1999 |
Elias DA, Krumholz LR, Tanner RS, Suflita JM. Estimation of methanogen biomass by quantitation of coenzyme M. Applied and Environmental Microbiology. 65: 5541-5. PMID 10584015 DOI: 10.1128/Aem.65.12.5541-5545.1999 |
0.56 |
|
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