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Thomas L. Poulos - Publications

Affiliations: 
University of California, Irvine, Irvine, CA 
Area:
Biochemistry
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309 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Li H, Hardy CD, Reidl CT, Jing Q, Xue F, Cinelli M, Silverman RB, Poulos TL. Crystallographic and Computational Insights into Isoform-Selective Dynamics in Nitric Oxide Synthase. Biochemistry. PMID 38417024 DOI: 10.1021/acs.biochem.3c00601  0.37
2023 Gable JA, Poulos TL, Follmer AH. Redox partner recognition and selectivity of cytochrome P450lin (CYP111A1). Journal of Inorganic Biochemistry. 244: 112212. PMID 37058990 DOI: 10.1016/j.jinorgbio.2023.112212  0.31
2023 Gable JA, Poulos TL, Follmer AH. Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450terp (CYP108A1). Journal of the American Chemical Society. PMID 36779970 DOI: 10.1021/jacs.2c12388  0.316
2022 Amaya JA, Lamb DC, Kelly SL, Caffrey P, Murarka VC, Poulos TL. Structural Analysis of P450 AmphL from S. nodosus Provides Insights into Substrate Selectivity of Polyene Macrolide Antibiotic Biosynthetic P450s. The Journal of Biological Chemistry. 101746. PMID 35189143 DOI: 10.1016/j.jbc.2022.101746  0.316
2021 Poulos TL, Follmer AH. Updating the Paradigm: Redox Partner Binding and Conformational Dynamics in Cytochromes P450. Accounts of Chemical Research. 55: 373-380. PMID 34965086 DOI: 10.1021/acs.accounts.1c00632  0.323
2021 Skinner SP, Follmer AH, Ubbink M, Poulos TL, Houwing-Duistermaat JJ, Paci E. Partial Opening of Cytochrome P450cam (CYP101A1) Is Driven by Allostery and Putidaredoxin Binding. Biochemistry. 60: 2932-2942. PMID 34519197 DOI: 10.1021/acs.biochem.1c00406  0.325
2020 Amaya JA, Batabyal D, Poulos TL. The Proton Relay Network in the Bacterial P450s: CYP101A1 and CYP101D1. Biochemistry. PMID 32574066 DOI: 10.1021/Acs.Biochem.0C00329  0.403
2020 Murarka VC, Batabyal D, Amaya JA, Sevrioukova IF, Poulos TL. Unexpected Differences between Two Closely Related Bacterial P450 Camphor Monooxygenases. Biochemistry. PMID 32551522 DOI: 10.1021/Acs.Biochem.0C00366  0.393
2020 Cinelli MA, Reidl CT, Li H, Chreifi G, Poulos TL, Silverman RB. First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. Journal of Medicinal Chemistry. PMID 32302123 DOI: 10.1021/Acs.Jmedchem.9B01573  0.399
2019 Chuo SW, Liou SH, Wang LP, Britt RD, Poulos TL, Sevrioukova I, Goodin DB. Conformational Response of N-Terminally Truncated Cytochrome P450 3A4 to Ligand Binding in Solution. Biochemistry. PMID 31456404 DOI: 10.1021/Acs.Biochem.9B00620  0.428
2019 Do HT, Li H, Chreifi G, Poulos TL, Silverman RB. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. Journal of Medicinal Chemistry. PMID 30802056 DOI: 10.2210/Pdb6Ngl/Pdb  0.37
2019 Follmer AH, Tripathi S, Poulos TL. Ligand and Redox Partner Binding Generates a New Conformational State in Cytochrome P450cam (CYP101A1). Journal of the American Chemical Society. PMID 30672701 DOI: 10.2210/Pdb6Nbl/Pdb  0.411
2018 Do HT, Wang HY, Li H, Chreifi G, Poulos TL, Silverman RB. Correction to Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. Journal of Medicinal Chemistry. PMID 30592215 DOI: 10.1021/Acs.Jmedchem.8B01866  0.332
2018 Follmer AH, Mahomed M, Goodin DB, Poulos TL. Substrate Dependent Allosteric Regulation in Cytochrome P450cam (CYP101A1). Journal of the American Chemical Society. PMID 30376314 DOI: 10.1021/Jacs.8B09441  0.35
2018 Li H, Evenson RJ, Chreifi G, Silverman RB, Poulos TL. The Structural Basis for Isoform Selective Nitric Oxide Synthase Inhibition by Thiophene-2-Carboximidamides. Biochemistry. PMID 30335983 DOI: 10.1021/Acs.Biochem.8B00895  0.422
2018 Lewis-Ballester A, Karkashon S, Batabyal D, Poulos TL, Yeh SR. Inhibition Mechanisms of Human Indoleamine 2,3 Dioxygenase 1. Journal of the American Chemical Society. PMID 29897749 DOI: 10.1021/Jacs.8B03691  0.416
2018 Tripathi S, Poulos TL. Testing the N-terminal Velcro Model of CooA Carbon Monoxide Activation. Biochemistry. PMID 29708736 DOI: 10.1021/Acs.Biochem.8B00359  0.413
2018 Batabyal D, Poulos TL. Effect of redox partner binding on CYP101D1 conformational dynamics. Journal of Inorganic Biochemistry. PMID 29550100 DOI: 10.1016/J.Jinorgbio.2018.02.013  0.421
2017 Lewis-Ballester A, Pham KN, Batabyal D, Karkashon S, Bonanno JB, Poulos TL, Yeh SR. Structural insights into substrate and inhibitor binding sites in human indoleamine 2,3-dioxygenase 1. Nature Communications. 8: 1693. PMID 29167421 DOI: 10.1038/S41467-017-01725-8  0.431
2017 Do HT, Wang HY, Li H, Chreifi G, Poulos TL, Silverman RB. Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. Journal of Medicinal Chemistry. PMID 29091437 DOI: 10.1021/Acs.Jmedchem.7B01356  0.386
2017 Guo Z, Sevrioukova IF, Denisov IG, Zhang X, Chiu TL, Thomas DG, Hanse EA, Cuellar RAD, Grinkova YV, Langenfeld VW, Swedien DS, Stamschror JD, Alvarez J, Luna F, Galván A, ... ... Poulos TL, et al. Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria. Cell Chemical Biology. 24: 1314. PMID 29053951 DOI: 10.1016/J.Chembiol.2017.09.012  0.32
2017 Benabbas A, Sun Y, Poulos TL, Champion PM. Ultrafast CO kinetics in heme proteins: adiabatic ligand binding and heavy atom tunneling. Journal of the American Chemical Society. PMID 28984134 DOI: 10.1021/Jacs.7B07507  0.366
2017 Guo Z, Sevrioukova IF, Denisov IG, Zhang X, Chiu TL, Thomas DG, Hanse EA, Cuellar RAD, Grinkova YV, Langenfeld VW, Swedien DS, Stamschror JD, Alvarez J, Luna F, Galván A, ... ... Poulos TL, et al. Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria. Cell Chemical Biology. PMID 28919040 DOI: 10.1016/J.Chembiol.2017.08.009  0.335
2017 Hollingsworth SA, Nguyen BD, Chreifi G, Arce AP, Poulos TL. Insights into the dynamics and dissociation mechanism of a protein redox complex using molecular dynamics. Journal of Chemical Information and Modeling. PMID 28841378 DOI: 10.1021/Acs.Jcim.7B00421  0.362
2017 Batabyal D, Richards LC, Poulos TL. The Effect of Redox Partner Binding on Cytochrome P450 Conformational Dynamics. Journal of the American Chemical Society. PMID 28823160 DOI: 10.1021/Jacs.7B07656  0.456
2017 Pensa AV, Cinelli MA, Li H, Chreifi G, Mukherjee P, Roman LJ, Martásek P, Poulos TL, Silverman RB. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. Journal of Medicinal Chemistry. PMID 28776992 DOI: 10.1021/Acs.Jmedchem.7B00835  0.407
2017 Meneghini LM, Tripathi S, Woodworth MA, Majumdar S, Poulos TL, Weiss GA. Dissecting binding of a β-barrel membrane protein by phage display. Molecular Biosystems. PMID 28627567 DOI: 10.1039/C7Mb00163K  0.381
2017 Chreifi G, Dejam D, Poulos TL. Crystal structure and functional analysis of Leishmania major pseudoperoxidase. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. PMID 28584975 DOI: 10.1007/S00775-017-1469-9  0.388
2017 Cinelli MA, Li H, Chreifi G, Poulos TL, Silverman RB. Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors. Journal of Medicinal Chemistry. PMID 28422508 DOI: 10.1021/Acs.Jmedchem.7B00259  0.407
2016 Sevrioukova IF, Poulos TL. Structural basis for regiospecific midazolam oxidation by human cytochrome P450 3A4. Proceedings of the National Academy of Sciences of the United States of America. PMID 28031486 DOI: 10.1073/Pnas.1616198114  0.442
2016 Poulos TL, Li H. Nitric oxide synthase and structure-based inhibitor design. Nitric Oxide : Biology and Chemistry. PMID 27890696 DOI: 10.1016/J.Niox.2016.11.004  0.412
2016 Batabyal D, Lewis-Ballester A, Yeh SR, Poulos TL. A Comparative Analysis on the Effector Role of Redox Partner Binding in Bacterial P450s. Biochemistry. PMID 27808504 DOI: 10.1021/Acs.Biochem.6B00913  0.425
2016 Holden JK, Lewis MC, Cinelli MA, Abdullatif Z, Pensa AV, Silverman RB, Poulos TL. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-based Inhibitors. Biochemistry. PMID 27607918 DOI: 10.1021/Acs.Biochem.6B00786  0.382
2016 Hollingsworth SA, Batabyal D, Nguyen BD, Poulos TL. Conformational selectivity in cytochrome P450 redox partner interactions. Proceedings of the National Academy of Sciences of the United States of America. PMID 27439869 DOI: 10.1073/Pnas.1606474113  0.467
2016 Li H, Wang HY, Kang S, Silverman RB, Poulos TL. Electrostatic control of isoform selective inhibitor binding in nitric oxide synthase. Biochemistry. PMID 27250740 DOI: 10.1021/Acs.Biochem.6B00261  0.459
2016 Wang HY, Qin Y, Li H, Roman LJ, Martásek P, Poulos TL, Silverman RB. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-based Scaffold with a Pyridine Linker. Journal of Medicinal Chemistry. PMID 27050842 DOI: 10.1021/Acs.Jmedchem.6B00273  0.385
2016 Cinelli MA, Li H, Pensa AV, Kang S, Roman LJ, Martásek P, Poulos TL, Silverman RB. Correction to Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. Journal of Medicinal Chemistry. PMID 26807481 DOI: 10.1021/Acs.Jmedchem.6B00036  0.351
2016 Chreifi G, Baxter EL, Doukov T, Cohen AE, McPhillips SE, Song J, Meharenna YT, Soltis SM, Poulos TL. Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer. Proceedings of the National Academy of Sciences of the United States of America. PMID 26787871 DOI: 10.1073/Pnas.1521664113  0.355
2016 Yang S, Yang Z, Silverman RB, Poulos T, Meyskens FL. Abstract 4744: Targeting nitric oxide signaling with nNOS inhibitors as a novel strategy for the therapy and prevention of human melanoma Cancer Research. 76: 4744-4744. DOI: 10.1158/1538-7445.Am2016-4744  0.303
2016 Poulos TL. Chapter 2: Cytochrome c peroxidase-cytochrome c complexes Rsc Metallobiology. 2016: 31-46. DOI: 10.1039/9781782622628-00031  0.349
2016 Hollingsworth SA, Fields JB, Chreifi G, Heyden M, Arce AP, Magaña-Garcia HI, Tobias DJ, Poulos TL. Association Mechanism of Leishmania major Peroxidase and cytochrome c revealed through Brownian and Molecular Dynamics Biophysical Journal. 110: 42a. DOI: 10.1016/J.Bpj.2015.11.295  0.387
2015 Fields JB, Hollingsworth SA, Chreifi G, Heyden M, Arce AP, Magana-Garcia HI, Poulos TL, Tobias DJ. "Bind and Crawl" Association Mechanism of Leishmania major Peroxidase and Cytochrome c Revealed by Brownian and Molecular Dynamics Simulations. Biochemistry. PMID 26598276 DOI: 10.1021/Acs.Biochem.5B00569  0.422
2015 Cinelli MA, Li H, Pensa AV, Kang S, Roman LJ, Martásek P, Poulos TL, Silverman RB. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. Journal of Medicinal Chemistry. PMID 26469213 DOI: 10.1021/Acs.Jmedchem.5B01330  0.428
2015 Hollingsworth SA, Holden JK, Li H, Poulos TL. Elucidating Nitric Oxide Synthase Domain Interactions by Molecular Dynamics. Protein Science : a Publication of the Protein Society. PMID 26448477 DOI: 10.1002/Pro.2824  0.417
2015 Kaur P, Chamberlin R, Poulos TL, Sevrioukova IF. Structure-based inhibitor design for evaluation of a CYP3A4 pharmacophore model. Journal of Medicinal Chemistry. PMID 26371436 DOI: 10.1021/Acs.Jmedchem.5B01146  0.424
2015 Kang S, Li H, Tang W, Martásek P, Roman LJ, Poulos TL, Silverman RB. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. Journal of Medicinal Chemistry. PMID 26120733 DOI: 10.1021/Acs.Jmedchem.5B00573  0.414
2015 Holden JK, Kang S, Beasley FC, Cinelli MA, Li H, Roy SG, Dejam D, Edinger AL, Nizet V, Silverman RB, Poulos TL. Nitric Oxide Synthase as a Target for Methicillin-Resistant Staphylococcus aureus. Chemistry & Biology. 22: 785-92. PMID 26091171 DOI: 10.1016/J.Chembiol.2015.05.013  0.373
2015 Sevrioukova IF, Poulos TL. Anion-Dependent Stimulation of CYP3A4 Monooxygenase. Biochemistry. 54: 4083-96. PMID 26066995 DOI: 10.1021/Acs.Biochem.5B00510  0.446
2015 Holden JK, Dejam D, Lewis MC, Huang H, Kang S, Jing Q, Xue F, Silverman RB, Poulos TL. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry. 54: 4075-82. PMID 26062720 DOI: 10.1021/Acs.Biochem.5B00431  0.445
2015 Astashkin AV, Chen L, Elmore BO, Kunwar D, Miao Y, Li H, Poulos TL, Roman LJ, Feng C. Probing the Hydrogen Bonding of the Ferrous-NO Heme Center of nNOS by Pulsed Electron Paramagnetic Resonance. The Journal of Physical Chemistry. A. 119: 6641-9. PMID 26035438 DOI: 10.1021/Acs.Jpca.5B01804  0.399
2015 Sevrioukova IF, Poulos TL. Current Approaches for Investigating and Predicting Cytochrome P450 3A4-Ligand Interactions. Advances in Experimental Medicine and Biology. 851: 83-105. PMID 26002732 DOI: 10.1007/978-3-319-16009-2_3  0.336
2015 Chreifi G, Hollingsworth SA, Li H, Tripathi S, Arce AP, Magaña-Garcia HI, Poulos TL. Enzymatic Mechanism of Leishmania major Peroxidase and the Critical Role of Specific Ionic Interactions. Biochemistry. 54: 3328-36. PMID 25941976 DOI: 10.1021/Acs.Biochem.5B00338  0.39
2015 Tang W, Li H, Doud EH, Chen Y, Choing S, Plaza C, Kelleher NL, Poulos TL, Silverman RB. Mechanism of Inactivation of Neuronal Nitric Oxide Synthase by (S)-2-Amino-5-(2-(methylthio)acetimidamido)pentanoic Acid. Journal of the American Chemical Society. 137: 5980-9. PMID 25874809 DOI: 10.1021/Jacs.5B01202  0.405
2015 Tang W, Li H, Poulos TL, Silverman RB. Mechanistic studies of inactivation of inducible nitric oxide synthase by amidines. Biochemistry. 54: 2530-8. PMID 25811913 DOI: 10.1021/Acs.Biochem.5B00135  0.384
2015 Kaluka D, Batabyal D, Chiang BY, Poulos TL, Yeh SR. Spectroscopic and mutagenesis studies of human PGRMC1. Biochemistry. 54: 1638-47. PMID 25675345 DOI: 10.1021/Bi501177E  0.421
2015 Holden JK, Kang S, Hollingsworth SA, Li H, Lim N, Chen S, Huang H, Xue F, Tang W, Silverman RB, Poulos TL. Structure-based design of bacterial nitric oxide synthase inhibitors. Journal of Medicinal Chemistry. 58: 994-1004. PMID 25522110 DOI: 10.1021/Jm501723P  0.451
2015 Mukherjee P, Li H, Sevrioukova I, Chreifi G, Martásek P, Roman LJ, Poulos TL, Silverman RB. Novel 2,4-disubstituted pyrimidines as potent, selective, and cell-permeable inhibitors of neuronal nitric oxide synthase. Journal of Medicinal Chemistry. 58: 1067-88. PMID 25489882 DOI: 10.1021/Jm501719E  0.423
2015 Hollingsworth SA, Poulos TL. Molecular dynamics of the P450cam-Pdx complex reveals complex stability and novel interface contacts. Protein Science : a Publication of the Protein Society. 24: 49-57. PMID 25307478 DOI: 10.1002/Pro.2583  0.397
2014 Li H, Jamal J, Plaza C, Pineda SH, Chreifi G, Jing Q, Cinelli MA, Silverman RB, Poulos TL. Structures of human constitutive nitric oxide synthases. Acta Crystallographica. Section D, Biological Crystallography. 70: 2667-74. PMID 25286850 DOI: 10.1107/S1399004714017064  0.448
2014 Holden JK, Lim N, Poulos TL. Identification of redox partners and development of a novel chimeric bacterial nitric oxide synthase for structure activity analyses. The Journal of Biological Chemistry. 289: 29437-45. PMID 25194416 DOI: 10.1074/Jbc.M114.595165  0.494
2014 Jing Q, Li H, Roman LJ, Martásek P, Poulos TL, Silverman RB. Combination of chiral linkers with thiophenecarboximidamide heads to improve the selectivity of inhibitors of neuronal nitric oxide synthase. Bioorganic & Medicinal Chemistry Letters. 24: 4504-10. PMID 25149509 DOI: 10.1016/J.Bmcl.2014.07.079  0.414
2014 Li H, Jamal J, Delker S, Plaza C, Ji H, Jing Q, Huang H, Kang S, Silverman RB, Poulos TL. The mobility of a conserved tyrosine residue controls isoform-dependent enzyme-inhibitor interactions in nitric oxide synthases. Biochemistry. 53: 5272-9. PMID 25089924 DOI: 10.1021/Bi500561H  0.81
2014 Astashkin AV, Chen L, Zhou X, Li H, Poulos TL, Liu KJ, Guillemette JG, Feng C. Pulsed electron paramagnetic resonance study of domain docking in neuronal nitric oxide synthase: the calmodulin and output state perspective. The Journal of Physical Chemistry. A. 118: 6864-72. PMID 25046446 DOI: 10.1021/Jp503547W  0.374
2014 Chreifi G, Li H, McInnes CR, Gibson CL, Suckling CJ, Poulos TL. Communication between the zinc and tetrahydrobiopterin binding sites in nitric oxide synthase. Biochemistry. 53: 4216-23. PMID 24819538 DOI: 10.1021/Bi5003986  0.458
2014 Sevrioukova IF, Poulos TL. Ritonavir analogues as a probe for deciphering the cytochrome P450 3A4 inhibitory mechanism. Current Topics in Medicinal Chemistry. 14: 1348-55. PMID 24805065 DOI: 10.2174/1568026614666140506120647  0.384
2014 Kang S, Tang W, Li H, Chreifi G, Martásek P, Roman LJ, Poulos TL, Silverman RB. Nitric oxide synthase inhibitors that interact with both heme propionate and tetrahydrobiopterin show high isoform selectivity Journal of Medicinal Chemistry. 57: 4382-4396. PMID 24758147 DOI: 10.1021/Jm5004182  0.46
2014 Jing Q, Li H, Roman LJ, Martásek P, Poulos TL, Silverman RB. An Accessible Chiral Linker to Enhance Potency and Selectivity of Neuronal Nitric Oxide Synthase Inhibitors. Acs Medicinal Chemistry Letters. 5: 56-60. PMID 24660051 DOI: 10.1021/Ml400381S  0.439
2014 Madrona Y, Hollingsworth SA, Tripathi S, Fields JB, Rwigema JC, Tobias DJ, Poulos TL. Crystal structure of cindoxin, the P450cin redox partner. Biochemistry. 53: 1435-46. PMID 24533927 DOI: 10.1021/Bi500010M  0.475
2014 Cinelli MA, Li H, Chreifi G, Martásek P, Roman LJ, Poulos TL, Silverman RB. Simplified 2-aminoquinoline-based scaffold for potent and selective neuronal nitric oxide synthase inhibition Journal of Medicinal Chemistry. 57: 1513-1530. PMID 24472039 DOI: 10.1021/Jm401838X  0.406
2014 Huang H, Li H, Yang S, Chreifi G, Martásek P, Roman LJ, Meyskens FL, Poulos TL, Silverman RB. Potent and selective double-headed thiophene-2-carboximidamide inhibitors of neuronal nitric oxide synthase for the treatment of melanoma Journal of Medicinal Chemistry. 57: 686-700. PMID 24447275 DOI: 10.1021/Jm401252E  0.382
2014 Poulos TL. Heme enzyme structure and function. Chemical Reviews. 114: 3919-62. PMID 24400737 DOI: 10.1021/Cr400415K  0.427
2013 Batabyal D, Poulos TL. Crystal structures and functional characterization of wild-type CYP101D1 and its active site mutants. Biochemistry. 52: 8898-906. PMID 24261604 DOI: 10.1021/Bi401330C  0.424
2013 Holden JK, Li H, Jing Q, Kang S, Richo J, Silverman RB, Poulos TL. Structural and biological studies on bacterial nitric oxide synthase inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 110: 18127-31. PMID 24145412 DOI: 10.1073/Pnas.1314080110  0.4
2013 Jing Q, Li H, Chreifi G, Roman LJ, Martásek P, Poulos TL, Silverman RB. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorganic & Medicinal Chemistry Letters. 23: 5674-9. PMID 23993333 DOI: 10.1016/J.Bmcl.2013.08.034  0.43
2013 Tripathi S, O'Neill MJ, Wilks A, Poulos TL. Crystal structure of the Pseudomonas aeruginosa cytoplasmic heme binding protein, Apo-PhuS. Journal of Inorganic Biochemistry. 128: 131-6. PMID 23973453 DOI: 10.1016/J.Jinorgbio.2013.07.030  0.391
2013 Jing Q, Li H, Fang J, Roman LJ, Martásek P, Poulos TL, Silverman RB. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorganic & Medicinal Chemistry. 21: 5323-31. PMID 23867386 DOI: 10.1016/J.Bmc.2013.06.014  0.414
2013 Batabyal D, Li H, Poulos TL. Synergistic effects of mutations in cytochrome P450cam designed to mimic CYP101D1. Biochemistry. 52: 5396-402. PMID 23865948 DOI: 10.1021/Bi400676D  0.417
2013 Madrona Y, Hollingsworth SA, Khan B, Poulos TL. P450cin active site water: implications for substrate binding and solvent accessibility. Biochemistry. 52: 5039-50. PMID 23829586 DOI: 10.1021/Bi4006946  0.424
2013 Sevrioukova IF, Poulos TL. Dissecting cytochrome P450 3A4-ligand interactions using ritonavir analogues. Biochemistry. 52: 4474-81. PMID 23746300 DOI: 10.1021/Bi4005396  0.455
2013 Tripathi S, Li H, Poulos TL. Structural basis for effector control and redox partner recognition in cytochrome P450. Science (New York, N.Y.). 340: 1227-30. PMID 23744947 DOI: 10.1126/Science.1235797  0.434
2013 Poulos TL, Madrona Y. Oxygen activation and redox partner binding in cytochromes P450. Biotechnology and Applied Biochemistry. 60: 128-33. PMID 23587000 DOI: 10.1002/Bab.1056  0.473
2013 Labby KJ, Li H, Roman LJ, Martásek P, Poulos TL, Silverman RB. Methylated Nω-hydroxy-l-arginine analogues as mechanistic probes for the second step of the nitric oxide synthase-catalyzed reaction Biochemistry. 52: 3062-3073. PMID 23586781 DOI: 10.1021/Bi301571V  0.407
2013 Sevrioukova IF, Poulos TL. Pyridine-substituted desoxyritonavir is a more potent inhibitor of cytochrome P450 3A4 than ritonavir. Journal of Medicinal Chemistry. 56: 3733-41. PMID 23586711 DOI: 10.1021/Jm400288Z  0.404
2013 Li H, Jamal J, Chreifi G, Venkatesh V, Abou-Ziab H, Poulos TL. Dissecting the kinetics of the NADP(+)-FADH2 charge transfer complex and flavin semiquinones in neuronal nitric oxide synthase. Journal of Inorganic Biochemistry. 124: 1-10. PMID 23567464 DOI: 10.1016/J.Jinorgbio.2013.03.008  0.312
2013 Li H, Li C, Zhou S, Poulos TL, Gershon PD. Domain-level rocking motion within a polymerase that translocates on single-stranded nucleic acid. Acta Crystallographica. Section D, Biological Crystallography. 69: 617-24. PMID 23519670 DOI: 10.1107/S0907444913000346  0.364
2013 Huang H, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Structure-guided design of selective inhibitors of neuronal nitric oxide synthase Journal of Medicinal Chemistry. 56: 3024-3032. PMID 23451760 DOI: 10.1021/Jm4000984  0.451
2013 Li H, Xue F, Kraus JM, Ji H, Labby KJ, Mataka J, Delker SL, Martásek P, Roman LJ, Poulos TL, Silverman RB. Cyclopropyl- and methyl-containing inhibitors of neuronal nitric oxide synthase Bioorganic and Medicinal Chemistry. 21: 1333-1343. PMID 23352768 DOI: 10.1016/J.Bmc.2012.12.019  0.789
2013 Yang Z, Misner B, Ji H, Poulos TL, Silverman RB, Meyskens FL, Yang S. Targeting nitric oxide signaling with nNOS inhibitors as a novel strategy for the therapy and prevention of human melanoma Antioxidants and Redox Signaling. 19: 433-447. PMID 23199242 DOI: 10.1089/Ars.2012.4563  0.322
2013 Salerno JC, Ray K, Poulos T, Li H, Ghosh DK. Calmodulin activates neuronal nitric oxide synthase by enabling transitions between conformational states. Febs Letters. 587: 44-7. PMID 23159936 DOI: 10.1016/J.Febslet.2012.10.039  0.341
2013 Poulos TL, Li H. Structural basis for isoform-selective inhibition in nitric oxide synthase. Accounts of Chemical Research. 46: 390-8. PMID 23030042 DOI: 10.1021/Ar300175N  0.494
2013 Sevrioukova IF, Poulos TL. Understanding the mechanism of cytochrome P450 3A4: recent advances and remaining problems. Dalton Transactions (Cambridge, England : 2003). 42: 3116-26. PMID 23018626 DOI: 10.1039/C2Dt31833D  0.318
2013 Batabyal D, Poulos TL. Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of CYP101D1 Biochemistry. 52: 8898. DOI: 10.2210/Pdb4C9P/Pdb  0.489
2013 Doukov T, Li H, Sharma A, Martell JD, Soltis SM, Silverman RB, Poulos TL. Correction to “Temperature-Dependent Spin Crossover in Neuronal Nitric Oxide Synthase Bound with the Heme-Coordinating Thioether Inhibitors” Journal of the American Chemical Society. 135: 7080-7080. DOI: 10.1021/Ja3105472  0.311
2012 Jasion VS, Doukov T, Pineda SH, Li H, Poulos TL. Crystal structure of the Leishmania major peroxidase-cytochrome c complex. Proceedings of the National Academy of Sciences of the United States of America. 109: 18390-4. PMID 23100535 DOI: 10.1073/Pnas.1213295109  0.807
2012 Jensen LM, Meharenna YT, Davidson VL, Poulos TL, Hedman B, Wilmot CM, Sarangi R. Geometric and electronic structures of the His-Fe(IV)=O and His-Fe(IV)-Tyr hemes of MauG. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 17: 1241-55. PMID 23053529 DOI: 10.1007/S00775-012-0939-3  0.337
2012 Madrona Y, Tripathi S, Li H, Poulos TL. Crystal structures of substrate-free and nitrosyl cytochrome P450cin: implications for O(2) activation. Biochemistry. 51: 6623-31. PMID 22775403 DOI: 10.1021/Bi300666U  0.408
2012 Huang H, Ji H, Li H, Jing Q, Labby KJ, Martásek P, Roman LJ, Poulos TL, Silverman RB. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. Journal of the American Chemical Society. 134: 11559-72. PMID 22731813 DOI: 10.1021/Ja302269R  0.441
2012 Benabbas A, Karunakaran V, Youn H, Poulos TL, Champion PM. Effect of DNA binding on geminate CO recombination kinetics in CO-sensing transcription factor CooA. The Journal of Biological Chemistry. 287: 21729-40. PMID 22544803 DOI: 10.1074/Jbc.M112.345090  0.39
2012 Sevrioukova IF, Poulos TL. Interaction of human cytochrome P4503A4 with ritonavir analogs. Archives of Biochemistry and Biophysics. 520: 108-16. PMID 22410611 DOI: 10.1016/J.Abb.2012.02.018  0.41
2012 Jasion VS, Poulos TL. Leishmania major peroxidase is a cytochrome c peroxidase. Biochemistry. 51: 2453-60. PMID 22372542 DOI: 10.1021/Bi300169X  0.796
2012 Labby KJ, Xue F, Kraus JM, Ji H, Mataka J, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Intramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase Bioorganic and Medicinal Chemistry. 20: 2435-2443. PMID 22370337 DOI: 10.1016/J.Bmc.2012.01.037  0.394
2012 Sevrioukova IF, Poulos TL. Structural and mechanistic insights into the interaction of cytochrome P4503A4 with bromoergocryptine, a type I ligand. The Journal of Biological Chemistry. 287: 3510-7. PMID 22157006 DOI: 10.1074/Jbc.M111.317081  0.462
2011 Xue F, Kraus JM, Labby KJ, Ji H, Mataka J, Xia G, Li H, Delker SL, Roman LJ, Martásek P, Poulos TL, Silverman RB. Improved synthesis of chiral pyrrolidine inhibitors and their binding properties to neuronal nitric oxide synthase Journal of Medicinal Chemistry. 54: 6399-6403. PMID 21809851 DOI: 10.1021/Jm200411J  0.793
2011 Jasion VS, Polanco JA, Meharenna YT, Li H, Poulos TL. Crystal structure of Leishmania major peroxidase and characterization of the compound i tryptophan radical. The Journal of Biological Chemistry. 286: 24608-15. PMID 21566139 DOI: 10.1074/Jbc.M111.230524  0.808
2011 Doukov T, Li H, Sharma A, Martell JD, Soltis SM, Silverman RB, Poulos TL. Temperature-dependent spin crossover in neuronal nitric oxide synthase bound with the heme-coordinating thioether inhibitors. Journal of the American Chemical Society. 133: 8326-34. PMID 21534614 DOI: 10.1021/Ja201466V  0.368
2011 Xue F, Fang J, Delker SL, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Symmetric double-headed aminopyridines, a novel strategy for potent and membrane-permeable inhibitors of neuronal nitric oxide synthase Journal of Medicinal Chemistry. 54: 2039-2048. PMID 21410186 DOI: 10.1021/Jm101071N  0.791
2011 Sevrioukova IF, Poulos TL. Structural biology of redox partner interactions in P450cam monooxygenase: a fresh look at an old system. Archives of Biochemistry and Biophysics. 507: 66-74. PMID 20816746 DOI: 10.1016/J.Abb.2010.08.022  0.459
2011 Meyskens FL, Yang S, Yang Z, Ji H, Poulos Tl, Silverman RB. Neuronal Nitric Oxide Synthase (nNOS)/NO, An Accelerator of Melanoma Progression, is a Potential Target for Chemoprevention Free Radical Biology and Medicine. 51: S91-S92. DOI: 10.1016/J.Freeradbiomed.2011.10.416  0.371
2010 Delker SL, Xue F, Li H, Jamal J, Silverman RB, Poulos TL. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase Biochemistry. 49: 10803-10810. PMID 21138269 DOI: 10.1021/Bi1013479  0.809
2010 Ji H, Delker SL, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Exploration of the active site of neuronal nitric oxide synthase by the design and synthesis of pyrrolidinomethyl 2-aminopyridine derivatives Journal of Medicinal Chemistry. 53: 7804-7824. PMID 20958055 DOI: 10.1021/Jm100947X  0.788
2010 Sevrioukova IF, Poulos TL. Structure and mechanism of the complex between cytochrome P4503A4 and ritonavir. Proceedings of the National Academy of Sciences of the United States of America. 107: 18422-7. PMID 20937904 DOI: 10.1073/Pnas.1010693107  0.39
2010 Xue F, Li H, Delker SL, Fang J, Martásek P, Roman LJ, Poulos TL, Silverman RB. Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase Journal of the American Chemical Society. 132: 14229-14238. PMID 20843082 DOI: 10.1021/Ja106175Q  0.771
2010 Xue F, Li H, Fang J, Roman LJ, Martásek P, Poulos TL, Silverman RB. Peripheral but crucial: A hydrophobic pocket (Tyr706, Leu 337, and Met336) for potent and selective inhibition of neuronal nitric oxide synthase Bioorganic and Medicinal Chemistry Letters. 20: 6258-6261. PMID 20833542 DOI: 10.1016/J.Bmcl.2010.08.096  0.449
2010 Xue F, Huang J, Ji H, Fang J, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Structure-based design, synthesis, and biological evaluation of lipophilic-tailed monocationic inhibitors of neuronal nitric oxide synthase Bioorganic and Medicinal Chemistry. 18: 6526-6537. PMID 20673724 DOI: 10.1016/J.Bmc.2010.06.074  0.441
2010 Meharenna YT, Poulos TL. Using molecular dynamics to probe the structural basis for enhanced stability in thermal stable cytochromes P450. Biochemistry. 49: 6680-6. PMID 20593793 DOI: 10.1021/Bi100929X  0.357
2010 Sevrioukova IF, Poulos TL. Arginines 65 and 310 in putidaredoxin reductase are critical for interaction with putidaredoxin. Biochemistry. 49: 5160-6. PMID 20524621 DOI: 10.1021/Bi100626F  0.403
2010 Sundaramoorthy M, Gold MH, Poulos TL. Ultrahigh (0.93A) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: implications for the catalytic mechanism. Journal of Inorganic Biochemistry. 104: 683-90. PMID 20356630 DOI: 10.1016/J.Jinorgbio.2010.02.011  0.426
2010 Delker SL, Ji H, Li H, Jamal J, Fang J, Xue F, Silverman RB, Poulos TL. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model Journal of the American Chemical Society. 132: 5437-5442. PMID 20337441 DOI: 10.1021/Ja910228A  0.79
2010 Meharenna YT, Doukov T, Li H, Soltis SM, Poulos TL. Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry. 49: 2984-6. PMID 20230048 DOI: 10.1021/Bi100238R  0.318
2010 Poulos TL. Thirty years of heme peroxidase structural biology. Archives of Biochemistry and Biophysics. 500: 3-12. PMID 20206121 DOI: 10.1016/J.Abb.2010.02.008  0.37
2010 Sevrioukova IF, Poulos TL, Churbanova IY. Crystal structure of the putidaredoxin reductase x putidaredoxin electron transfer complex. The Journal of Biological Chemistry. 285: 13616-20. PMID 20179327 DOI: 10.1074/Jbc.M110.104968  0.378
2010 Martell JD, Li H, Doukov T, Martásek P, Roman LJ, Soltis M, Poulos TL, Silverman RB. Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency. Journal of the American Chemical Society. 132: 798-806. PMID 20014790 DOI: 10.1021/Ja908544F  0.47
2010 Churbanova IY, Poulos TL, Sevrioukova IF. Production and characterization of a functional putidaredoxin reductase-putidaredoxin covalent complex. Biochemistry. 49: 58-67. PMID 19954240 DOI: 10.1021/Bi901872S  0.382
2010 Delker SL, Ji H, Li H, Jamal J, Fang J, Xue F, Silverman RB, Poulos TL. Unexpected Binding Modes of Nitric Oxide Synthase Inhibitors Effective in the Prevention of a Cerebral Palsy Phenotype in an Animal Model Journal of the American Chemical Society. 132: 14688-14688. DOI: 10.1021/Ja107808U  0.767
2009 Doukov T, Li H, Soltis M, Poulos TL. Single crystal structural and absorption spectral characterizations of nitric oxide synthase complexed with N(omega)-hydroxy-L-arginine and diatomic ligands. Biochemistry. 48: 10246-54. PMID 19791770 DOI: 10.1021/Bi9009743  0.396
2009 Ioanoviciu A, Meharenna YT, Poulos TL, Ortiz de Montellano PR. DevS oxy complex stability identifies this heme protein as a gas sensor in Mycobacterium tuberculosis dormancy. Biochemistry. 48: 5839-48. PMID 19463006 DOI: 10.1021/Bi802309Y  0.343
2009 Li C, Li H, Zhou S, Sun E, Yoshizawa J, Poulos TL, Gershon PD. Polymerase translocation with respect to single-stranded nucleic acid: looping or wrapping of primer around a poly(A) polymerase. Structure (London, England : 1993). 17: 680-9. PMID 19446524 DOI: 10.1016/J.Str.2009.03.012  0.391
2009 Kumar MR, Pervitsky D, Chen L, Poulos T, Kundu S, Hargrove MS, Rivera EJ, Diaz A, Colón JL, Farmer PJ. Nitrosyl hydride (HNO) as an O2 analogue: long-lived HNO adducts of ferrous globins. Biochemistry. 48: 5018-25. PMID 19368336 DOI: 10.1021/Bi900122R  0.406
2009 Igarashi J, Li H, Jamal J, Ji H, Fang J, Lawton GR, Silverman RB, Poulos TL. Crystal structures of constitutive nitric oxide synthases in complex with de novo designed inhibitors. Journal of Medicinal Chemistry. 52: 2060-6. PMID 19296678 DOI: 10.1021/Jm900007A  0.451
2009 Ji H, Tan S, Igarashi J, Li H, Derrick M, Martásek P, Roman LJ, Vásquez-Vivar J, Poulos TL, Silverman RB. Selective neuronal nitric oxide synthase inhibitors and the prevention of cerebral palsy. Annals of Neurology. 65: 209-17. PMID 19235180 DOI: 10.1002/Ana.21555  0.336
2009 Ji H, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Discovery of highly potent and selective inhibitors of neuronal nitric oxide synthase by fragment hopping. Journal of Medicinal Chemistry. 52: 779-97. PMID 19125620 DOI: 10.1021/Jm801220A  0.415
2008 Li H, Das A, Sibhatu H, Jamal J, Sligar SG, Poulos TL. Exploring the electron transfer properties of neuronal nitric-oxide synthase by reversal of the FMN redox potential. The Journal of Biological Chemistry. 283: 34762-72. PMID 18852262 DOI: 10.1074/Jbc.M806949200  0.467
2008 Meharenna YT, Oertel P, Bhaskar B, Poulos TL. Engineering ascorbate peroxidase activity into cytochrome c peroxidase. Biochemistry. 47: 10324-32. PMID 18771292 DOI: 10.1021/Bi8007565  0.81
2008 Fasan R, Meharenna YT, Snow CD, Poulos TL, Arnold FH. Evolutionary history of a specialized p450 propane monooxygenase. Journal of Molecular Biology. 383: 1069-80. PMID 18619466 DOI: 10.1016/J.Jmb.2008.06.060  0.419
2008 Gruia F, Ionascu D, Kubo M, Ye X, Dawson J, Osborne RL, Sligar SG, Denisov I, Das A, Poulos TL, Terner J, Champion PM. Low-frequency dynamics of Caldariomyces fumago chloroperoxidase probed by femtosecond coherence spectroscopy. Biochemistry. 47: 5156-67. PMID 18407660 DOI: 10.1021/Bi7025485  0.311
2008 Ji H, Stanton BZ, Igarashi J, Li H, Martásek P, Roman LJ, Poulos TL, Silverman RB. Minimal pharmacophoric elements and fragment hopping, an approach directed at molecular diversity and isozyme selectivity. Design of selective neuronal nitric oxide synthase inhibitors. Journal of the American Chemical Society. 130: 3900-14. PMID 18321097 DOI: 10.1021/Ja0772041  0.381
2008 Meharenna YT, Slessor KE, Cavaignac SM, Poulos TL, De Voss JJ. The critical role of substrate-protein hydrogen bonding in the control of regioselective hydroxylation in p450cin. The Journal of Biological Chemistry. 283: 10804-12. PMID 18270198 DOI: 10.1074/Jbc.M709722200  0.436
2008 Ho WW, Li H, Nishida CR, Ortiz De Montellano PR, Poulos TL. Crystal structure and properties of CYP231A2 from the thermoacidophilic archaeon Picrophilus torridus Biochemistry. 47: 2071-2079. PMID 18197710 DOI: 10.1021/Bi702240K  0.748
2008 Ji H, Igarashi J, Li H, Martásek P, Roman LJ, Vivar JV, Derrick M, Poulos TL, Tan S, Silverman RB. O69. Prevention of cerebral palsy with de novo designed neuronal nitric oxide synthase selective inhibitors Nitric Oxide. 19: 36. DOI: 10.1016/J.Niox.2008.06.070  0.32
2007 Ho WW, Li H, Eakanunkul S, Tong Y, Wilks A, Guo M, Poulos TL. Holo- and apo-bound structures of bacterial periplasmic heme-binding proteins. The Journal of Biological Chemistry. 282: 35796-802. PMID 17925389 DOI: 10.1074/Jbc.M706761200  0.759
2007 Poulos TL. Structural biology of p450-oxy complexes. Drug Metabolism Reviews. 39: 557-66. PMID 17786638 DOI: 10.1080/03602530701498240  0.314
2007 Ibrahim M, Kuchinskas M, Youn H, Kerby RL, Roberts GP, Poulos TL, Spiro TG. Mechanism of the CO-sensing heme protein CooA: New insights from the truncated heme domain and UVRR spectroscopy Journal of Inorganic Biochemistry. 101: 1776-1785. PMID 17720248 DOI: 10.1016/J.Jinorgbio.2007.07.010  0.792
2007 Corbett MC, Latimer MJ, Poulos TL, Sevrioukova IF, Hodgson KO, Hedman B. Photoreduction of the active site of the metalloprotein putidaredoxin by synchrotron radiation. Acta Crystallographica. Section D, Biological Crystallography. 63: 951-60. PMID 17704563 DOI: 10.1107/S0907444907035160  0.318
2007 Kimmich N, Das A, Sevrioukova I, Meharenna Y, Sligar SG, Poulos TL. Electron transfer between cytochrome P450cin and its FMN-containing redox partner, cindoxin. The Journal of Biological Chemistry. 282: 27006-11. PMID 17606612 DOI: 10.1074/Jbc.M703790200  0.773
2007 Levin AM, Murase K, Jackson PJ, Flinspach ML, Poulos TL, Weiss GA. Double barrel shotgun scanning of the caveolin-1 scaffolding domain. Acs Chemical Biology. 2: 493-500. PMID 17602618 DOI: 10.1021/Cb700055T  0.805
2007 Poulos TL. The Janus nature of heme. Natural Product Reports. 24: 504-10. PMID 17534526 DOI: 10.1039/B604195G  0.323
2007 Seo J, Igarashi J, Li H, Martasek P, Roman LJ, Poulos TL, Silverman RB. Structure-based design and synthesis of N(omega)-nitro-L-arginine-containing peptidomimetics as selective inhibitors of neuronal nitric oxide synthase. Displacement of the heme structural water. Journal of Medicinal Chemistry. 50: 2089-99. PMID 17425297 DOI: 10.1021/Jm061305C  0.438
2007 Borjigin M, Li H, Lanz ND, Kerby RL, Roberts GP, Poulos TL. Structure-based hypothesis on the activation of the CO-sensing transcription factor CooA. Acta Crystallographica. Section D, Biological Crystallography. 63: 282-7. PMID 17327664 DOI: 10.1107/S0907444906051638  0.409
2007 Friedman J, Meharenna YT, Wilks A, Poulos TL. Diatomic ligand discrimination by the heme oxygenases from Neisseria meningitidis and Pseudomonas aeruginosa. The Journal of Biological Chemistry. 282: 1066-71. PMID 17095508 DOI: 10.1074/Jbc.M609112200  0.408
2006 Poulos TL. Soluble guanylate cyclase. Current Opinion in Structural Biology. 16: 736-43. PMID 17015012 DOI: 10.1016/J.Sbi.2006.09.006  0.428
2006 Kuznetsov VY, Poulos TL, Sevrioukova IF. Putidaredoxin-to-cytochrome P450cam electron transfer: differences between the two reductive steps required for catalysis. Biochemistry. 45: 11934-44. PMID 17002293 DOI: 10.1021/Bi0611154  0.397
2006 Li H, Igarashi J, Jamal J, Yang W, Poulos TL. Structural studies of constitutive nitric oxide synthases with diatomic ligands bound. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 11: 753-68. PMID 16804678 DOI: 10.1007/S00775-006-0123-8  0.486
2006 Kuchinskas M, Li H, Conrad M, Roberts G, Poulos TL. The role of the DNA-binding domains in CooA activation. Biochemistry. 45: 7148-53. PMID 16752905 DOI: 10.1021/Bi052609O  0.795
2006 Swartz L, Kuchinskas M, Li H, Poulos TL, Lanzilotta WN. Redox-dependent structural changes in the Azotobacter vinelandii bacterioferritin: new insights into the ferroxidase and iron transport mechanism. Biochemistry. 45: 4421-8. PMID 16584178 DOI: 10.1021/Bi060146W  0.382
2006 Mbadugha BN, Seo J, Ji H, Martásek P, Roman LJ, Shea TM, Li H, Poulos TL, Silverman RB. Hydroxyl-terminated peptidomimetic inhibitors of neuronal nitric oxide synthase. Bioorganic & Medicinal Chemistry. 14: 3681-90. PMID 16480878 DOI: 10.1016/J.Bmc.2006.01.044  0.434
2006 Igarashi J, Li H, Flinspach III ML, Jamal J, Yang W, Gomez-Vidal JA, Litzinger EA, Huang H, Silverman RB, Poulos TL. 1P157 Exploring the Binding Conformations of Bulkier Dipeptide Amide Inhibitors in Constitutive Nitric Oxide Synthases(5. Heme protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46: S186. DOI: 10.2142/Biophys.46.S186_1  0.417
2006 Li H, Igarashi J, Jamal J, Yang W, Poulos TL. P179. The role of the active site water molecule in proton shuttling revealed by structures of nNOS with l-arginine and NO bound Nitric Oxide. 14: 75. DOI: 10.1016/J.Niox.2006.04.249  0.366
2005 Li H, Flinspach ML, Igarashi J, Jamal J, Yang W, Gómez-Vidal JA, Litzinger EA, Huang H, Erdal EP, Silverman RB, Poulos TL. Exploring the binding conformations of bulkier dipeptide amide inhibitors in constitutive nitric oxide synthases. Biochemistry. 44: 15222-9. PMID 16285725 DOI: 10.1021/Bi0513610  0.831
2005 Barrows TP, Poulos TL. Role of electrostatics and salt bridges in stabilizing the compound I radical in ascorbate peroxidase. Biochemistry. 44: 14062-8. PMID 16245922 DOI: 10.1021/Bi0507128  0.797
2005 Poulos TL. Structural biology of heme monooxygenases. Biochemical and Biophysical Research Communications. 338: 337-45. PMID 16185651 DOI: 10.1016/J.Bbrc.2005.07.204  0.418
2005 Nagano S, Poulos TL. Crystallographic study on the dioxygen complex of wild-type and mutant cytochrome P450cam. Implications for the dioxygen activation mechanism. The Journal of Biological Chemistry. 280: 31659-63. PMID 15994329 DOI: 10.1074/Jbc.M505261200  0.405
2005 Poulos TL. Intermediates in P450 catalysis. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 363: 793-806; discussion . PMID 15901536 DOI: 10.1098/Rsta.2004.1537  0.404
2005 Bhaskar B, Poulos TL. The 1.13-A structure of iron-free cytochrome c peroxidase. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 10: 425-30. PMID 15900441 DOI: 10.1007/S00775-005-0654-4  0.373
2005 Sundaramoorthy M, Youngs HL, Gold MH, Poulos TL. High-resolution crystal structure of manganese peroxidase: substrate and inhibitor complexes. Biochemistry. 44: 6463-70. PMID 15850380 DOI: 10.1021/Bi047318E  0.416
2005 Nagano S, Cupp-Vickery JR, Poulos TL. Crystal structures of the ferrous dioxygen complex of wild-type cytochrome P450eryF and its mutants, A245S and A245T: investigation of the proton transfer system in P450eryF. The Journal of Biological Chemistry. 280: 22102-7. PMID 15824115 DOI: 10.1074/Jbc.M501732200  0.387
2005 Kuznetsov VY, Blair E, Farmer PJ, Poulos TL, Pifferitti A, Sevrioukova IF. The putidaredoxin reductase-putidaredoxin electron transfer complex: theoretical and experimental studies. The Journal of Biological Chemistry. 280: 16135-42. PMID 15716266 DOI: 10.1074/Jbc.M500771200  0.406
2005 Lad L, Koshkin A, Ortiz De Montellano PR, Poulos TL. Crystal structures of the G139A, G139A-NO and G143H mutants of human heme oxygenase-1. A finely tuned hydrogen-bonding network controls oxygenase versus peroxidase activity Journal of Biological Inorganic Chemistry. 10: 138-146. PMID 15690204 DOI: 10.1007/S00775-004-0620-6  0.398
2005 Li H, Poulos TL. Structure-function studies on nitric oxide synthases Journal of Inorganic Biochemistry. 99: 293-305. PMID 15598508 DOI: 10.1016/J.Jinorgbio.2004.10.016  0.503
2005 Wang J, Lad L, Poulos TL, Ortiz de Montellano PR. Regiospecificity determinants of human heme oxygenase: differential NADPH- and ascorbate-dependent heme cleavage by the R183E mutant. The Journal of Biological Chemistry. 280: 2797-806. PMID 15525643 DOI: 10.1074/Jbc.M411229200  0.411
2005 Poulos TL. Structural and functional diversity in heme monooxygenases Drug Metabolism and Disposition. 33: 10-18. PMID 15475411 DOI: 10.1124/Dmd.104.002071  0.457
2004 Li H, Poulos TL. Crystallization of cytochromes P450 and substrate-enzyme interactions Current Topics in Medicinal Chemistry. 4: 1789-1802. PMID 15579108 DOI: 10.2174/1568026043387205  0.388
2004 Lad L, Ortiz de Montellano PR, Poulos TL. Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavage. Journal of Inorganic Biochemistry. 98: 1686-95. PMID 15522396 DOI: 10.1016/J.Jinorgbio.2004.07.004  0.461
2004 Wang J, Niemevz F, Lad L, Huang L, Alvarez DE, Buldain G, Poulos TL, Ortiz De Montellano PR. Human heme oxygenase oxidation of 5- and 15-phenylhemes Journal of Biological Chemistry. 279: 42593-42604. PMID 15297453 DOI: 10.1074/Jbc.M406346200  0.391
2004 Nagano S, Tosha T, Ishimori K, Morishima I, Poulos TL. Crystal structure of the cytochrome P450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding Journal of Biological Chemistry. 279: 42844-42849. PMID 15269210 DOI: 10.1074/Jbc.M404217200  0.465
2004 Meharenna YT, Li H, Hawkes DB, Pearson AG, De Voss J, Poulos TL. Crystal structure of P450cin in a complex with its substrate, 1,8-cineole, a close structural homologue to D-camphor, the substrate for P450cam Biochemistry. 43: 9487-9494. PMID 15260491 DOI: 10.1021/Bi049293P  0.475
2004 Barrows TP, Bhaskar B, Poulos TL. Electrostatic control of the tryptophan radical in cytochrome c peroxidase. Biochemistry. 43: 8826-34. PMID 15236591 DOI: 10.1021/Bi049531G  0.793
2004 Friedman J, Lad L, Li H, Wilks A, Poulos TL. Structural Basis for Novel δ-Regioselective Heme Oxygenation in the Opportunistic Pathogen Pseudomonas aeruginosa Biochemistry. 43: 5239-5245. PMID 15122889 DOI: 10.1021/Bi049687G  0.383
2004 Flinspach M, Li H, Jamal J, Yang W, Huang H, Silverman RB, Poulos TL. Structures of the neuronal and endothelial nitric oxide synthase heme domain with D-nitroarginine-containing dipeptide inhibitors bound. Biochemistry. 43: 5181-7. PMID 15122883 DOI: 10.1021/Bi0361867  0.814
2004 Sevrioukova IF, Li H, Poulos TL. Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida, the Final Structural Component of the Cytochrome P450cam Monooxygenase Journal of Molecular Biology. 336: 889-902. PMID 15095867 DOI: 10.1016/J.Jmb.2003.12.067  0.482
2004 Guo M, Bhaskar B, Li H, Barrows TP, Poulos TL. Crystal structure and characterization of a cytochrome c peroxidase-cytochrome c site-specific cross-link. Proceedings of the National Academy of Sciences of the United States of America. 101: 5940-5. PMID 15071191 DOI: 10.1073/Pnas.0306708101  0.803
2004 Lad L, Friedman J, Li H, Bhaskar B, Ortiz de Montellano PR, Poulos TL. Crystal structure of human heme oxygenase-1 in a complex with biliverdin. Biochemistry. 43: 3793-801. PMID 15049686 DOI: 10.1021/Bi035451L  0.403
2004 Flinspach ML, Li H, Jamal J, Yang W, Huang H, Hah JM, Gómez-Vidal JA, Litzinger EA, Silverman RB, Poulos TL. Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase. Nature Structural & Molecular Biology. 11: 54-9. PMID 14718923 DOI: 10.1038/Nsmb704  0.827
2003 Ji H, Li H, Flinspach M, Poulos TL, Silverman RB. Computer modeling of selective regions in the active site of nitric oxide synthases: implication for the design of isoform-selective inhibitors. Journal of Medicinal Chemistry. 46: 5700-11. PMID 14667223 DOI: 10.1021/Jm030301U  0.807
2003 Poulos TL. The past and present of P450cam structural biology Biochemical and Biophysical Research Communications. 312: 35-39. PMID 14630013 DOI: 10.1016/J.Bbrc.2003.09.239  0.316
2003 Poulos TL. Cytochrome P450 flexibility Proceedings of the National Academy of Sciences of the United States of America. 100: 13121-13122. PMID 14597705 DOI: 10.1073/Pnas.2336095100  0.34
2003 Sevrioukova IF, Garcia C, Li H, Bhaskar B, Poulos TL. Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida Journal of Molecular Biology. 333: 377-392. PMID 14529624 DOI: 10.1016/J.Jmb.2003.08.028  0.43
2003 Bretscher LE, Li H, Poulos TL, Griffith OW. Structural Characterization and Kinetics of Nitric-oxide Synthase Inhibition by Novel N5-(Iminoalkyl)- and N 5-(Iminoalkenyl)-ornithines Journal of Biological Chemistry. 278: 46789-46797. PMID 12960153 DOI: 10.1074/Jbc.M306787200  0.407
2003 Yano JK, Poulos TL. New understandings of thermostable and peizostable enzymes. Current Opinion in Biotechnology. 14: 360-5. PMID 12943843 DOI: 10.1016/S0958-1669(03)00075-2  0.71
2003 Nagano S, Li H, Shimizu H, Nishida C, Ogura H, Ortiz de Montellano PR, Poulos TL. Crystal structures of epothilone D-bound, epothilone B-bound, and substrate-free forms of cytochrome P450epoK. The Journal of Biological Chemistry. 278: 44886-93. PMID 12933799 DOI: 10.1074/Jbc.M308115200  0.467
2003 Lad L, Wang J, Li H, Friedman J, Bhaskar B, Ortiz de Montellano PR, Poulos TL. Crystal structures of the ferric, ferrous, and ferrous-NO forms of the Asp140Ala mutant of human heme oxygenase-1: catalytic implications. Journal of Molecular Biology. 330: 527-38. PMID 12842469 DOI: 10.1016/S0022-2836(03)00578-3  0.411
2003 Friedman J, Lad L, Deshmukh R, Li H, Wilks A, Poulos TL. Crystal structures of the NO- and CO-bound heme oxygenase from Neisseriae meningitidis: Implications for O2 activation Journal of Biological Chemistry. 278: 34654-34659. PMID 12819228 DOI: 10.1074/Jbc.M302985200  0.407
2003 Jia Q, Cai T, Huang M, Li H, Xian M, Poulos TL, Wang PG. Isoform-selective substrates of nitric oxide synthase. Journal of Medicinal Chemistry. 46: 2271-4. PMID 12773030 DOI: 10.1021/Jm0340703  0.37
2003 Bonagura CA, Bhaskar B, Shimizu H, Li H, Sundaramoorthy M, McRee DE, Goodin DB, Poulos TL. High-resolution crystal structures and spectroscopy of native and Compound I cytochrome c peroxidase Biochemistry. 42: 5600-5608. PMID 12741816 DOI: 10.1021/Bi034058C  0.387
2003 Bhaskar B, Immoos CE, Shimizu H, Sulc F, Farmer PJ, Poulos TL. A novel heme and peroxide-dependent tryptophan-tyrosine cross-link in a mutant of cytochrome c peroxidase. Journal of Molecular Biology. 328: 157-66. PMID 12684005 DOI: 10.1016/S0022-2836(03)00179-7  0.458
2003 Lad L, Schuller DJ, Shimizu H, Friedman J, Li H, Ortiz de Montellano PR, Poulos TL. Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1. The Journal of Biological Chemistry. 278: 7834-43. PMID 12500973 DOI: 10.1074/Jbc.M211450200  0.467
2003 Yano JK, Blasco F, Li H, Schmid RD, Henne A, Poulos TL. Preliminary characterization and crystal structure of a thermostable cytochrome P450 from Thermus thermophilus. The Journal of Biological Chemistry. 278: 608-16. PMID 12401810 DOI: 10.1074/Jbc.M206568200  0.73
2002 Li H, Shimizu H, Flinspach M, Jamal J, Yang W, Xian M, Cai T, Wen EZ, Jia Q, Wang PG, Poulos TL. The novel binding mode of N-alkyl-N'-hydroxyguanidine to neuronal nitric oxide synthase provides mechanistic insights into NO biosynthesis. Biochemistry. 41: 13868-75. PMID 12437343 DOI: 10.1021/Bi020417C  0.808
2002 Li H, Yano JK, Poulos TL. Molecular replacement in P450 crystal structure determinations. Methods in Enzymology. 357: 79-93. PMID 12424900 DOI: 10.1016/S0076-6879(02)57668-0  0.725
2002 Immoos CE, Bhaskar B, Cohen MS, Barrows TP, Farmer PJ, Poulos TL. Mesopone cytochrome c peroxidase: functional model of heme oxygenated oxidases. Journal of Inorganic Biochemistry. 91: 635-43. PMID 12237229 DOI: 10.1016/S0162-0134(02)00447-6  0.807
2002 Sevrioukova IF, Poulos TL. Putidaredoxin reductase, a new function for an old protein Journal of Biological Chemistry. 277: 25831-25839. PMID 12011076 DOI: 10.1074/Jbc.M201110200  0.422
2002 Bhaskar B, Bonagura CA, Li H, Poulos TL. Cation-induced stabilization of the engineered cation-binding loop in cytochrome c peroxidase (CcP) Biochemistry. 41: 2684-2693. PMID 11851415 DOI: 10.1021/Bi011599Y  0.435
2002 Poulos TL, Barrows T, Bhaskar B, Bonagura CA, Li H. Coupling crystallography and computational biochemistry in understanding heme enzyme structure and function International Journal of Quantum Chemistry. 88: 211-219. DOI: 10.1002/Qua.10113  0.809
2001 Podust LM, Stojan J, Poulos TL, Waterman MR. Substrate recognition sites in 14α-sterol demethylase from comparative analysis of amino acid sequences and X-ray structure of Mycobacterium tuberculosis CYP51 Journal of Inorganic Biochemistry. 87: 227-235. PMID 11744060 DOI: 10.1016/S0162-0134(01)00388-9  0.437
2001 Shimizu H, Schuller DJ, Lanzilotta WN, Sundaramoorthy M, Arciero DM, Hooper AB, Poulos TL. Crystal structure of Nitrosomonas europaea cytochrome c peroxidase and the structural basis for ligand switching in bacterial di-heme peroxidases. Biochemistry. 40: 13483-90. PMID 11695895 DOI: 10.1021/Bi011481H  0.487
2001 Raman CS, Li H, Martásek P, Southan G, Masters BS, Poulos TL. Crystal structure of nitric oxide synthase bound to nitro indazole reveals a novel inactivation mechanism. Biochemistry. 40: 13448-55. PMID 11695891 DOI: 10.1021/Bi010957U  0.494
2001 Edwards SL, Raag R, Wariishi H, Gold MH, Poulos TL. Crystal structure of lignin peroxidase. Proceedings of the National Academy of Sciences of the United States of America. 90: 750-4. PMID 11607355 DOI: 10.1073/Pnas.90.2.750  0.459
2001 Kotsonis P, Fröhlich LG, Raman CS, Li H, Berg M, Gerwig R, Groehn V, Kang Y, Al-Masoudi N, Taghavi-Moghadam S, Mohr D, Münch U, Schnabel J, Martásek P, Masters BS, ... ... Poulos T, et al. Structural basis for pterin antagonism in nitric-oxide synthase. Development of novel 4-oxo-pteridine antagonists of (6R)-5,6,7,8-tetrahydrobiopterin. The Journal of Biological Chemistry. 276: 49133-41. PMID 11590164 DOI: 10.1074/Jbc.M011469200  0.506
2001 Schuller DJ, Zhu W, Stojiljkovic I, Wilks A, Poulos TL. Crystal structure of heme oxygenase from the gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1 Biochemistry. 40: 11552-11558. PMID 11560504 DOI: 10.1021/Bi0110239  0.436
2001 Roberts GP, Thorsteinsson MV, Kerby RL, Lanzilotta WN, Poulos T. CooA: a heme-containing regulatory protein that serves as a specific sensor of both carbon monoxide and redox state. Progress in Nucleic Acid Research and Molecular Biology. 67: 35-63. PMID 11525385 DOI: 10.1016/S0079-6603(01)67024-7  0.388
2001 Sevrioukova IF, Hazzard JT, Tollin G, Poulos TL. Laser flash induced electron transfer in P450cam monooxygenase: Putidaredoxin reductase - Putidaredoxin interaction Biochemistry. 40: 10592-10600. PMID 11524002 DOI: 10.1021/Bi010874D  0.353
2001 Raman CS, Li H, Martásek P, Babu BR, Griffith OW, Masters BSS, Poulos TL. Implications for Isoform-selective Inhibitor Design Derived from the Binding Mode of Bulky Isothioureas to the Heme Domain of Endothelial Nitric-oxide Synthase Journal of Biological Chemistry. 276: 26486-26491. PMID 11331290 DOI: 10.1074/Jbc.M102255200  0.482
2001 Li H, Raman CS, Martásek P, Masters BS, Poulos TL. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors. Biochemistry. 40: 5399-406. PMID 11331003 DOI: 10.1021/Bi002658V  0.445
2001 Podust LM, Poulos TL, Waterman MR. Crystal structure of cytochrome P450 14α-sterol demethylase (CYP51) from Mycobacterium tuberculosis in complex with azole inhibitors Proceedings of the National Academy of Sciences of the United States of America. 98: 3068-3073. PMID 11248033 DOI: 10.1073/Pnas.061562898  0.402
2001 Lightning LK, Huang HW, Moënne-Loccoz P, Loehr TM, Schuller DJ, Poulos TL, Ortiz De Montellano PR. Disruption of an Active Site Hydrogen Bond Converts Human Heme Oxygenase-1 into a Peroxidase Journal of Biological Chemistry. 276: 10612-10619. PMID 11121422 DOI: 10.1074/Jbc.M010349200  0.378
2001 Tosha T, Yoshioka S, Harada H, Ishimori K, Yano J, Poulos T, Morishima I. Structural Studies on P450cam-Putidaredoxin Complex Using a P450cam Mutant Seibutsu Butsuri. 41: S117. DOI: 10.2142/Biophys.41.S117_2  0.718
2000 Satterlee JD, Teske JG, Erman JE, Mauro JM, Poulos TL. Temperature, pH, and solvent isotope effects on cytochrome c peroxidase mutant N82A studied by proton NMR Journal of Protein Chemistry. 19: 535-542. PMID 11195979 DOI: 10.1023/A:1026513818176  0.34
2000 Li H, Raman CS, Martásek P, Král V, Masters BS, Poulos TL. Mapping the active site polarity in structures of endothelial nitric oxide synthase heme domain complexed with isothioureas. Journal of Inorganic Biochemistry. 81: 133-9. PMID 11051558 DOI: 10.1016/S0162-0134(00)00099-4  0.476
2000 Lanzilotta WN, Schuller DJ, Thorsteinsson MV, Kerby RL, Roberts GP, Poulos TL. Structure of the CO sensing transcription activator CooA. Nature Structural Biology. 7: 876-80. PMID 11017196 DOI: 10.1038/82820  0.394
2000 Liu Y, Koenigs Lightning L, Huang H, Moënne-Loccoz P, Schuller DJ, Poulos TL, Loehr TM, Ortiz de Montellano PR. Replacement of the distal glycine 139 transforms human heme oxygenase-1 into a peroxidase. The Journal of Biological Chemistry. 275: 34501-7. PMID 10942763 DOI: 10.1074/Jbc.M004245200  0.437
2000 Yano JK, Koo LS, Schuller DJ, Li H, Ortiz de Montellano PR, Poulos TL. Crystal structure of a thermophilic cytochrome P450 from the archaeon Sulfolobus solfataricus. The Journal of Biological Chemistry. 275: 31086-92. PMID 10859321 DOI: 10.1074/Jbc.M004281200  0.765
2000 Bursey EH, Poulos TL. Two substrate binding sites in ascorbate peroxidase: The role of Arginine 172 Biochemistry. 39: 7374-7379. PMID 10858284 DOI: 10.1021/Bi000446S  0.389
2000 Sevrioukova IF, Immoos CE, Poulos TL, Farmer P. Electron transfer in the ruthenated heme domain of cytochrome P450BM-3 Israel Journal of Chemistry. 40: 47-53. DOI: 10.1560/Vrgj-De54-Xdnm-5Ph3  0.348
2000 Poulos TL, Li H, Raman CS, Schuller DJ. Structures of gas-generating heme enzymes: Nitric oxide synthase and heme oxygenase Advances in Inorganic Chemistry. 51: 243-294. DOI: 10.1016/S0898-8838(00)51005-8  0.379
2000 Bhaskar B, Bonagura CA, Jamal J, Poulos TL. Loop Stability in the Engineered Potassium Binding Site of Cytochrome c Peroxidase Tetrahedron. 56: 9471-9475. DOI: 10.1016/S0040-4020(00)00831-0  0.405
1999 Bonagura CA, Bhaskar B, Sundaramoorthy M, Poulos TL. Conversion of an engineered potassium-binding site into a calcium- selective site in cytochrome c peroxidase Journal of Biological Chemistry. 274: 37827-37833. PMID 10608846 DOI: 10.1074/Jbc.274.53.37827  0.433
1999 Sevrioukova IF, Hazzard JT, Tollin G, Poulos TL. The FMN to heme electron transfer in cytochrome P450BM-3. Effect of chemical modification of cysteines engineered at the FMN-heme domain interaction site Journal of Biological Chemistry. 274: 36097-36106. PMID 10593892 DOI: 10.1074/Jbc.274.51.36097  0.439
1999 Li H, Poulos TL. Fatty acid metabolism, conformational change, and electron transfer in cytochrome P-450(BM-3) Biochimica Et Biophysica Acta - Molecular and Cell Biology of Lipids. 1441: 141-149. PMID 10570242 DOI: 10.1016/S1388-1981(99)00161-4  0.444
1999 Cheek J, Mandelman D, Poulos TL, Dawson JH. A study of the K(+)-site mutant of ascorbate peroxidase: mutations of protein residues on the proximal side of the heme cause changes in iron ligation on the distal side. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 4: 64-72. PMID 10499104 DOI: 10.1007/S007750050290  0.407
1999 Schuller DJ, Wilks A, Ortiz De Montellano PR, Poulos TL. Crystal structure of human heme oxygenase-1 Nature Structural Biology. 6: 860-867. PMID 10467099 DOI: 10.1038/12319  0.46
1999 Li H, Raman CS, Glaser CB, Blasko E, Young TA, Parkinson JF, Whitlow M, Poulos TL. Crystal structures of zinc-free and -bound heme domain of human inducible nitric-oxide synthase. Implications for dimer stability and comparison with endothelial nitric-oxide synthase. The Journal of Biological Chemistry. 274: 21276-84. PMID 10409685 DOI: 10.1074/Jbc.274.30.21276  0.5
1999 Poulos TL, Li H, Raman CS. Heme-mediated oxygen activation in biology: cytochrome c oxidase and nitric oxide synthase. Current Opinion in Chemical Biology. 3: 131-7. PMID 10348620 DOI: 10.1016/S1367-5931(99)80024-6  0.432
1999 Bonagura CA, Sundaramoorthy M, Bhaskar B, Poulos TL. The effects of an engineered cation site on the structure, activity, and EPR properties of cytochrome c peroxidase Biochemistry. 38: 5538-5545. PMID 10220341 DOI: 10.1021/Bi982996K  0.379
1999 Sevrioukova IF, Li H, Zhang H, Peterson JA, Poulos TL. Structure of a cytochrome P450-redox partner electron-transfer complex Proceedings of the National Academy of Sciences of the United States of America. 96: 1863-1868. PMID 10051560 DOI: 10.1073/Pnas.96.5.1863  0.44
1998 Schuller DJ, Wilks A, De Montellano PO, Poulos TL. Crystallization of recombinant human heme oxygenase-1 Protein Science. 7: 1836-1838. PMID 10082382 DOI: 10.1002/Pro.5560070820  0.393
1998 Raman CS, Li H, Martásek P, Král V, Masters BS, Poulos TL. Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center. Cell. 95: 939-50. PMID 9875848 DOI: 10.1016/S0092-8674(00)81718-3  0.479
1998 Mandelman D, Jamal J, Poulos TL. Identification of two electron-transfer sites in ascorbate peroxidase using chemical modification, enzyme kinetics, and crystallography Biochemistry. 37: 17610-17617. PMID 9860877 DOI: 10.1021/Bi981958Y  0.477
1998 Mandelman D, Schwarz FP, Li H, Poulos TL. The role of quaternary interactions on the stability and activity of ascorbate peroxidase Protein Science. 7: 2089-2098. PMID 9792095 DOI: 10.1002/Pro.5560071005  0.354
1998 Sundaramoorthy M, Terner J, Poulos TL. Stereochemistry of the chloroperoxidase active site: Crystallographic and molecular-modeling studies Chemistry and Biology. 5: 461-473. PMID 9751642 DOI: 10.1016/S1074-5521(98)90003-5  0.449
1998 Vidakovic M, Sligar SG, Li H, Poulos TL. Understanding the role of the essential Asp251 in cytochrome p450cam using site-directed mutagenesis, crystallography, and kinetic solvent isotope effect. Biochemistry. 37: 9211-9. PMID 9649301 DOI: 10.1021/Bi980189F  0.401
1998 Nissum M, Neri F, Mandelman D, Poulos TL, Smulevich G. Spectroscopic characterization of recombinant pea cytosolic ascorbate peroxidase: Similarities and differences with cytochrome c peroxidase Biochemistry. 37: 8080-8087. PMID 9609702 DOI: 10.1021/Bi980111Z  0.374
1998 Poulos TL, Raman CS, Li H. NO news is good news. Structure (London, England : 1993). 6: 255-8. PMID 9551547 DOI: 10.1016/S0969-2126(98)00028-8  0.43
1997 Gajhede M, Schuller DJ, Henriksen A, Smith AT, Poulos TL. Crystal structure of horseradish peroxidase C at 2.15 A resolution. Nature Structural Biology. 4: 1032-8. PMID 9406554 DOI: 10.1038/Nsb1297-1032  0.41
1997 Daff SN, Chapman SK, Turner KL, Holt RA, Govindaraj S, Poulos TL, Munro AW. Redox control of the catalytic cycle of flavocytochrome P-450 BM3. Biochemistry. 36: 13816-23. PMID 9374858 DOI: 10.1021/Bi971085S  0.359
1997 Sundaramoorthy M, Kishi K, Gold MH, Poulos TL. Crystal structures of substrate binding site mutants of manganese peroxidase Journal of Biological Chemistry. 272: 17574-17580. PMID 9211904 DOI: 10.1074/Jbc.272.28.17574  0.435
1997 Hazzard JT, Govindaraj S, Poulos TL, Tolling G. Electron transfer between the FMN and heme domains of cytochrome P450BM- 3: Effects of substrate and CO Journal of Biological Chemistry. 272: 7922-7926. PMID 9065460 DOI: 10.1074/Jbc.272.12.7922  0.349
1997 Govindaraj S, Poulos TL. The domain architecture of cytochrome P450BM-3 Journal of Biological Chemistry. 272: 7915-7921. PMID 9065459 DOI: 10.1074/Jbc.272.12.7915  0.353
1997 Li H, Poulos TL. The structure of the cytochrome p450BM-3 haem domain complexed with the fatty acid substrate, palmitoleic acid Nature Structural Biology. 4: 140-146. PMID 9033595 DOI: 10.1038/Nsb0297-140  0.382
1997 Cupp-Vickery JR, Poulos TL. Structure of cytochrome P450eryF: Substrate, inhibitors, and model compounds bound in the active site Steroids. 62: 112-116. PMID 9029724 DOI: 10.1016/S0039-128X(96)00168-7  0.489
1996 Li H, Poulos TL. Conformational dynamics in cytochrome P450-substrate interactions Biochimie. 78: 695-699. PMID 9010597 DOI: 10.1016/S0300-9084(97)82526-6  0.418
1996 Govindaraj S, Poulos TL. Probing the structure of the linker connecting the reductase and heme domains of cytochrome P450BM-3 using site-directed mutagenesis Protein Science. 5: 1389-1393. PMID 8819171 DOI: 10.1002/Pro.5560050717  0.421
1996 Pappa H, Li H, Sundaramoorthy M, Arciero D, Hooper A, Poulos TL. Crystallization and preliminary crystallographic analysis of cytochrome c553 peroxidase from Nitrosomonas europaea Journal of Structural Biology. 116: 429-431. PMID 8813001 DOI: 10.1006/Jsbi.1996.0060  0.326
1996 Schuller DJ, Ban N, Van Huystee RB, McPherson A, Poulos TL. The crystal structure of peanut peroxidase Structure. 4: 311-321. PMID 8805539 DOI: 10.1016/S0969-2126(96)00035-4  0.36
1996 Poulos TL. Approaches to crystallizing P450s Methods in Enzymology. 272: 358-368. PMID 8791795 DOI: 10.1016/S0076-6879(96)72041-4  0.3
1996 Cupp-Vickery JR, Han O, Hutchinson CR, Poulos TL. Substrate-assisted catalysis in cytochrome P450eryF. Nature Structural Biology. 3: 632-7. PMID 8673608 DOI: 10.1038/Nsb0796-632  0.387
1996 Pappa HS, Tajbaksh S, Saunders AJ, Pielak GJ, Poulos TL. Probing the cytochrome c peroxidase-cytochrome c electron transfer reaction using site specific cross-linking. Biochemistry. 35: 4837-45. PMID 8664274 DOI: 10.1021/Bi952935B  0.404
1996 Bonagura CA, Sundaramoorthy M, Pappa HS, Patterson WR, Poulos TL. An engineered cation site in cytochrome c peroxidase alters the reactivity of the redox active tryptophan Biochemistry. 35: 6107-6115. PMID 8634253 DOI: 10.1021/Bi960122X  0.498
1996 Poulos TL. Ligands and electrons and haem proteins Nature Structural Biology. 3: 401-403. PMID 8612066 DOI: 10.1038/Nsb0596-401  0.427
1996 Poulos TL. The role of the proximal ligand in heme enzymes Jbic Journal of Biological Inorganic Chemistry. 1: 356-359. DOI: 10.1007/S007750050064  0.396
1996 Pappa H, Patterson WR, Poulos TL. The homologous tryptophan critical for cytochrome c peroxidase function is not essential for ascorbate peroxidase activity Jbic Journal of Biological Inorganic Chemistry. 1: 61-66. DOI: 10.1007/S007750050023  0.492
1995 Sundaramoorthy M, Terner J, Poulos TL. The crystal structure of chloroperoxidase: a heme peroxidase-cytochrome P450 functional hybrid Structure. 3: 1367-1378. PMID 8747463 DOI: 10.1016/S0969-2126(01)00274-X  0.47
1995 Pappa HS, Poulos TL. Site-specific cross-linking as a method for studying intramolecular electron transfer Biochemistry. 34: 6573-6580. PMID 7756288 DOI: 10.1021/Bi00020A001  0.406
1995 Cupp Vickery JR, Poulos TL. Structure of cytochrome P450eryF involved in erythromycin biosynthesis Nature Structural Biology. 2: 144-153. PMID 7749919 DOI: 10.1038/Nsb0295-144  0.351
1995 Patterson WR, Poulos TL, Goodin DB. Identification of a porphyrin π cation radical in ascorbate peroxidase compound I Biochemistry. 34: 4342-4345. PMID 7703248 DOI: 10.1021/Bi00013A024  0.365
1995 Patterson WR, Poulos TL. Crystal structure of recombinant pea cytosolic ascorbate peroxidase Biochemistry. 34: 4331-4341. PMID 7703247 DOI: 10.1021/Bi00013A023  0.453
1995 Poulos TL, Patterson WR, Sundaramoorthy M. The crystal structure of ascorbate and manganese peroxidases: The role of non-haem metal in the catalytic mechanism Biochemical Society Transactions. 23: 228-232. PMID 7672248 DOI: 10.1042/Bst0230228  0.442
1995 Govindaraj S, Poulos TL. Role of the linker region connecting the reductase and heme domains in cytochrome p450(BM-3) Biochemistry. 34: 11221-11226. PMID 7669780 DOI: 10.1021/Bi00035A031  0.358
1995 Yeom H, Sligar SG, Li H, Poulos TL, Fulco AJ. The role of Thr268 in oxygen activation of cytochrome P450BM-3 Biochemistry. 34: 14733-14740. PMID 7578081 DOI: 10.1021/Bi00045A014  0.435
1995 Smulevich G, Neri F, Willemsen O, Choudhury K, Marzocchi MP, Poulos TL. Effect of the His175-->Glu mutation on the heme pocket architecture of cytochrome c peroxidase. Biochemistry. 34: 13485-90. PMID 7577937 DOI: 10.1021/Bi00041A028  0.379
1995 Sundaramoorthy M, Mauro JM, Sullivan AM, Terner J, Poulos TL. Preliminary crystallographic analysis of chloroperoxidase from Caldariomyces fumago Acta Crystallographica - Section D Biological Crystallography. 51: 842-844. DOI: 10.1107/S0907444995001144  0.307
1995 Li Huiying, Poulos TL. Modeling protein-substrate interactions in the heme domain of cytochrome P450BM-3 Acta Crystallographica - Section D Biological Crystallography. 51: 21-32. DOI: 10.1107/S0907444994009194  0.418
1995 Li H, Narasimhulu S, Havran LM, Winkler JD, Poulos TL. Crystal Structure of Cytochrome P450cam Complexed with Its Catalytic Product, 5-exo-Hydroxycamphor Journal of the American Chemical Society. 117: 6297-6299. DOI: 10.1021/Ja00128A019  0.351
1995 Sundaramoorthy M, Terner J, Poulos TL. The crystal structure of chloroperoxidase: A heme peroxidase-cytochrome P450 functional hybrid Journal of Inorganic Biochemistry. 59: 427. DOI: 10.1016/0162-0134(95)97523-S  0.356
1994 Sundaramoorthy M, Kishi K, Gold MH, Poulos TL. Preliminary crystallographic analysis of manganese peroxidase from phanerochaete chrysosporium Journal of Molecular Biology. 238: 845-848. PMID 8182752 DOI: 10.1006/Jmbi.1994.1338  0.3
1994 DeLauder SF, Mauro JM, Poulos TL, Williams JC, Schwarz FP. Thermodynamics of hydrogen cyanide and hydrogen fluoride binding to cytochrome c peroxidase and its Asn-82→Asp mutant Biochemical Journal. 302: 437-442. PMID 8092995 DOI: 10.1042/Bj3020437  0.328
1994 Satterlee JD, Alam SL, Mauro JM, Erman JE, Poulos TL. The effect of the Asn82→Asp mutation in yeast cytochrome c peroxidase studied by proton NMR spectroscopy European Journal of Biochemistry. 224: 81-87. PMID 8076654 DOI: 10.1111/J.1432-1033.1994.Tb19997.X  0.366
1994 Gonvindaraj S, Li H, Poulos TL. Flavin supported fatty acid oxidation by the heme domain of Bacillus megaterium cytochrome P450BM-3 Biochemical and Biophysical Research Communications. 203: 1745-1749. PMID 7945324 DOI: 10.1006/Bbrc.1994.2388  0.323
1994 Li H, Poulos TL. Structural variation in heme enzymes: a comparative analysis of peroxidase and P450 crystal structures Structure. 2: 461-464. PMID 7922023 DOI: 10.1016/S0969-2126(00)00046-0  0.372
1994 Cupp-Vickery JR, Li H, Poulos TL. Preliminary crystallographic analysis of an enzyme involved in erythromycin biosynthesis: Cytochrome P450eryF Proteins: Structure, Function and Genetics. 20: 197-201. PMID 7846029 DOI: 10.1002/Prot.340200210  0.336
1993 Raag R, Li H, Jones BC, Poulos TL. Inhibitor-induced conformational change in cytochrome P-450CAM Biochemistry. 32: 4571-4578. PMID 8485133 DOI: 10.1021/Bi00068A013  0.456
1993 Poulos TL, Edwards SL, Wariishi H, Gold MH. Crystallographic refinement of lignin peroxidase at 2 å Journal of Biological Chemistry. 268: 4429-4440. PMID 8440725 DOI: 10.2210/Pdb1Lga/Pdb  0.454
1993 Poulos TL, Howard AJ. Crystal structures of metyrapone- and phenylimidazole-inhibited complexes of cytochrome P-450cam Biochemistry. 26: 8165-8174. DOI: 10.2210/Pdb1Phg/Pdb  0.46
1992 Poulos TL, Raag R. Cytochrome P450cam: Crystallography, oxygen activation, and electron transfer Faseb Journal. 6: 674-679. PMID 1537455 DOI: 10.1096/Fasebj.6.2.1537455  0.389
1991 Whitlow M, Howard AJ, Finzel BC, Poulos TL, Winborne E, Gilliland GL. A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose. Proteins. 9: 153-73. PMID 2006134 DOI: 10.1002/Prot.340090302  0.372
1991 Raag R, Poulos TL. Crystal structures of cytochrome P-450CAM complexed with camphane, thiocamphor, and adamantane: Factors controlling P-450 substrate hydroxylation Biochemistry®. 30: 2674-2684. PMID 2001355 DOI: 10.1021/Bi00224A016  0.431
1991 Poulos TL. Modeling of mammalian P450s on basis of P450cam X-ray structure Methods in Enzymology. 206: 11-30. PMID 1784202 DOI: 10.1016/0076-6879(91)06073-C  0.335
1991 Raag R, Martinis SA, Sligar SG, Poulos TL. Crystal structure of the cytochrome P-450(CAM) active site mutant Thr252Ala Biochemistry. 30: 11420-11429. PMID 1742281 DOI: 10.2210/Pdb2Cp4/Pdb  0.466
1991 Darwish K, Huiying L, Poulos TL. Engineering proteins, subcloning and hyperexpressing oxidoreductase genes Protein Engineering. 4: 701-708. PMID 1658778 DOI: 10.1093/Protein/4.6.701  0.313
1991 Sundaramoorthy M, Choudhury K, Edwards SL, Poulos TL. Crystal structure and preliminary functional analysis of the cytochrome c peroxidase His175Gln proximal ligand mutant Journal of the American Chemical Society. 113: 7755-7757. DOI: 10.1021/Ja00020A044  0.392
1990 Furuya H, Shimizu T, Hirano K, Hatano M, Fujii-Kuriyama Y, Raag R, Poulos TL. Site-directed mutageneses of rat liver cytochrome P-450d: catalytic activities toward benzphetamine and 7-ethoxycoumarin. Biochemistry. 28: 6848-57. PMID 2819037 DOI: 10.1021/Bi00443A011  0.334
1990 Raag R, Swanson BA, Poulos TL, De Ortiz Montellano PR. Formation, crystal structure, and rearrangement of a cytochrome P-450cam Iron-phenyl complex Biochemistry. 29: 8119-8126. PMID 2261467 DOI: 10.1021/Bi00487A019  0.43
1990 Smulevich G, Wang Y, Edwards SL, Poulos TL, English AM, Spiro TG. Resonance Raman spectroscopy of cytochrome c peroxidase single crystals on a variable-temperature microscope stage. Biochemistry. 29: 2586-92. PMID 2159325 DOI: 10.1021/Bi00462A022  0.352
1990 Fox T, Hazzard JT, Edwards SL, English AM, Poulos TL, Tollin G. Rate of intramolecular reduction of ferryl iron in compound I of cytochrome c peroxidase Journal of the American Chemical Society. 112: 7426-7428. DOI: 10.1021/Ja00176A071  0.303
1989 Raag R, Poulos TL. The structural basis for substrate-induced changes in redox potential and spin equilibrium in cytochrome P-450CAM Biochemistry. 28: 917-922. PMID 2713354 DOI: 10.1021/Bi00428A077  0.451
1989 Stayton PS, Poulos TL, Sligar SG. Putidaredoxin competitively inhibits cytochrome b5-cytochrome P-450cam association: A proposed molecular model for a cytochrome P-450cam electron-transfer complex Biochemistry. 28: 8201-8205. PMID 2690937 DOI: 10.1021/Bi00446A035  0.376
1989 Raag R, Poulos TL. Crystal structure of the carbon monoxide-substrate-cytochrome P-450CAM ternary complex Biochemistry. 28: 7586-7592. PMID 2611203 DOI: 10.1021/Bi00445A013  0.391
1989 Fox T, English A, Edwards S, Poulos T. Preparation and characterization of a pentaammine ruthenium (III)-cytochrome c peroxidase derivative Journal of Inorganic Biochemistry. 36: 215. DOI: 10.1016/0162-0134(89)84201-1  0.305
1988 Poulos TL. Cytochrome P450: Molecular Architecture, Mechanism, and Prospects for Rational Inhibitor Design Pharmaceutical Research: An Official Journal of the American Association of Pharmaceutical Scientists. 5: 67-75. PMID 3073382 DOI: 10.1023/A:1015920931701  0.473
1988 Pantoliano MW, Whitlow M, Wood JF, Rollence ML, Finzel BC, Gilliland GL, Poulos TL, Bryan PN. The engineering of binding affinity at metal ion binding sites for the stabilization of proteins: subtilisin as a test case. Biochemistry. 27: 8311-7. PMID 3072018 DOI: 10.1021/Bi00422A004  0.376
1988 Edwards SL, Kraut J, Poulos TL. Crystal structure of nitric oxide inhibited cytochrome c peroxidase Biochemistry. 27: 8074-8081. PMID 2852951 DOI: 10.1021/Bi00421A016  0.474
1987 Poulos TL, Finzel BC, Howard AJ. High-resolution crystal structure of cytochrome P450cam. Journal of Molecular Biology. 195: 687-700. PMID 3656428 DOI: 10.1016/0022-2836(87)90190-2  0.469
1987 Pantoliano MW, Ladner RC, Bryan PN, Rollence ML, Wood JF, Poulos TL. Protein engineering of subtilisin BPN': enhanced stabilization through the introduction of two cysteines to form a disulfide bond. Biochemistry. 26: 2077-82. PMID 3476160 DOI: 10.1021/Bi00382A002  0.39
1987 Hazzard JT, Poulos TL, Tollin G. Kinetics of reduction by free flavin semiquinones of the components of the cytochrome c-cytochrome c peroxidase complex and intracomplex electron transfer Biochemistry. 26: 2836-2848. PMID 3038167 DOI: 10.1021/Bi00384A027  0.41
1986 Poulos TL, Finzel BC, Howard AJ. Crystal structure of substrate-free Pseudomonas putida cytochrome P-450. Biochemistry. 25: 5314-22. PMID 3768350 DOI: 10.1021/Bi00366A049  0.442
1986 Bryan P, Pantoliano MW, Quill SG, Hsiao HY, Poulos T. Site-directed mutagenesis and the role of the oxyanion hole in subtilisin. Proceedings of the National Academy of Sciences of the United States of America. 83: 3743-5. PMID 3520553 DOI: 10.1073/Pnas.83.11.3743  0.341
1986 Bryan PN, Rollence ML, Pantoliano MW, Wood J, Finzel BC, Gilliland GL, Howard AJ, Poulos TL. Proteases of enhanced stability: characterization of a thermostable variant of subtilisin. Proteins. 1: 326-34. PMID 3329733 DOI: 10.1002/Prot.340010406  0.342
1986 Chance M, Powers L, Poulos T, Chance B. Cytochrome c peroxidase compound ES is identical with horseradish peroxide compound I in iron-ligand distances. Biochemistry. 25: 1266-70. PMID 3008825 DOI: 10.1021/Bi00354A011  0.367
1985 Evangelista-Kirkup R, Crisanti M, Poulos TL, Spiro TG. Resonance Raman spectroscopy shows different temperature-dependent coordination equilibria for native horseradish and cytochrome c peroxidase Febs Letters. 190: 221-226. PMID 2995134 DOI: 10.1016/0014-5793(85)81288-6  0.315
1984 Chance B, Powers L, Ching Y, Poulos T, Schonbaum GR, Yamazaki I, Paul KG. X-ray absorption studies of intermediates in peroxidase activity. Archives of Biochemistry and Biophysics. 235: 596-611. PMID 6097192 DOI: 10.1016/0003-9861(84)90234-0  0.343
1984 Finzel BC, Poulos TL, Kraut J. Crystal structure of yeast cytochrome c peroxidase refined at 1.7-A resolution. The Journal of Biological Chemistry. 259: 13027-36. PMID 6092361 DOI: 10.2210/Pdb2Cyp/Pdb  0.482
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