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Priyadarshi Satpati - Publications

Affiliations: 
IIT Guwahati 
Area:
Computational chemistry
Website:
http://www.iitg.ac.in/psatpati/index.html
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Sarkar T, Ghosh S, Sundaravadivelu PK, Pandit G, Debnath S, Thummer RP, Satpati P, Chatterjee S. Mechanism of Protease Resistance of D-Amino Acid Residue Containing Cationic Antimicrobial Heptapeptides. Acs Infectious Diseases. 10: 562-581. PMID 38294842 DOI: 10.1021/acsinfecdis.3c00491  0.328
2023 Ghosh S, Chatterjee S, Satpati P. Effect of Spacer Length Modification of the Cationic Side Chain on the Energetics of Antimicrobial Peptide Binding to Membrane-Mimetic Bilayers. Journal of Chemical Information and Modeling. PMID 37684221 DOI: 10.1021/acs.jcim.3c01080  0.753
2023 Ghosh S, Sarkar T, Chatterjee S, Satpati P. Bridging Thermodynamics, Antimicrobial Activity, and pH Sensitivity of Cationic Membranolytic Heptapeptides-A Computational and Experimental Study. Journal of Chemical Information and Modeling. PMID 37021489 DOI: 10.1021/acs.jcim.2c01419  0.736
2022 Ghosh S, Chatterjee S, Satpati P. Effect of a monovalent salt on the energetics of an antimicrobial-peptide: micelle dissociation. Physical Chemistry Chemical Physics : Pccp. PMID 36148810 DOI: 10.1039/d2cp02735f  0.766
2022 Ghosh S, Chatterjee S, Satpati P. Effect of Leu/Val Mutation on the Energetics of Antimicrobial Peptide:Micelle Binding. The Journal of Physical Chemistry. B. 126: 5262-5273. PMID 35815580 DOI: 10.1021/acs.jpcb.2c01293  0.749
2022 Debnath S, Ghosh S, Kumar D, Vasudev PG, Satpati P, Chatterjee S. Effect of differential backbone di-substitution of gamma amino acid residues on the conformation and assembly of their Fmoc derivatives in solid and solution states. Chemistry, An Asian Journal. PMID 35603989 DOI: 10.1002/asia.202200356  0.708
2022 Pandit G, Sarkar T, S R V, Debnath S, Satpati P, Chatterjee S. Delineating the Mechanism of Action of a Protease Resistant and Salt Tolerant Synthetic Antimicrobial Peptide against . Acs Omega. 7: 15951-15968. PMID 35571791 DOI: 10.1021/acsomega.2c01089  0.322
2021 Ghosh S, Pandit G, Debnath S, Chatterjee S, Satpati P. Effect of monovalent salt concentration and peptide secondary structure in peptide-micelle binding. Rsc Advances. 11: 36836-36849. PMID 35494385 DOI: 10.1039/d1ra06772a  0.762
2021 Debnath S, Ghosh S, Pandit G, Satpati P, Chatterjee S. Effect of Differential Geminal Substitution of γ Amino Acid Residues at the ( + 2) Position of αγ Turn Segments on the Conformation of Template β-Hairpin Peptides. The Journal of Organic Chemistry. 86: 11310-11323. PMID 34479402 DOI: 10.1021/acs.joc.1c00351  0.716
2021 Ghosh S, Bhattacherjee D, Satpati P, Bhabak KP. Venetoclax: a promising repurposed drug against SARS-CoV-2 main protease. Journal of Biomolecular Structure & Dynamics. 1-12. PMID 34424151 DOI: 10.1080/07391102.2021.1967786  0.697
2021 Ghosh S, Ramarao TA, Samanta PK, Jha A, Satpati P, Sen A. Triazole based isatin derivatives as potential inhibitor of key cancer promoting kinases- insight from electronic structure, docking and molecular dynamics simulations. Journal of Molecular Graphics & Modelling. 107: 107944. PMID 34091175 DOI: 10.1016/j.jmgm.2021.107944  0.703
2020 Akhtar N, Pradhan N, Barik GK, Chatterjee S, Ghosh S, Saha A, Satpati P, Bhattacharyya A, Santra MK, Manna D. Quinine-based Semisynthetic Ion Transporters with Potential Antiproliferative Activities. Acs Applied Materials & Interfaces. PMID 32425038 DOI: 10.1021/Acsami.0C01259  0.684
2020 Kumar A, Satpati P. Mg vs Ca bound active site of group II intron- A MD study. Journal of Molecular Graphics & Modelling. 97: 107546. PMID 32018058 DOI: 10.1016/J.Jmgm.2020.107546  0.313
2020 Pandit G, Biswas K, Ghosh S, Debnath S, Bidkar AP, Satpati P, Bhunia A, Chatterjee S. Rationally designed antimicrobial peptides: Insight into the mechanism of eleven residue peptides against microbial infections. Biochimica Et Biophysica Acta. Biomembranes. 183177. PMID 31954105 DOI: 10.1016/J.Bbamem.2020.183177  0.744
2019 Shukla S, Kumar A, Das D, Satpati P. Principle of DNA recognition by sporulation-regulatory protein (Spo0A) in . Journal of Biomolecular Structure & Dynamics. 1-10. PMID 31760912 DOI: 10.1080/07391102.2019.1696890  0.35
2019 Kumar A, Åqvist J, Satpati P. Principles of tRNA Selection by Alanyl-tRNA Synthetase Based on the Critical G3·U70 Base Pair. Acs Omega. 4: 15539-15548. PMID 31572855 DOI: 10.1021/acsomega.9b01827  0.58
2019 Kumar A, Satpati P. Why double-stranded RNA with 5'-monophosphate is a poor binder to retinoic acid-inducible gene-I with respect to 5'-hydroxyl analogue? Journal of Biomolecular Structure & Dynamics. 1-11. PMID 31543002 DOI: 10.1080/07391102.2019.1671225  0.411
2019 Roy K, Ghosh S, Chetia M, Satpati P, Chatterjee S. Dicyclohexylurea derivatives of amino acids as dye absorbent organogels and anion sensors. Organic & Biomolecular Chemistry. PMID 30816399 DOI: 10.1039/C9Ob00014C  0.716
2019 Lind C, Esguerra M, Jespers W, Satpati P, Gutierrez-de-Terán H, Åqvist J. Free energy calculations of RNA interactions. Methods (San Diego, Calif.). PMID 30794905 DOI: 10.1016/J.Ymeth.2019.02.014  0.586
2018 Pandit G, Ilyas H, Ghosh S, Bidkar AP, Mohid SA, Bhunia A, Satpati P, Chatterjee S. Insights into the Mechanism of Antimicrobial Activity of Seven-Residue Peptides. Journal of Medicinal Chemistry. PMID 30070835 DOI: 10.1021/Acs.Jmedchem.8B00353  0.749
2018 Kumar A, Satpati P. Energetics of Preferential Binding of Retinoic Acid-Inducible Gene-I to Double-Stranded Viral RNAs with 5' Tri-/Diphosphate over 5' Monophosphate. Acs Omega. 3: 3786-3795. PMID 30023880 DOI: 10.1021/acsomega.7b02019  0.36
2018 Kumar A, Satpati P. Principle of K/Na selectivity in the active site of group II intron at various stages of self-splicing pathway. Journal of Molecular Graphics & Modelling. 84: 1-9. PMID 29787928 DOI: 10.1016/J.Jmgm.2018.05.003  0.306
2017 Kumar A, Basu D, Satpati P. Structure Based Energetics of Stop Codon Recognition by Eukaryotic Release Factor. Journal of Chemical Information and Modeling. PMID 28825483 DOI: 10.1021/Acs.Jcim.7B00340  0.392
2015 Simonson T, Aleksandrov A, Satpati P. Electrostatic free energies in translational GTPases: Classic allostery and the rest. Biochimica Et Biophysica Acta. 1850: 1006-16. PMID 25047891 DOI: 10.1016/J.Bbagen.2014.07.006  0.648
2014 Satpati P, Åqvist J. Why base tautomerization does not cause errors in mRNA decoding on the ribosome. Nucleic Acids Research. 42: 12876-84. PMID 25352546 DOI: 10.1093/Nar/Gku1044  0.565
2014 Satpati P, Bauer P, Aqvist J. Energetic tuning by tRNA modifications ensures correct decoding of isoleucine and methionine on the ribosome. Chemistry (Weinheim An Der Bergstrasse, Germany). 20: 10271-5. PMID 25043149 DOI: 10.1002/Chem.201404016  0.556
2014 Satpati P, Sund J, Aqvist J. Structure-based energetics of mRNA decoding on the ribosome. Biochemistry. 53: 1714-22. PMID 24564511 DOI: 10.1021/Bi5000355  0.587
2013 Simonson T, Satpati P. Simulating GTP:Mg and GDP:Mg with a simple force field: a structural and thermodynamic analysis. Journal of Computational Chemistry. 34: 836-46. PMID 23280996 DOI: 10.1002/Jcc.23207  0.606
2012 Simonson T, Satpati P. Nucleotide recognition by the initiation factor aIF5B: free energy simulations of a neoclassical GTPase. Proteins. 80: 2742-57. PMID 22887821 DOI: 10.1002/Prot.24158  0.602
2012 Satpati P, Simonson T. Conformational selection through electrostatics: Free energy simulations of GTP and GDP binding to archaeal initiation factor 2. Proteins. 80: 1264-82. PMID 22275120 DOI: 10.1002/Prot.24023  0.654
2012 Satpati P, Simonson T. Conformational selection by the aIF2 GTPase: a molecular dynamics study of functional pathways. Biochemistry. 51: 353-61. PMID 22165972 DOI: 10.1021/Bi201675N  0.621
2011 Satpati P, Clavaguéra C, Ohanessian G, Simonson T. Free energy simulations of a GTPase: GTP and GDP binding to archaeal initiation factor 2. The Journal of Physical Chemistry. B. 115: 6749-63. PMID 21534562 DOI: 10.1021/Jp201934P  0.622
2011 Satpati P, Clavaguéra C, Ohanessian G, Simonson T. Free energy simulations of a GTPase: GTP and GDP binding to archaeal initiation factor 2 Journal of Physical Chemistry B. 115: 6749-6763. DOI: 10.1021/jp201934p  0.568
2008 Satpati P, Sebastian KL. Stabilization of an all-metal antiaromatic molecule (Al4Li4) using BH and C as caps. Inorganic Chemistry. 47: 2098-102. PMID 18260627 DOI: 10.1021/Ic701040G  0.563
2007 Satpati P, Sebastian KL. Tunneling of three borons in a B12 cluster Journal of Molecular Structure: Theochem. 823: 74-77. DOI: 10.1016/J.Theochem.2007.08.009  0.533
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