| Year |
Citation |
Score |
| 2020 |
Fernandez K, D'Souza S, Ahn JJ, Singh S, Bacasen EM, Mashiach D, Mishail D, Kao T, Thai J, Hwang S, Yaramada L, Miller JH. Mutations induced by Bleomycin, 4-nitroquinoline-1-oxide, and hydrogen peroxide in the rpoB gene of Escherichia coli: Perspective on Mutational Hotspots. Mutation Research. 821: 111702. PMID 32422468 DOI: 10.1016/j.mrfmmm.2020.111702 |
0.331 |
|
| 2013 |
Yang H, Yung M, Li L, Hoch JA, Ryan CM, Kar UK, Souda P, Whitelegge JP, Miller JH. Evidence that YycJ is a novel 5'-3' double-stranded DNA exonuclease acting in Bacillus anthracis mismatch repair. Dna Repair. 12: 334-46. PMID 23491602 DOI: 10.1016/j.dnarep.2013.02.002 |
0.304 |
|
| 2011 |
Bush K, Courvalin P, Dantas G, Davies J, Eisenstein B, Huovinen P, Jacoby GA, Kishony R, Kreiswirth BN, Kutter E, Lerner SA, Levy S, Lewis K, Lomovskaya O, Miller JH, et al. Tackling antibiotic resistance. Nature Reviews. Microbiology. 9: 894-6. PMID 22048738 DOI: 10.1038/Nrmicro2693 |
0.34 |
|
| 2011 |
Yang H, Yung M, Sikavi C, Miller JH. The role of Bacillus anthracis RecD2 helicase in DNA mismatch repair. Dna Repair. 10: 1121-30. PMID 21940221 DOI: 10.1016/j.dnarep.2011.08.009 |
0.329 |
|
| 2008 |
Yang H, Miller JH. Deletion of dnaN1 generates a mutator phenotype in Bacillus anthracis. Dna Repair. 7: 507-14. PMID 18242150 DOI: 10.1016/j.dnarep.2007.10.003 |
0.344 |
|
| 2006 |
Yang H, To KH, Aguila SJ, Miller JH. Metagenomic DNA fragments that affect Escherichia coli mutational pathways. Molecular Microbiology. 61: 960-77. PMID 16879649 DOI: 10.1111/j.1365-2958.2006.05268.x |
0.348 |
|
| 2005 |
Gabrovsky V, Yamamoto ML, Miller JH. Mutator effects in Escherichia coli caused by the expression of specific foreign genes. Journal of Bacteriology. 187: 5044-8. PMID 15995226 DOI: 10.1128/JB.187.14.5044-5048.2005 |
0.319 |
|
| 2004 |
Yang H, Wolff E, Kim M, Diep A, Miller JH. Identification of mutator genes and mutational pathways in Escherichia coli using a multicopy cloning approach Molecular Microbiology. 53: 283-295. PMID 15225322 DOI: 10.1111/j.1365-2958.2004.04125.x |
0.365 |
|
| 2003 |
Garibyan L, Huang T, Kim M, Wolff E, Nguyen A, Nguyen T, Diep A, Hu K, Iverson A, Yang H, Miller JH. Use of the rpoB gene to determine the specificity of base substitution mutations on the Escherichia coli chromosome Dna Repair. 2: 593-608. PMID 12713816 DOI: 10.1016/S1568-7864(03)00024-7 |
0.301 |
|
| 2002 |
Sartori AA, Fitz-Gibbon S, Yang H, Miller JH, Jiricny J. A novel uracil-DNA glycosylase with broad substrate specificity and an unusual active site. The Embo Journal. 21: 3182-91. PMID 12065430 DOI: 10.1093/emboj/cdf309 |
0.625 |
|
| 2002 |
Yang H, Chiang JH, Fitz-Gibbon S, Lebel M, Sartori AA, Jiricny J, Slupska MM, Miller JH. Direct interaction between uracil-DNA glycosylase and a proliferating cell nuclear antigen homolog in the crenarchaeon Pyrobaculum aerophilum. The Journal of Biological Chemistry. 277: 22271-8. PMID 11927597 DOI: 10.1074/Jbc.M201820200 |
0.65 |
|
| 2002 |
Fitz-Gibbon ST, Ladner H, Kim UJ, Stetter KO, Simon MI, Miller JH. Genome sequence of the hyperthermophilic crenarchaeon Pyrobaculum aerophilum. Proceedings of the National Academy of Sciences of the United States of America. 99: 984-9. PMID 11792869 DOI: 10.1073/pnas.241636498 |
0.679 |
|
| 2001 |
Sartori AA, Schär P, Fitz-Gibbon S, Miller JH, Jiricny J. Biochemical characterization of uracil processing activities in the hyperthermophilic archaeon Pyrobaculum aerophilum. The Journal of Biological Chemistry. 276: 29979-86. PMID 11399761 DOI: 10.1074/Jbc.M102985200 |
0.65 |
|
| 2001 |
Slupska MM, King AG, Fitz-Gibbon S, Besemer J, Borodovsky M, Miller JH. Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum. Journal of Molecular Biology. 309: 347-60. PMID 11371158 DOI: 10.1006/Jmbi.2001.4669 |
0.695 |
|
| 2001 |
Yang H, Phan IT, Fitz-Gibbon S, Shivji MK, Wood RD, Clendenin WM, Hyman EC, Miller JH. A thermostable endonuclease III homolog from the archaeon Pyrobaculum aerophilum. Nucleic Acids Research. 29: 604-13. PMID 11160880 DOI: 10.1093/Nar/29.3.604 |
0.307 |
|
| 2000 |
Yang H, Slupska MM, Wei YF, Tai JH, Luther WM, Xia YR, Shih DM, Chiang JH, Baikalov C, Fitz-Gibbon S, Phan IT, Conrad A, Miller JH. Cloning and characterization of a new member of the Nudix hydrolases from human and mouse. The Journal of Biological Chemistry. 275: 8844-53. PMID 10722730 DOI: 10.1074/Jbc.275.12.8844 |
0.649 |
|
| 2000 |
Mallick P, Goodwill KE, Fitz-Gibbon S, Miller JH, Eisenberg D. Selecting protein targets for structural genomics of Pyrobaculum aerophilum: validating automated fold assignment methods by using binary hypothesis testing. Proceedings of the National Academy of Sciences of the United States of America. 97: 2450-5. PMID 10706641 DOI: 10.1073/Pnas.050589297 |
0.633 |
|
| 2000 |
Yang H, Fitz-Gibbon S, Marcotte EM, Tai JH, Hyman EC, Miller JH. Characterization of a thermostable DNA glycosylase specific for U/G and T/G mismatches from the hyperthermophilic archaeon Pyrobaculum aerophilum. Journal of Bacteriology. 182: 1272-9. PMID 10671447 DOI: 10.1128/Jb.182.5.1272-1279.2000 |
0.665 |
|
| 1999 |
Drozdowicz YM, Lu YP, Patel V, Fitz-Gibbon S, Miller JH, Rea PA. A thermostable vacuolar-type membrane pyrophosphatase from the archaeon Pyrobaculum aerophilum: implications for the origins of pyrophosphate-energized pumps. Febs Letters. 460: 505-12. PMID 10556526 DOI: 10.1016/S0014-5793(99)01404-0 |
0.608 |
|
| 1999 |
Henninger T, Anemüller S, Fitz-Gibbon S, Miller JH, Schäfer G, Schmidt CL. A novel Rieske iron-sulfur protein from the hyperthermophilic crenarchaeon Pyrobaculum aerophilum: sequencing of the gene, expression in E. coli and characterization of the protein. Journal of Bioenergetics and Biomembranes. 31: 119-28. PMID 10449238 DOI: 10.1023/A:1005447710894 |
0.301 |
|
| 1997 |
Fitz-Gibbon S, Choi AJ, Miller JH, Stetter KO, Simon MI, Swanson R, Kim UJ. A fosmid-based genomic map and identification of 474 genes of the hyperthermophilic archaeon Pyrobaculum aerophilum. Extremophiles : Life Under Extreme Conditions. 1: 36-51. PMID 9680335 DOI: 10.1007/S007920050013 |
0.67 |
|
| 1996 |
Völkl P, Markiewicz P, Baikalov C, Fitz-Gibbon S, Stetter KO, Miller JH. Genomic and cDNA sequence tags of the hyperthermophilic archaeon Pyrobaculum aerophilum. Nucleic Acids Research. 24: 4373-8. PMID 8948626 DOI: 10.1093/Nar/24.22.4373 |
0.681 |
|
| 1989 |
Hsia HC, Lebkowski JS, Leong PM, Calos MP, Miller JH. Comparison of ultraviolet irradiation-induced mutagenesis of the lacI gene in Escherichia coli and in human 293 cells. Journal of Molecular Biology. 205: 103-13. PMID 2647996 DOI: 10.1016/0022-2836(89)90368-9 |
0.595 |
|
| 1987 |
DuBridge RB, Tang P, Hsia HC, Leong PM, Miller JH, Calos MP. Analysis of mutation in human cells by using an Epstein-Barr virus shuttle system. Molecular and Cellular Biology. 7: 379-87. PMID 3031469 DOI: 10.1128/Mcb.7.1.379 |
0.603 |
|
| 1986 |
Lebkowski JS, Miller JH, Calos MP. Determination of DNA sequence changes induced by ethyl methanesulfonate in human cells, using a shuttle vector system. Molecular and Cellular Biology. 6: 1838-42. PMID 3023907 DOI: 10.1128/Mcb.6.5.1838 |
0.65 |
|
| 1985 |
Lebkowski JS, Clancy S, Miller JH, Calos MP. The lacI shuttle: rapid analysis of the mutagenic specificity of ultraviolet light in human cells. Proceedings of the National Academy of Sciences of the United States of America. 82: 8606-10. PMID 3001711 DOI: 10.1073/Pnas.82.24.8606 |
0.601 |
|
| 1984 |
Miller JH, Lebkowski JS, Greisen KS, Calos MP. Specificity of mutations induced in transfected DNA by mammalian cells. The Embo Journal. 3: 3117-21. PMID 6098464 |
0.306 |
|
| 1984 |
Miller J, Lebkowski J, Greisen K, Calos M. Specificity of mutations induced in transfected DNA by mammalian cells. The Embo Journal. 3: 3117-3121. DOI: 10.1002/J.1460-2075.1984.Tb02267.X |
0.64 |
|
| 1983 |
Miller JH, Albertini AM. Effects of surrounding sequence on the suppression of nonsense codons. Journal of Molecular Biology. 164: 59-71. PMID 6188840 DOI: 10.1016/0022-2836(83)90087-6 |
0.427 |
|
| 1982 |
Albertini AM, Hofer M, Calos MP, Tlsty TD, Miller JH. Analysis of spontaneous deletions and gene amplification in the lac region of Escherichia coli Cold Spring Harbor Symposia On Quantitative Biology. 47: 841-850. PMID 6345079 DOI: 10.1101/Sqb.1983.047.01.096 |
0.631 |
|
| 1982 |
Albertini AM, Hofer M, Calos MP, Miller JH. On the formation of spontaneous deletions: the importance of short sequence homologies in the generation of large deletions. Cell. 29: 319-28. PMID 6288254 DOI: 10.1016/0092-8674(82)90148-9 |
0.661 |
|
| 1981 |
Miller JH, Calos MP, Combépine C, Hofer M. Further correlations of the lacI genetic map with the DNA sequence. Journal of Molecular Biology. 153: 65-6. PMID 7040680 DOI: 10.1016/0022-2836(81)90526-X |
0.587 |
|
| 1981 |
Calos MP, Miller JH. Genetic and sequence analysis of frameshift mutations induced by ICR-191. Journal of Molecular Biology. 153: 39-64. PMID 7040679 DOI: 10.1016/0022-2836(81)90525-8 |
0.644 |
|
| 1981 |
Calos MP, Miller JH. The DNA sequence change resulting from the IQ1 mutation, which greatly increases promoter strength. Molecular & General Genetics : Mgg. 183: 559-60. PMID 7038381 DOI: 10.1007/Bf00268783 |
0.668 |
|
| 1981 |
Miller JH, Calos MP, Galas DJ. Genetic and sequencing studies of the specificity of transposition into the lac region of E. coli. Cold Spring Harbor Symposia On Quantitative Biology. 45: 243-57. PMID 6271472 DOI: 10.1101/Sqb.1981.045.01.037 |
0.623 |
|
| 1980 |
Duncan BK, Miller JH. Mutagenic deamination of cytosine residues in DNA Nature. 287: 560-561. PMID 6999365 DOI: 10.1038/287560A0 |
0.373 |
|
| 1980 |
Calos MP, Miller JH. DNA sequence alteration resulting from a mutation impairing promoter function in the lac repressor gene. Molecular & General Genetics : Mgg. 178: 225-7. PMID 6770231 DOI: 10.1007/Bf00267233 |
0.676 |
|
| 1980 |
Galas DJ, Calos MP, Miller JH. Sequence analysis of Tn9 insertions in the lacZ gene. Journal of Molecular Biology. 144: 19-41. PMID 6260963 DOI: 10.1016/0022-2836(80)90213-2 |
0.663 |
|
| 1980 |
Miller JH, Calos MP, Galas D, Hofer M, Büchel DE, Müller-Hill B. Genetic analysis of transpositions in the lac region of Escherichia coli. Journal of Molecular Biology. 144: 1-18. PMID 6260962 DOI: 10.1016/0022-2836(80)90212-0 |
0.654 |
|
| 1980 |
Calos MP, Miller JH. Transposable elements. Cell. 20: 579-95. PMID 6251969 DOI: 10.1016/0092-8674(80)90305-0 |
0.49 |
|
| 1980 |
Calos MP, Miller JH. Molecular consequences of deletion formation mediated by the transposon Tn9. Nature. 285: 38-41. PMID 6246435 DOI: 10.1038/285038A0 |
0.674 |
|
| 1980 |
Miller JH, Reznikoff WS. Preface/Front Matter Cold Spring Harbor Monograph Archive. 7. DOI: 10.1101/087969133.7.I |
0.558 |
|
| 1980 |
Miller JH. The lacI Gene: Its Role in lac Operon Control and Its Use as a Genetic System Cold Spring Harbor Monograph Archive. 7: 31-88. DOI: 10.1101/087969133.7.31 |
0.356 |
|
| 1979 |
Miller JH. Genetic studies of the lac repressor. XI. On aspects of lac repressor structure suggested by genetic experiments Journal of Molecular Biology. 131. PMID 385891 DOI: 10.1016/0022-2836(79)90075-5 |
0.396 |
|
| 1979 |
Miller JH, Coulondre C, Hofer M, Schmeissner U, Sommer H, Schmitz A, Lu P. Genetic studies of the lac repressor. IX. Generation of altered proteins by the suppression of nonsence mutations Journal of Molecular Biology. 131: 191-218,IN1-IN4,219-. PMID 385890 DOI: 10.1016/0022-2836(79)90073-1 |
0.367 |
|
| 1979 |
Calos M, Johnsrud L, Miller JH. A genetic and sequencing study of IS1 and Tn9 insertions in the Escherichia coli lac operon. Cold Spring Harbor Symposia On Quantitative Biology. 1263-8. PMID 385226 DOI: 10.1101/Sqb.1979.043.01.143 |
0.638 |
|
| 1979 |
Farabaugh PJ, Schmeissner U, Hofer M, Miller JH. Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacI gene of Escherichia coli. Journal of Molecular Biology. 126: 847-57. PMID 370408 DOI: 10.1016/0022-2836(78)90023-2 |
0.435 |
|
| 1979 |
Miller JH, Schmeissner U. Genetic studies of the lac repressor. X. Analysis of missense mutations in the lacI gene. Journal of Molecular Biology. 131: 223-248. PMID 114666 DOI: 10.1016/0022-2836(79)90074-3 |
0.409 |
|
| 1978 |
Schmeissner U, Ganem D, Miller JH. Revised gene-protein map for the lacI gene-lac repressor system. Journal of Molecular Biology. 117: 572-5. PMID 609097 DOI: 10.1016/0022-2836(77)90058-4 |
0.333 |
|
| 1978 |
Calos MP, Galas D, Miller JH. Genetic studies of the lac repressor. VIII. DNA sequence change resulting from an intragenic duplication. Journal of Molecular Biology. 126: 865-9. PMID 370410 DOI: 10.1016/0022-2836(78)90025-6 |
0.638 |
|
| 1978 |
Johnsrud L, Calos MP, Miller JH. The transposon Tn9 generates a 9 bp repeated sequence during integration. Cell. 15: 1209-19. PMID 365355 DOI: 10.1016/0092-8674(78)90047-8 |
0.666 |
|
| 1978 |
Coulondre C, Miller JH, Farabaugh PJ, Gilbert W. Molecular basis of base substitution hotspots in Escherichia coli. Nature. 274: 775-80. PMID 355893 DOI: 10.1038/274775A0 |
0.569 |
|
| 1978 |
Miller JH, Coulondre C, Farabaugh PJ. Correlation of nonsense sites in the lacI gene with specific codons in the nucleotide sequence. Nature. 274: 770-5. PMID 355892 DOI: 10.1038/274770A0 |
0.475 |
|
| 1978 |
Calos MP, Johnsrud L, Miller JH. DNA sequence at the integration sites of the insertion element IS1. Cell. 13: 411-8. PMID 350411 DOI: 10.1016/0092-8674(78)90315-X |
0.685 |
|
| 1978 |
Schmitz A, Coulondre C, Miller JH. Genetic studies of the lac repressor. V. Repressors which bind operator more tightly generated by suppression and reversion of nonsense mutations. Journal of Molecular Biology. 123: 431-454. PMID 211238 DOI: 10.1016/0022-2836(78)90089-X |
0.358 |
|
| 1978 |
Sommer H, Schmitz A, Schmeissner U, Miller JH, Wittmann H. Genetic studies of the lac repressor: VI. The B116 repressor: An altered lac repressor containing amino acids specified by both the trp and lacI leader regions Journal of Molecular Biology. 123: 457-469. DOI: 10.1016/0022-2836(78)90090-6 |
0.379 |
|
| 1977 |
Schmeissner U, Ganem D, Miller JH. Genetic studies of the lac repressor. II. Fine structure deletion map of the lacI gene, and its correlation with the physical map. Journal of Molecular Biology. 109: 303-26. PMID 839544 DOI: 10.1016/S0022-2836(77)80036-3 |
0.351 |
|
| 1977 |
Miller JH, Ganem D, Lu P, Schmitz A. Genetic studies of the lac repressor. I. Correlation of mutational sites with specific amino acid residues: Construction of a colinear gene-protein map Journal of Molecular Biology. 109: 275-298. PMID 839542 DOI: 10.1016/S0022-2836(77)80034-X |
0.433 |
|
| 1977 |
Coulondre C, Miller JH. Genetic studies of the lac repressor: III. Additional correlation of mutational sites with specific amino acid residues Journal of Molecular Biology. 117: 525-567. PMID 609095 DOI: 10.1016/0022-2836(77)90056-0 |
0.398 |
|
| 1977 |
Coulondre C, Miller JH. Genetic studies of the lac repressor: IV. Mutagenic specificity in the lacI gene of Escherichia coli Journal of Molecular Biology. 117: 577-606. PMID 416218 DOI: 10.1016/0022-2836(77)90059-6 |
0.34 |
|
| 1976 |
Celis JE, Coulondre C, Miller JH. Suppressor su+7 inserts tryptophan in addition to glutamine. Journal of Molecular Biology. 104: 729-734. PMID 781298 DOI: 10.1016/0022-2836(76)90132-7 |
0.306 |
|
| 1976 |
Miller JH, Claeys IV, Kirschbaum JB, Nasi S, Elsacker Svd, Molholt B, Gross G, Fields DA, Bautz EKF. Altered RNA Polymerases Resulting from Temperature-sensitive Mutations in the rif Region of the E. coli Chromosome Cold Spring Harbor Monograph Archive. 6: 519-538. DOI: 10.1101/087969115.6.519 |
0.364 |
|
| 1975 |
Files JG, Weber K, Coulondre C, Miller JH. Identification of the UUG codon as a translational initiation codon in vivo Journal of Molecular Biology. 95: 327-330. PMID 1102708 DOI: 10.1016/0022-2836(75)90398-8 |
0.42 |
|
| 1974 |
Gho D, Miller JH. Deletions fusing the i and lac regions of the chromosome in E. coli: isolation and mapping. Molecular Genetics and Genomics. 131: 137-146. PMID 4609219 DOI: 10.1007/Bf00266149 |
0.405 |
|
| 1970 |
Miller JH, Reznikoff WS, Silverstone AE, Ippen K, Signer ER, Beckwith JR. Fusions of the lac and trp Regions of the Escherichia coli Chromosome. Journal of Bacteriology. 104: 1273-9. PMID 16559103 DOI: 10.1128/Jb.104.3.1273-1279.1970 |
0.659 |
|
| 1970 |
Platt T, Miller JH, Weber K. In vivo degradation of mutant lac repressor Nature. 228: 1154-1156. PMID 4922498 DOI: 10.1038/2281154A0 |
0.313 |
|
| 1970 |
Miller JH, Platt T, Weber K. Research Article 10: Strains with the Promoter Deletion L1 Synthesize An Altered lac Repressor Cold Spring Harbor Monograph Archive. 1: 343-351. DOI: 10.1101/087969100.1.343 |
0.319 |
|
| 1970 |
Miller JH. Chapter VIII: Transcription Starts and Stops in the lac Operon Cold Spring Harbor Monograph Archive. 1: 173-188. DOI: 10.1101/087969100.1.173 |
0.305 |
|
| 1969 |
Reznikoff WS, Miller JH, Scaife JG, Beckwith JR. A mechanism for repressor action. Journal of Molecular Biology. 43: 201-13. PMID 4897791 DOI: 10.1016/0022-2836(69)90089-8 |
0.679 |
|
| 1969 |
Silverstone AE, Magasanik B, Reznikoff WS, Miller JH, Beckwith JR. Catabolite sensitive site of the lac operon. Nature. 221: 1012-4. PMID 4886742 DOI: 10.1038/2211012B0 |
0.662 |
|
| 1968 |
Miller JH, Ippen K, Scaife JG, Beckwith JR. The promoter-operator region of the lac operon of Escherichia coli. Journal of Molecular Biology. 38: 413-20. PMID 4887877 DOI: 10.1016/0022-2836(68)90395-1 |
0.586 |
|
| 1968 |
Miller JH, Beckwith J, Muller-Hill B. Direction of transcription of a regulatory gene in E. coli. Nature. 220: 1287-90. PMID 4882916 DOI: 10.1038/2201287A0 |
0.608 |
|
| 1968 |
Ippen K, Miller JH, Scaife J, Beckwith J. New controlling element in the Lac operon of E. coli. Nature. 217: 825-7. PMID 4867974 DOI: 10.1038/217825A0 |
0.568 |
|
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