Ryan N. Gutenkunst, Ph.D.

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2008 Cornell University, Ithaca, NY, United States 
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"Ryan Gutenkunst"
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James Sethna grad student 2008 Cornell
 (Sloppiness, modeling, and evolution in biochemical networks.)
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Publications

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Ragsdale AP, Coffman AJ, Hsieh P, et al. (2016) Triallelic Population Genomics for Inferring Correlated Fitness Effects of Same Site Nonsynonymous Mutations. Genetics
Hsieh P, Veeramah KR, Lachance J, et al. (2016) Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection. Genome Research
Coffman AJ, Hsieh P, Gravel S, et al. (2015) Computationally efficient composite likelihood statistics for demographic inference. Molecular Biology and Evolution
Hermansen RA, Mannakee BK, Knecht W, et al. (2015) Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast. Bmc Evolutionary Biology. 15: 232
Pandya S, Struck TJ, Mannakee BK, et al. (2015) Testing whether metazoan tyrosine loss was driven by selection against promiscuous phosphorylation. Molecular Biology and Evolution. 32: 144-52
Robinson JD, Coffman AJ, Hickerson MJ, et al. (2014) Sampling strategies for frequency spectrum-based population genomic inference. Bmc Evolutionary Biology. 14: 254
Holmes WM, Mannakee BK, Gutenkunst RN, et al. (2014) Loss of amino-terminal acetylation suppresses a prion phenotype by modulating global protein folding. Nature Communications. 5: 4383
Veeramah KR, Gutenkunst RN, Woerner AE, et al. (2014) Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans. Molecular Biology and Evolution. 31: 2267-82
Jilkine A, Gutenkunst RN. (2014) Effect of dedifferentiation on time to mutation acquisition in stem cell-driven cancers. Plos Computational Biology. 10: e1003481
Ma X, Kelley JL, Eilertson K, et al. (2013) Population genomic analysis reveals a rich speciation and demographic history of orang-utans (Pongo pygmaeus and Pongo abelii). Plos One. 8: e77175
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