Shoehei Koide
Affiliations: | University of Rochester, Rochester, NY |
Area:
General BiophysicsGoogle:
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Publications
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| Ludwicki MB, Li J, Stephens EA, et al. (2019) Broad-Spectrum Proteome Editing with an Engineered Bacterial Ubiquitin Ligase Mimic. Acs Central Science. 5: 852-866 |
| Kawano K, Koide S, Imamura C. (2019) Seq2seq Fingerprint with Byte-Pair Encoding for Predicting Changes in Protein Stability upon Single Point Mutation. Ieee/Acm Transactions On Computational Biology and Bioinformatics |
| Makabe K, Nakamura T, Dhar D, et al. (2018) An overlapping region between the two terminal folding units of the outer surface protein A (OspA) controls its folding behavior. Journal of Molecular Biology |
| Sha F, Salzman G, Gupta A, et al. (2017) Monobodies and Other Synthetic Binding Proteins for Expanding Protein Science. Protein Science : a Publication of the Protein Society |
| Paduch M, Koide A, Uysal S, et al. (2013) Generating conformation-specific synthetic antibodies to trap proteins in selected functional states. Methods (San Diego, Calif.). 60: 3-14 |
| Koide S, Koide A, Lipovšek D. (2012) Target-binding proteins based on the 10th human fibronectin type III domain (¹⁰Fn3). Methods in Enzymology. 503: 135-56 |
| Koide A, Wojcik J, Gilbreth RN, et al. (2012) Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold. Journal of Molecular Biology. 415: 393-405 |
| Koide A, Wojcik J, Gilbreth RN, et al. (2009) Accelerating phage-display library selection by reversible and site-specific biotinylation. Protein Engineering, Design & Selection : Peds. 22: 685-90 |
| Koide S. (2009) Generation of new protein functions by nonhomologous combinations and rearrangements of domains and modules. Current Opinion in Biotechnology. 20: 398-404 |
| Huang J, Makabe K, Biancalana M, et al. (2009) Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution. Journal of Molecular Biology. 392: 1221-31 |