Cecilia Clementi

Affiliations: 
Rice University, Houston, TX 
Area:
General Biophysics
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"Cecilia Clementi"
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Publications

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Abella JR, Antunes D, Jackson K, et al. (2020) Markov state modeling reveals alternative unbinding pathways for peptide-MHC complexes. Proceedings of the National Academy of Sciences of the United States of America
Abella JR, Antunes DA, Clementi C, et al. (2020) Large-Scale Structure-Based Prediction of Stable Peptide Binding to Class I HLAs Using Random Forests. Frontiers in Immunology. 11: 1583
Abella JR, Antunes DA, Clementi C, et al. (2019) APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC Conformations. Molecules (Basel, Switzerland). 24
Hruska E, Abella JR, Nüske F, et al. (2018) Quantitative comparison of adaptive sampling methods for protein dynamics. The Journal of Chemical Physics. 149: 244119
Agarwal A, Clementi C, Delle Site L. (2017) Path integral-GC-AdResS simulation of a large hydrophobic solute in water: a tool to investigate the interplay between local microscopic structures and quantum delocalization of atoms in space. Physical Chemistry Chemical Physics : Pccp
Boareto M, Jolly MK, Lu M, et al. (2015) Jagged-Delta asymmetry in Notch signaling can give rise to a Sender/Receiver hybrid phenotype. Proceedings of the National Academy of Sciences of the United States of America. 112: E402-9
Jolly MK, Boareto M, Lu M, et al. (2015) Operating principles of Notch-Delta-Jagged module of cell-cell communication New Journal of Physics. 17
Cazade PA, Zheng W, Prada-Gracia D, et al. (2015) A comparative analysis of clustering algorithms: O2 migration in truncated hemoglobin i from transition networks Journal of Chemical Physics. 142
A. Rohrdanz M, Zheng W, Lambeth B, et al. (2014) Multiscale Approach to the Determination of the Photoactive Yellow Protein Signaling State Ensemble Plos Computational Biology. 10
Sambasivan R, Zheng W, Burya SJ, et al. (2014) A tripodal peptide ligand for asymmetric Rh(ii) catalysis highlights unique features of on-bead catalyst development Chemical Science. 5: 1401-1407
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