José Nelson Onuchic

Affiliations: 
1990-2011 Physics University of California, San Diego, La Jolla, CA 
 2011- Physics Rice University, Houston, TX 
Area:
Theoretical Biological Physics
Website:
https://chemistry.rice.edu/FacultyDetail.aspx?p=51BE2F2C673C5991
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"José Nelson Onuchic"
Bio:

http://www.nasonline.org/member-directory/members/3012188.html
DOI: 10.1073/pnas.1007425107
http://www.cprit.state.tx.us/funded-grants/cprit-scholars/dr-jose-onuchic
Onuchic, Jose Nelson New aspects of the theory of electron transfer reaction dynamics. Dissertation (Ph.D.), California Institute of Technology (1987).

Mean distance: 11.56
 
SNBCP
Cross-listing: Chemistry Tree

Parents

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John J. Hopfield grad student 1987 Caltech
 (New aspects of the theory of electron transfer reaction dynamics)

Children

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Peter Leopold grad student UCSD Physics (Chemistry Tree)
Zhipeng Wang grad student (Computational Biology Tree)
Weiqi Lu grad student 2017- Rice University (Computational Biology Tree)
Vitor Barbanti Pereira Leite grad student 1989-1995 UCSD
Hugh Nymeyer grad student 2001 UCSD
Tongye Shen grad student 2002 UCSD
Margaret Shun Cheung grad student 2003 UCSD
Leslie Lou Chavez grad student 2005 UCSD
Sichun Yang grad student 2006 UCSD
Paul Charles Whitford grad student 2009 UCSD
Jeffrey Kenneth Noel grad student 2012 UCSD
Joan-Emma Shea post-doc (Chemistry Tree)
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Publications

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Jia D, Lu M, Jung KH, et al. (2019) Elucidating cancer metabolic plasticity by coupling gene regulation with metabolic pathways. Proceedings of the National Academy of Sciences of the United States of America
Mandic A, Hayes RL, Lammert H, et al. (2019) Structure-Based Model of RNA Pseudoknot Captures Magnesium-dependent Folding Thermodynamics. The Journal of Physical Chemistry. B
Roy S, Hennelly SP, Lammert H, et al. (2019) Magnesium controls aptamer-expression platform switching in the SAM-I riboswitch. Nucleic Acids Research
Nir G, Farabella I, Pérez Estrada C, et al. (2018) Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling. Plos Genetics. 14: e1007872
Jia D, George J, Tripathi S, et al. (2018) Testing the gene expression classification of the EMT spectrum. Physical Biology
Krepel D, Cheng RR, Di Pierro M, et al. (2018) Deciphering the structure of the condensin protein complex. Proceedings of the National Academy of Sciences of the United States of America
Dutta M, Diehl MR, Onuchic JN, et al. (2018) Structural consequences of hereditary spastic paraplegia disease-related mutations in kinesin. Proceedings of the National Academy of Sciences of the United States of America
Vian L, Pękowska A, Rao SSP, et al. (2018) The Energetics and Physiological Impact of Cohesin Extrusion. Cell. 175: 292-294
Chen M, Lin X, Lu W, et al. (2018) Template-Guided Protein Structure Prediction and Refinement Using Optimized Folding Landscape Force Fields. Journal of Chemical Theory and Computation
Wang Q, Jana B, Diehl MR, et al. (2018) Molecular mechanisms of the interhead coordination by interhead tension in cytoplasmic dyneins. Proceedings of the National Academy of Sciences of the United States of America
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