José Nelson Onuchic

Affiliations: 
1990-2011 Physics University of California, San Diego, La Jolla, CA 
 2011- Physics Rice University, Houston, TX 
Area:
Theoretical Biological Physics
Website:
https://chemistry.rice.edu/FacultyDetail.aspx?p=51BE2F2C673C5991
Google:
"José Nelson Onuchic"
Bio:

http://www.nasonline.org/member-directory/members/3012188.html
DOI: 10.1073/pnas.1007425107
https://history.aip.org/phn/11607030.html
http://www.cprit.state.tx.us/funded-grants/cprit-scholars/dr-jose-onuchic
Onuchic, Jose Nelson New aspects of the theory of electron transfer reaction dynamics. Dissertation (Ph.D.), California Institute of Technology (1987).

Mean distance: 11.56
 
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Cross-listing: Chemistry Tree

Parents

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John J. Hopfield grad student 1987 Caltech
 (New aspects of the theory of electron transfer reaction dynamics)

Children

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Peter Leopold grad student UCSD (Chemistry Tree)
Zhipeng Wang grad student (Computational Biology Tree)
Kareem M Mehrabiani grad student 2015- Rice University
Weiqi Lu grad student 2017- Rice University (Computational Biology Tree)
Vitor Barbanti Pereira Leite grad student 1989-1995 UCSD
Marcos R Betancourt grad student 1992-1995 Rice University
Hugh Nymeyer grad student 2001 UCSD
Tongye Shen grad student 2002 UCSD
Margaret Shun Cheung grad student 2003 UCSD
Leslie Lou Chavez grad student 2005 UCSD
Sichun Yang grad student 2006 UCSD
Paul Charles Whitford grad student 2009 UCSD
Jeffrey Kenneth Noel grad student 2012 UCSD
Xingcheng Lin grad student 2012-2018 Rice University
Joan-Emma Shea post-doc 1997-2000 Scripps Research Institute (Chemistry Tree)
Changbong Hyeon post-doc 2006-2007 UCSD (Chemistry Tree)
Biman Jana post-doc 2011-2013 Rice University (Chemistry Tree)
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Publications

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Sarkar R, Jaiswar A, Hennelly SP, et al. (2021) Chelated Magnesium Logic Gate Regulates Riboswitch Pseudoknot Formation. The Journal of Physical Chemistry. B
Hoencamp C, Dudchenko O, Elbatsh AMO, et al. (2021) 3D genomics across the tree of life reveals condensin II as a determinant of architecture type. Science (New York, N.Y.). 372: 984-989
Ngo K, Bruno da Silva F, Leite VBP, et al. (2021) Improving the Thermostability of Xylanase A from by Combining Bioinformatics and Electrostatic Interactions Optimization. The Journal of Physical Chemistry. B
Oliveira Junior AB, Lin X, Kulkarni P, et al. (2021) Exploring Energy Landscapes of Intrinsically Disordered Proteins: Insights into Functional Mechanisms. Journal of Chemical Theory and Computation
Jia D, Park JH, Kaur H, et al. (2021) Towards decoding the coupled decision-making of metabolism and epithelial-to-mesenchymal transition in cancer. British Journal of Cancer
Staquicini DI, Tang FHF, Markosian C, et al. (2021) Design and proof-of-concept for targeted phage-based COVID-19 vaccination strategies with a streamlined cold-free supply chain. Biorxiv : the Preprint Server For Biology
Dutta M, Gilbert SP, Onuchic JN, et al. (2021) Mechanistic basis of propofol-induced disruption of kinesin processivity. Proceedings of the National Academy of Sciences of the United States of America. 118
Kohar V, Gordin D, Katebi A, et al. (2020) Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. Bioinformatics (Oxford, England)
Oliveira Junior AB, Contessoto VG, Mello MF, et al. (2020) A Scalable Computational Approach for Simulating Complexes of Multiple Chromosomes. Journal of Molecular Biology
Cheng RR, Contessoto V, Lieberman-Aiden E, et al. (2020) Exploring chromosomal structural heterogeneity across multiple cell lines. Elife. 9
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