Achillefs Kapanidis
Affiliations: | University of Oxford, Oxford, United Kingdom |
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"Achillefs Kapanidis"Parents
Sign in to add mentor| Tung-Ching Lee | research assistant | 1993-1994 | Rutgers, New Brunswick (Chemistry Tree) |
| Richard H. Ebright | grad student | 1999 | Rutgers, New Brunswick |
| Shimon Weiss | post-doc | 1999-2001 | LBNL (Chemistry Tree) |
Children
Sign in to add trainee| Thorben Cordes | post-doc | 2010-2011 | Oxford (Chemistry Tree) |
| David Dulin | post-doc | 2014-2016 | Oxford (Physics Tree) |
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Publications
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| Ploetz E, Ambrose B, Barth A, et al. (2023) A new twist on PIFE: photoisomerisation-related fluorescence enhancement. Methods and Applications in Fluorescence |
| McMahon A, Andrews R, Groves D, et al. (2023) High-throughput super-resolution analysis of influenza virus pleomorphism reveals insights into viral spatial organization. Plos Pathogens. 19: e1011484 |
| Kümmerlin M, Mazumder A, Kapanidis AN. (2023) Bleaching-resistant, Near-continuous Single-molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. e202300175 |
| Agam G, Gebhardt C, Popara M, et al. (2023) Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins. Nature Methods |
| Ploetz E, Ambrose B, Barth A, et al. (2023) A new twist on PIFE: photoisomerisation-related fluorescence enhancement. Arxiv |
| Evans GW, Craggs T, Kapanidis AN. (2021) The rate-limiting step of DNA synthesis by DNA polymerase occurs in the fingers-closed conformation. Journal of Molecular Biology. 167410 |
| Malinen AM, Bakermans J, Aalto-Setälä E, et al. (2021) Real-Time Single-Molecule Studies of RNA Polymerase-Promoter Open Complex Formation Reveal Substantial Heterogeneity Along the Promoter-Opening Pathway. Journal of Molecular Biology. 434: 167383 |
| Mazumder A, Ebright RH, Kapanidis AN. (2021) Transcription initiation at a consensus bacterial promoter proceeds via a 'bind-unwind-load-and-lock' mechanism. Elife. 10 |
| Lerner E, Barth A, Hendrix J, et al. (2021) FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices. Elife. 10 |
| Mazumder A, Wang A, Uhm H, et al. (2021) RNA polymerase clamp conformational dynamics: long-lived states and modulation by crowding, cations, and nonspecific DNA binding. Nucleic Acids Research |