Marcin J. Skwark, Ph.D.

Affiliations: 
2017-pres Biochemistry University of Cambridge, Cambridge, England, United Kingdom 
Area:
protein structure prediction, bioinformatics, drug discovery
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"Marcin J. Skwark"
Mean distance: 12.84
 
SNBCP
Cross-listing: Computational Biology Tree - Chemistry Tree

Parents

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Arne Elofsson grad student 2008-2013 Stockholm University (Chemistry Tree)
Tom Blundell post-doc 2017-pres Cambridge (Computational Biology Tree)
Erik Aurell post-doc 2013-2015 Aalto University
Jens Meiler post-doc 2015-2017 Vanderbilt (Computational Biology Tree)
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Publications

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Teixeira PL, Mendenhall JL, Heinze S, et al. (2017) Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning. Plos One. 12: e0177866
Michel M, Skwark MJ, Menéndez Hurtado D, et al. (2017) Predicting accurate contacts in thousands of Pfam domain families using PconsC3. Bioinformatics (Oxford, England)
Skwark MJ, Croucher NJ, Puranen S, et al. (2017) Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis. Plos Genetics. 13: e1006508
Borza CM, Su Y, Tran TL, et al. (2016) Discoidin domain receptor 1 kinase activity is required for regulating collagen IV synthesis. Matrix Biology : Journal of the International Society For Matrix Biology
Skwark MJ, Raimondi D, Michel M, et al. (2014) Improved contact predictions using the recognition of protein like contact patterns. Plos Computational Biology. 10: e1003889
Feinauer C, Skwark MJ, Pagnani A, et al. (2014) Improving contact prediction along three dimensions. Plos Computational Biology. 10: e1003847
Michel M, Hayat S, Skwark MJ, et al. (2014) PconsFold: improved contact predictions improve protein models. Bioinformatics (Oxford, England). 30: i482-8
Ge C, Gõmez-Llobregat J, Skwark MJ, et al. (2014) Membrane remodeling capacity of a vesicle-inducing glycosyltransferase Febs Journal. 281: 3667-3684
Feinauer C, Skwark MJ, Pagnani A, et al. (2014) Improving Contact Prediction along Three Dimensions Plos Computational Biology. 10
Skwark MJ, Elofsson A. (2013) PconsD: ultra rapid, accurate model quality assessment for protein structure prediction. Bioinformatics (Oxford, England). 29: 1817-8
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