Saeed Tavazoie, Ph.D.
Affiliations: | Biological Sciences, Biochemistry and Molecular Biophysics, Systems Biology | Columbia University, New York, NY | |
| 2000 | Harvard University, Cambridge, MA, United States |
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Parents
Sign in to add mentor| George M. Church | grad student | 2000 | Harvard | |
| (Experimental and computational approaches for determining the structure of transcriptional regulatory networks.) | ||||
Children
Sign in to add trainee| Hani Goodarzi | grad student | UCSF (FlyTree) | |
| ilias tagkopoulos | grad student | UC Davis Genome Center (Neurotree) | |
| Kyle R. Allison | post-doc | Georgia Tech and Emory University (Computational Biology Tree) | |
| Michael Beer | post-doc | Johns Hopkins (Physics Tree) | |
| Chang S. Chan | post-doc | Rutgers - Robert Wood Johnson Medical School (Physics Tree) | |
| Olivier Elemento | post-doc | Weill Cornell Medical School | |
| Peter L. Freddolino | post-doc | University of Michigan Medical School | |
| Anupama Khare | post-doc | NIH (NCI) | |
| Panagiotis Oikonomou | post-doc | Columbia (Physics Tree) | |
| Noam Slonim | post-doc | IBM HRL (Neurotree) |
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Publications
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| Ketcham A, Freddolino PL, Tavazoie S. (2022) Intracellular acidification is a hallmark of thymineless death in E. coli. Plos Genetics. 18: e1010456 |
| Freddolino PL, Amemiya HM, Goss TJ, et al. (2022) Correction: Dynamic landscape of protein occupancy across the Escherichia coli chromosome. Plos Biology. 20: e3001557 |
| Freddolino PL, Amemiya HM, Goss TJ, et al. (2021) Dynamic landscape of protein occupancy across the Escherichia coli chromosome. Plos Biology. 19: e3001306 |
| Freddolino PL, Amemiya HM, Goss TJ, et al. (2021) Dynamic landscape of protein occupancy across the Escherichia coli chromosome. Plos Biology. 19: e3001306 |
| Momen-Roknabadi A, Oikonomou P, Zegans M, et al. (2020) An inducible CRISPR interference library for genetic interrogation of Saccharomyces cerevisiae biology. Communications Biology. 3: 723 |
| Blattman SB, Jiang W, Oikonomou P, et al. (2020) Prokaryotic single-cell RNA sequencing by in situ combinatorial indexing. Nature Microbiology |
| Jiang W, Oikonomou P, Tavazoie S. (2020) Comprehensive Genome-wide Perturbations via CRISPR Adaptation Reveal Complex Genetics of Antibiotic Sensitivity. Cell |
| Khare A, Tavazoie S. (2020) Extreme Antibiotic Persistence via Heterogeneity-Generating Mutations Targeting Translation. Msystems. 5 |
| Vejnar CE, Abdelmessih M, Takacs C, et al. (2019) Genome wide analysis of 3'-UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish. Genome Research |
| Masoudi N, Tavazoie S, Glenwinkel L, et al. (2018) Unconventional function of an Achaete-Scute homolog as a terminal selector of nociceptive neuron identity. Plos Biology. 16: e2004979 |