| Year |
Citation |
Score |
| 2015 |
Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, et al. Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831. PMID 26467284 DOI: 10.15252/Msb.20156157 |
0.565 |
|
| 2013 |
Lewis NE, Liu X, Li Y, Nagarajan H, Yerganian G, O'Brien E, Bordbar A, Roth AM, Rosenbloom J, Bian C, Xie M, Chen W, Li N, Baycin-Hizal D, Latif H, ... ... Famili I, et al. Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome. Nature Biotechnology. 31: 759-65. PMID 23873082 DOI: 10.1038/Nbt.2624 |
0.704 |
|
| 2011 |
Bordbar A, Feist AM, Usaite-Black R, Woodcock J, Palsson BO, Famili I. A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology. Bmc Systems Biology. 5: 180. PMID 22041191 DOI: 10.1186/1752-0509-5-180 |
0.757 |
|
| 2011 |
Xu X, Nagarajan H, Lewis NE, Pan S, Cai Z, Liu X, Chen W, Xie M, Wang W, Hammond S, Andersen MR, Neff N, Passarelli B, Koh W, Fan HC, ... ... Famili I, et al. The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line. Nature Biotechnology. 29: 735-41. PMID 21804562 DOI: 10.1038/Nbt.1932 |
0.759 |
|
| 2009 |
Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R. Genome-scale constraint-based modeling of Geobacter metallireducens. Bmc Systems Biology. 3: 15. PMID 19175927 DOI: 10.1186/1752-0509-3-15 |
0.591 |
|
| 2006 |
Reed JL, Famili I, Thiele I, Palsson BO. Towards multidimensional genome annotation. Nature Reviews. Genetics. 7: 130-41. PMID 16418748 DOI: 10.1038/Nrg1769 |
0.715 |
|
| 2005 |
Famili I, Mahadevan R, Palsson BO. k-Cone analysis: determining all candidate values for kinetic parameters on a network scale. Biophysical Journal. 88: 1616-25. PMID 15626710 DOI: 10.1529/Biophysj.104.050385 |
0.53 |
|
| 2005 |
Mahadevan R, Burgard AP, Famili I, Van Dien S, Schilling CH. Applications of metabolic modeling to drive bioprocess development for the production of value-added chemicals Biotechnology and Bioprocess Engineering. 10: 408-417. DOI: 10.1007/Bf02989823 |
0.633 |
|
| 2004 |
Wiback SJ, Famili I, Greenberg HJ, Palsson BØ. Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space. Journal of Theoretical Biology. 228: 437-47. PMID 15178193 DOI: 10.1016/J.Jtbi.2004.02.006 |
0.749 |
|
| 2003 |
Covert MW, Famili I, Palsson BO. Identifying constraints that govern cell behavior: a key to converting conceptual to computational models in biology? Biotechnology and Bioengineering. 84: 763-72. PMID 14708117 DOI: 10.1002/Bit.10849 |
0.675 |
|
| 2003 |
Famili I, Forster J, Nielsen J, Palsson BO. Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network. Proceedings of the National Academy of Sciences of the United States of America. 100: 13134-9. PMID 14578455 DOI: 10.1073/Pnas.2235812100 |
0.784 |
|
| 2003 |
Förster J, Famili I, Palsson BO, Nielsen J. Large-scale evaluation of in silico gene deletions in Saccharomyces cerevisiae. Omics : a Journal of Integrative Biology. 7: 193-202. PMID 14506848 DOI: 10.1089/153623103322246584 |
0.744 |
|
| 2003 |
Famili I, Palsson BO. Systemic metabolic reactions are obtained by singular value decomposition of genome-scale stoichiometric matrices. Journal of Theoretical Biology. 224: 87-96. PMID 12900206 DOI: 10.1016/S0022-5193(03)00146-2 |
0.602 |
|
| 2003 |
Famili I, Palsson BO. The convex basis of the left null space of the stoichiometric matrix leads to the definition of metabolically meaningful pools. Biophysical Journal. 85: 16-26. PMID 12829460 DOI: 10.1016/S0006-3495(03)74450-6 |
0.506 |
|
| 2003 |
Förster J, Famili I, Fu P, Palsson BØ, Nielsen J. Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network. Genome Research. 13: 244-53. PMID 12566402 DOI: 10.1101/Gr.234503 |
0.749 |
|
| 2003 |
Price ND, Reed JL, Papin JA, Famili I, Palsson BO. Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices. Biophysical Journal. 84: 794-804. PMID 12547764 DOI: 10.1016/S0006-3495(03)74899-1 |
0.777 |
|
| 2002 |
Price ND, Famili I, Beard DA, Palsson BØ. Extreme pathways and Kirchhoff's second law. Biophysical Journal. 83: 2879-82. PMID 12425318 DOI: 10.1016/S0006-3495(02)75297-1 |
0.716 |
|
| 2002 |
Schilling CH, Covert MW, Famili I, Church GM, Edwards JS, Palsson BO. Genome-scale metabolic model of Helicobacter pylori 26695. Journal of Bacteriology. 184: 4582-93. PMID 12142428 DOI: 10.1128/Jb.184.16.4582-4593.2002 |
0.809 |
|
| 2001 |
Covert MW, Schilling CH, Famili I, Edwards JS, Goryanin II, Selkov E, Palsson BO. Metabolic modeling of microbial strains in silico. Trends in Biochemical Sciences. 26: 179-86. PMID 11246024 DOI: 10.1016/S0968-0004(00)01754-0 |
0.802 |
|
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