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Daniel J. Mandell, Ph.D. - Publications

Institution:
University of California, San Francisco, San Francisco, CA
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Glasgow AA, Huang YM, Mandell DJ, Thompson M, Ritterson R, Loshbaugh AL, Pellegrino J, Krivacic C, Pache RA, Barlow KA, Ollikainen N, Jeon D, Kelly MJS, Fraser JS, Kortemme T. Computational design of a modular protein sense-response system. Science (New York, N.Y.). 366: 1024-1028. PMID 31754004 DOI: 10.1126/Science.Aax8780  0.475
2015 Feng J, Jester BW, Tinberg CE, Mandell DJ, Antunes MS, Chari R, Morey KJ, Rios X, Medford JI, Church GM, Fields S, Baker D. A general strategy to construct small molecule biosensors in eukaryotes. Elife. 4. PMID 26714111 DOI: 10.7554/Elife.10606  0.434
2015 Mandell DJ, Lajoie MJ, Mee MT, Takeuchi R, Kuznetsov G, Norville JE, Gregg CJ, Stoddard BL, Church GM. Corrigendum: Biocontainment of genetically modified organisms by synthetic protein design. Nature. 527: 264. PMID 26416745 DOI: 10.1038/Nature15536  0.326
2015 Feng J, Jester BW, Tinberg CE, Mandell DJ, Antunes MS, Chari R, Morey KJ, Rios X, Medford JI, Church GM, Fields S, Baker D. Author response: A general strategy to construct small molecule biosensors in eukaryotes Elife. DOI: 10.7554/Elife.10606.018  0.365
2011 Chao LH, Stratton MM, Lee IH, Rosenberg OS, Levitz J, Mandell DJ, Kortemme T, Groves JT, Schulman H, Kuriyan J. A mechanism for tunable autoinhibition in the structure of a human Ca2+/calmodulin- dependent kinase II holoenzyme. Cell. 146: 732-45. PMID 21884935 DOI: 10.1016/J.Cell.2011.07.038  0.523
2011 Babor M, Mandell DJ, Kortemme T. Assessment of flexible backbone protein design methods for sequence library prediction in the therapeutic antibody Herceptin-HER2 interface. Protein Science : a Publication of the Protein Society. 20: 1082-9. PMID 21465611 DOI: 10.1002/Pro.632  0.609
2011 Leaver-Fay A, Tyka M, Lewis SM, Lange OF, Thompson J, Jacak R, Kaufman K, Renfrew PD, Smith CA, Sheffler W, Davis IW, Cooper S, Treuille A, Mandell DJ, Richter F, et al. ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules. Methods in Enzymology. 487: 545-74. PMID 21187238 DOI: 10.1016/B978-0-12-381270-4.00019-6  0.585
2009 Mandell DJ, Kortemme T. Computer-aided design of functional protein interactions. Nature Chemical Biology. 5: 797-807. PMID 19841629 DOI: 10.1038/Nchembio.251  0.68
2009 Mandell DJ, Kortemme T. Backbone flexibility in computational protein design. Current Opinion in Biotechnology. 20: 420-8. PMID 19709874 DOI: 10.1016/J.Copbio.2009.07.006  0.667
2009 Mandell DJ, Coutsias EA, Kortemme T. Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling. Nature Methods. 6: 551-2. PMID 19644455 DOI: 10.1038/Nmeth0809-551  0.559
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